miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 103 bits (52), Expect = 4e-22
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 9 tccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgcttta 68
||||| ||||||||||||||||||||||||||||||||||||| ||||||||| || |
Sbjct: 86 tcccttcgtaaactaatataagagcatttagaacactattttagtaatctaaatactctt 27
Query: 69 atattagttgacagagggag 88
||||||||| ||||||||||
Sbjct: 26 atattagtttacagagggag 7
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttaga 40
||||||||| ||||||||||||||||| |||||||
Sbjct: 5 tactccctctgtaaactaatataagagtatttaga 39
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 101 bits (51), Expect = 2e-21
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
||||||| | |||||||||||||| |||||||||||||||| |||| |||||||||||||
Sbjct: 89 tactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgct 30
Query: 66 ttaatattagttgacagagggag 88
| ||||||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggag 7
Score = 56.0 bits (28), Expect = 8e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 5 ctactccctccgtaaactaatataagagcatttaga 40
|||||||||| |||||||||||||||||| ||||||
Sbjct: 4 ctactccctctgtaaactaatataagagcgtttaga 39
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 75/84 (89%)
Strand = Plus / Minus
Query: 5 ctactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgc 64
||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| |
Sbjct: 90 ctactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacac 31
Query: 65 tttaatattagttgacagagggag 88
| | ||||| ||| | ||||||||
Sbjct: 30 tcttatattggtttatagagggag 7
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| |||
Sbjct: 5 tactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgct 64
Query: 66 ttaatattagtt 77
| |||||||||
Sbjct: 65 cttatattagtt 76
Score = 69.9 bits (35), Expect = 6e-12
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
|||||||||| |||||||||||||||||||||||| | || || | ||||||| |||
Sbjct: 89 tactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgct 30
Query: 66 ttaatattagttgacagagggag 88
|| ||||||||| ||||||||||
Sbjct: 29 tttatattagtttacagagggag 7
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 95.6 bits (48), Expect = 1e-19
Identities = 75/83 (90%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
|||||||||||||||||||||||||||| |||||| ||||||||| | |||||||| ||
Sbjct: 87 tactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacact 30
Query: 66 ttaatattagttgacagagggag 88
|| ||||||||| ||||||||||
Sbjct: 29 tttatattagtttacagagggag 7
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 93.7 bits (47), Expect = 4e-19
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
||||||||| |||||||||||||||| | |||||| |||||||||| || ||||||||||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 66 ttaatattagttgacagagggag 88
|| ||||||||| || |||||||
Sbjct: 29 tttatattagtttacggagggag 7
Score = 69.9 bits (35), Expect = 6e-12
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
|||||||||||||||||||||||| ||| ||||||| |||| || | ||||||||| |
Sbjct: 5 tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64
Query: 66 ttaatattagttgacagagggag 88
| ||||||||| ||||||||||
Sbjct: 65 cttatattagtttacagagggag 87
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 93.7 bits (47), Expect = 4e-19
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
|||||||||||||||||||||||||||| |||||| ||||||||| | ||||||| |||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 66 ttaatattagttgacagagggag 88
| ||||||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggag 7
Score = 85.7 bits (43), Expect = 9e-17
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
||||||||| ||||||||||||||||||||||||| ||||| || |||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 66 ttaatattagttgacagagggag 88
| ||||||||| || |||||||
Sbjct: 65 cttatattagtttacggagggag 87
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 93.7 bits (47), Expect = 4e-19
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
||||||||| |||||||||||||||||| |||||| |||||||||| || ||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 66 ttaatattagttgacagagggag 88
| ||||||||| || |||||||
Sbjct: 65 cttatattagtttacggagggag 87
Score = 87.7 bits (44), Expect = 2e-17
Identities = 74/84 (88%)
Strand = Plus / Minus
Query: 5 ctactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgc 64
||||||||||||||||||||||||||||| ||||||| |||| || | ||||||||||
Sbjct: 90 ctactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgc 31
Query: 65 tttaatattagttgacagagggag 88
| | ||||||||| ||||||||||
Sbjct: 30 tcttatattagtttacagagggag 7
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 89.7 bits (45), Expect = 6e-18
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 ctactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgc 64
