miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q941I2|KAN3_ARATH Probable transcription factor KAN3
OS=Arabidopsis thaliana GN=KAN3 PE=2 SV=1
Length = 322
Score = 61.2 bits (147), Expect = 2e-09
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +1
Query: 43 MSWTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILRCL 201
M WTT LH FV V LGG+ERA K VL+L++++ T+ HVKSHLQ+ R +
Sbjct: 167 MRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYRTI 219
>sp|Q9FJV5|KAN4_ARATH Probable transcription factor KAN4
OS=Arabidopsis thaliana GN=KAN4 PE=1 SV=1
Length = 276
Score = 60.8 bits (146), Expect = 2e-09
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +1
Query: 43 MSWTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
M WT+ LH FV V LGG+ERA K VL+L+N++ T+ HVKSHLQ+ R
Sbjct: 108 MRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYR 158
>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2
OS=Arabidopsis thaliana GN=KAN2 PE=2 SV=1
Length = 388
Score = 59.7 bits (143), Expect = 6e-09
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +1
Query: 43 MSWTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
M WTT LH FV V LGG+ERA K VL+L++++ T+ HVKSHLQ+ R
Sbjct: 216 MRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 266
>sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1 OS=Arabidopsis
thaliana GN=KAN1 PE=2 SV=1
Length = 403
Score = 58.5 bits (140), Expect = 1e-08
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 43 MSWTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
M WT+ LH FV V LGG+ERA K VL+L++++ T+ HVKSHLQ+ R
Sbjct: 222 MRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 272
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL
OS=Arabidopsis thaliana GN=APL PE=2 SV=2
Length = 358
Score = 58.5 bits (140), Expect = 1e-08
Identities = 24/51 (47%), Positives = 37/51 (72%)
Frame = +1
Query: 43 MSWTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
+ WT ELHE FV+ V QLGG ++A K +++++ ++ T+YH+KSHLQ R
Sbjct: 37 LRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFR 87
>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza
sativa subsp. japonica GN=RL9 PE=2 SV=2
Length = 532
Score = 58.2 bits (139), Expect = 2e-08
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 43 MSWTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
M WT+ LH FV V LGG+ERA K VL+L++++ T+ HVKSHLQ+ R
Sbjct: 327 MRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 377
>sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor
At1g14600 OS=Arabidopsis thaliana GN=At1g14600 PE=2 SV=2
Length = 255
Score = 55.5 bits (132), Expect = 1e-07
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +1
Query: 43 MSWTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
+ WT ELH FV V+ LGG +A K VLK+++++ TI HVKSHLQ+ R
Sbjct: 26 LRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYR 76
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12
OS=Arabidopsis thaliana GN=ARR12 PE=2 SV=1
Length = 596
Score = 48.9 bits (115), Expect = 1e-05
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +1
Query: 49 WTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
WT ELH+ FV VNQLG E+A+ K +L L+N+E T +V SHLQ R
Sbjct: 200 WTVELHKKFVAAVNQLG-YEKAMPKKILDLMNVEKLTRENVASHLQKFR 247
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1
OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2
Length = 690
Score = 46.2 bits (108), Expect = 6e-05
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +1
Query: 49 WTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
W+ ELH+ FV VNQL G E+A+ K +L+L+N+ T +V SHLQ R
Sbjct: 242 WSVELHQQFVAAVNQL-GVEKAVPKKILELMNVPGLTRENVASHLQKYR 289
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis
thaliana GN=GLK2 PE=2 SV=1
Length = 386
Score = 45.8 bits (107), Expect = 8e-05
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = +1
Query: 43 MSWTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
+ WT ELH FV+ V QL G ++A+ +L+++N++S T ++V SHLQ R
Sbjct: 150 VDWTPELHRKFVQAVEQL-GVDKAVPSRILEIMNVKSLTRHNVASHLQKYR 199
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2
OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1
Length = 664
Score = 44.3 bits (103), Expect = 2e-04
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 49 WTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
W+ ELH+ FV VNQL G ++A+ K +L+++N+ T +V SHLQ R
Sbjct: 221 WSVELHQQFVAAVNQL-GVDKAVPKKILEMMNVPGLTRENVASHLQKYR 268
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza
sativa subsp. japonica GN=GLK2 PE=2 SV=1
Length = 539
Score = 43.9 bits (102), Expect = 3e-04
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 43 MSWTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
+ WT ELH FV+ V QL G ++A+ +L+L+ IE T +++ SHLQ R
Sbjct: 218 VDWTPELHRRFVQAVEQL-GIDKAVPSRILELMGIECLTRHNIASHLQKYR 267
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza
sativa subsp. japonica GN=GLK1 PE=2 SV=1
Length = 455
Score = 43.9 bits (102), Expect = 3e-04
Identities = 21/51 (41%), Positives = 34/51 (66%)
Frame = +1
Query: 43 MSWTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
+ WT ELH FV+ V QL G ++A+ +L+++ I+S T +++ SHLQ R
Sbjct: 183 VDWTPELHRRFVQAVEQL-GIDKAVPSRILEIMGIDSLTRHNIASHLQKYR 232
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis
thaliana GN=GLK1 PE=2 SV=2
Length = 420
Score = 43.1 bits (100), Expect = 5e-04
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +1
Query: 43 MSWTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
+ WT ELH FVE V QL G ++A+ +L+L+ + T ++V SHLQ R
Sbjct: 156 VDWTPELHRRFVEAVEQL-GVDKAVPSRILELMGVHCLTRHNVASHLQKYR 205
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10
OS=Arabidopsis thaliana GN=ARR10 PE=1 SV=1
Length = 552
Score = 43.1 bits (100), Expect = 5e-04
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +1
Query: 49 WTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
WT ELH F+ V+ LG ERA+ K +L L+N++ T +V SHLQ R
Sbjct: 188 WTHELHNKFLAAVDHLGV-ERAVPKKILDLMNVDKLTRENVASHLQKFR 235
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18
OS=Arabidopsis thaliana GN=ARR18 PE=2 SV=2
Length = 635
Score = 42.7 bits (99), Expect = 7e-04
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +1
Query: 49 WTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
W+ ELH+ FV V QL G ++A+ K +L