|||||||||||||||||||||||||||||||||||| ||||| ||| | ||||||| ||
Sbjct: 88 ctactccctccgtaaactaatataagagcatttagatcacta-cttagtgatctaaatgc 30
Query: 65 tttaatattagttgacagagg 85
||| ||||||||| |||||||
Sbjct: 29 ttttatattagtttacagagg 9
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 11 cctccgtaaactaatataagagcatttagaacacta 46
|||| |||||||||||||| |||||||||| |||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcacta 44
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 87.7 bits (44), Expect = 2e-17
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 5 ctactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgc 64
|||||||||||||||||||||||||||| |||||| |||||||||||| || |||| ||
Sbjct: 4 ctactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgc 63
Query: 65 tttaatattagttgacagagggag 88
| | ||||||||| || |||||||
Sbjct: 64 tcttatattagtttaccgagggag 87
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 5 ctactccctccgtaaactaatataagagcattta 38
|||||||||| |||||||||||||||||||||||
Sbjct: 90 ctactccctcggtaaactaatataagagcattta 57
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 87.7 bits (44), Expect = 2e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
||||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcacta-cttaatgatctaaacgct 30
Query: 66 ttaatattagtt 77
|| |||||||||
Sbjct: 29 tttatattagtt 18
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 85.7 bits (43), Expect = 9e-17
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
|||| |||| ||||||||||||||||||||||||| |||||||||| | | |||||||||
Sbjct: 89 tacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgct 30
Query: 66 ttaatattagttgacagagggag 88
| ||||||||| || |||||||
Sbjct: 29 cttatattagtttacggagggag 7
Score = 63.9 bits (32), Expect = 3e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
|||||||||||||||||||||||||||| ||||| ||||| || | ||||||| |||
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64
Query: 66 ttaatattagttgacagagg 85
| ||||||||| |||||||
Sbjct: 65 cttatattagtttacagagg 84
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 85.7 bits (43), Expect = 9e-17
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
|||||||||||||||||||||||| | ||||| |||| ||||||| |||| |||| |||
Sbjct: 89 tactccctccgtaaactaatataaaattatttaaaacattattttagtaatttaaatgct 30
Query: 66 ttaatattagttgacagagggag 88
|| ||||||||| ||||||||||
Sbjct: 29 tttatattagtttacagagggag 7
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcattta 38
||||||||| |||||||||||||| ||||||||
Sbjct: 5 tactccctctgtaaactaatataaaagcattta 37
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 85.7 bits (43), Expect = 9e-17
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
|||||||||| |||||||||||||||||||||||||||||| || | ||||||||| | |
Sbjct: 89 tactccctccataaactaatataagagcatttagaacactacttcagtaatctaaatgtt 30
Query: 66 ttaatattagttgacagagggag 88
| ||||||||| || |||||||
Sbjct: 29 cttatattagtttacggagggag 7
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttaga 40
|||||||||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtaaactaatataagaacatttaga 39
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 83.8 bits (42), Expect = 4e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 11 cctccgtaaactaatataagagcatttagaacactattttaataatctaaacgctttaat 70
||||||||||||||||||||||| |||||| |||||||||| | ||| ||||||| | ||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 71 attagttgacagagggag 88
|||| || ||||||||||
Sbjct: 24 attaatttacagagggag 7
Score = 56.0 bits (28), Expect = 8e-08
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 2 tttctactccctccgtaaactaatataagagcatttagaacactattttaataatctaaa 61
||||||||||||| ||||| |||||||||||| ||| || ||||| || | |||||||
Sbjct: 1 tttctactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaa 60
Query: 62 cgctttaatattagtt 77
|||| | |||||||||
Sbjct: 61 cgctcttatattagtt 76
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 81.8 bits (41), Expect = 1e-15
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 7 actccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgctt 66
|||||||||||||||||||||||||| |||||| ||| |||||||| |||| ||||||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 67 taatattagttgacagaggga 87
| ||||||||| ||| |||||
Sbjct: 28 ttatattagtttacaaaggga 8
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 79.8 bits (40), Expect = 6e-15
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 9 tccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgcttta 68
||||||||||||||||||||||||| ||||||| |||| |||| ||||||| |||||
Sbjct: 8 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67
Query: 69 atattagttgacagagggag 88
||||||||| ||| ||||||
Sbjct: 68 atattagtttacaaagggag 87
Score = 67.9 bits (34), Expect = 2e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
|||||||| |||||||||||||| |||||||||| || || |||| || ||||||||||
Sbjct: 89 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 30
Query: 66 ttaatattagttgacagaggga 87
| ||||||||| || ||||||
Sbjct: 29 cttatattagtttacggaggga 8
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 79.8 bits (40), Expect = 6e-15
Identities = 73/83 (87%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
|||||||||||||||||||||||| ||| |||||| ||||||||| | |||||||| ||
Sbjct: 87 tactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacact 30
Query: 66 ttaatattagttgacagagggag 88
| ||||||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggag 7
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagag 32
||||||||| |||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagag 31
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 77.8 bits (39), Expect = 2e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
||||||||||||||| ||||||||||| ||| || |||||||||| | |||||||||||
Sbjct: 5 tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 64
Query: 66 ttaatattagttgacagagggag 88
| ||||||||| || |||||||
Sbjct: 65 cttatattagtttactgagggag 87
Score = 56.0 bits (28), Expect = 8e-08
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 7 actccctccgtaaactaatataagagcatttagaacacta 46
|||||||| |||||||||||||||||| |||||| |||||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcacta 49
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 77.8 bits (39), Expect = 2e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
||||||||| |||||||||||||||||| ||||| ||||| |||| | |||||| ||||
Sbjct: 5 tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64
Query: 66 ttaatattagttgacagagggag 88
| ||||||||| ||||||||||
Sbjct: 65 cttatattagtttacagagggag 87
Score = 67.9 bits (34), Expect = 2e-11
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 4 tctactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacg 63
||||||||||| |||||||||||||||||| ||||| ||||| || | |||||| ||
Sbjct: 91 tctactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcg 32
Query: 64 ctttaatattagttgacagagggagaattt 93
|| | ||||||||| |||||||||| ||||
Sbjct: 31 ctcttatattagtttacagagggagtattt 2
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 77.8 bits (39), Expect = 2e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
||||||||||||||||||||||||||| |||||| |||| |||| | ||||||| | |
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 66 ttaatattagttgacagagggag 88
|| ||||||||| ||||||||||
Sbjct: 65 tttatattagtttacagagggag 87
Score = 61.9 bits (31), Expect = 1e-09
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
||||||||| |||||||||||||| | |||||||| ||||| || |||||||||| ||
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30
Query: 66 ttaatattagttgacagagggag 88
| ||||||||| || |||||||
Sbjct: 29 cttatattagtttacggagggag 7
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 77.8 bits (39), Expect = 2e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
||||||||| ||||||||||||||||| |||||| ||||| |||| |||| |||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64
Query: 66 ttaatattagttgacagagggag 88
|| ||||||||| ||||||||||
Sbjct: 65 tttatattagtttacagagggag 87
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 77.8 bits (39), Expect = 2e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 19 aactaatataagagcatttagaacactattttaataatctaaacgctttaatattagttg 78
||||||||||||||| |||||| ||||| |||| | ||||||||||| | |||||||||
Sbjct: 76 aactaatataagagcgtttagatcactactttagtgatctaaacgctcttatattagttt 17
Query: 79 acagagggagaattt 93
|||||||||| ||||
Sbjct: 16 acagagggagtattt 2
Score = 63.9 bits (32), Expect = 3e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
||||||||| |||||||||||||||||| |||||| ||||| || | |||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 64
Query: 66 ttaatattagtt 77
| |||||||||
Sbjct: 65 cttatattagtt 76
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 20 actaatataagagcatttagaacactattttaataatctaaacgctttaatattagttga 79
|||||||||||||| |||||| |||||||||||| ||||||| ||| | ||||||||| |
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 80 cagagggag 88
| |||||||
Sbjct: 124 cggagggag 132
Score = 69.9 bits (35), Expect = 6e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttaga 40
|||||||||||||||||||||||||||||||||||
Sbjct: 134 tactccctccgtaaactaatataagagcatttaga 100
Score = 58.0 bits (29), Expect = 2e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaac 62
||||||||| |||||||||||||||||| ||||| || |||||||| ||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttaggtcataattttaatgatctaaac 61
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 69.9 bits (35), Expect = 6e-12
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
||||||||||||||| |||||||||||| |||||| |||| |||| | |||||||||||
Sbjct: 5 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64
Query: 66 ttaatattagttgacagagggag 88
| ||| ||||| ||||| ||||
Sbjct: 65 cttatagtagtttacagacggag 87
Score = 58.0 bits (29), Expect = 2e-08
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 4 tctactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacg 63
|||||||| || |||||||| ||||||||| |||||| ||||| || |||||||||||
Sbjct: 91 tctactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacg 32
Query: 64 ctttaatattagttgacagagggag 88
|| | |||||| || || |||||||
Sbjct: 31 ctcttatattaatttacggagggag 7
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 67.9 bits (34), Expect = 2e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
||||||||| |||||||||||||||| | |||||| ||||| |||| | ||||||| | |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30
Query: 66 ttaatattagttgacagaggga 87
| ||||||||| |||||||||
Sbjct: 29 cttatattagtttacagaggga 8
Score = 48.1 bits (24), Expect = 2e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 9 tccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgcttta 68
|||||| |||||||||||||||| | |||||| ||||| || | ||||||| | | |
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 67
Query: 69 atattagttgacagagggag 88
||||||||| ||||||||||
Sbjct: 68 atattagtttacagagggag 87
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 63.9 bits (32), Expect = 3e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaa 61
||||||||| ||||||||||||||||||||| ||| ||||| |||| | |||||||
Sbjct: 5 tactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaa 60
Score = 61.9 bits (31), Expect = 1e-09
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
||||||||||||||| |||||||||||||||||| ||||| || | |||| || |||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30
Query: 66 ttaatattagttgacagagggag 88
| ||||||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggag 7
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 60.0 bits (30), Expect = 5e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 5 ctactccctccgtaaactaatataagagcatttagaacacta 46
|||| ||||| ||||||||||||||||||||||||| |||||
Sbjct: 4 ctaccccctctgtaaactaatataagagcatttagatcacta 45
Score = 50.1 bits (25), Expect = 5e-06
Identities = 73/88 (82%), Gaps = 7/88 (7%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagag-----catttaga--acactattttaataatct 58
||||||||| ||||||||||||||||| |||||||| |||||||||| | ||||
Sbjct: 96 tactccctctgtaaactaatataagagcgtttcatttagatctcactattttagtgatct 37
Query: 59 aaacgctttaatattagttgacagaggg 86
||| ||| | ||||||||| ||||||||
Sbjct: 36 aaatgctcttatattagtttacagaggg 9
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttagaacacta 46
||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 5 tactccctctgtaaactaatataagagcttttagatcacta 45
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttaga 40
|||||||||| ||||||||||||||||| ||||||
Sbjct: 96 tactccctccttaaactaatataagagcgtttaga 62
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 5 ctactccctccgtaaactaatataagagc 33
|||||||||||||||||||||||||||||
Sbjct: 63 ctactccctccgtaaactaatataagagc 35
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagca 34
||||||||| |||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagca 33
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 56.0 bits (28), Expect = 8e-08
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 9 tccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgcttta 68
|||||| ||||| ||||||||||| |||||| |||||||||| |||||||||| |
Sbjct: 86 tccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacgccctt 27
Query: 69 atattagttgacagagggag 88
||||| ||| ||||||||||
Sbjct: 26 atatttgtttacagagggag 7
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacacta 46
||||||||| |||||||||||||||| | |||||| |||||
Sbjct: 91 tactccctctgtaaactaatataagaccttttagatcacta 51
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 9 tccctccgtaaactaatataagagcatttagaacacta 46
|||||| |||||||||||||||| | |||||| |||||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcacta 45
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagc 33
||||||||| ||||||||||||||||||
Sbjct: 74 tactccctcggtaaactaatataagagc 47
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagag 32
||||||||| |||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagag 31
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcatttag 39
||||||||||||||| ||||||||||| |||||
Sbjct: 5 tactccctccgtaaagaaatataagagcgtttag 38
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcatttagaacactat 47
||||||||| ||||| ||||||||||| |||||| ||||||
Sbjct: 83 tactccctctgtaaagaaatataagagcgtttagatcactat 42
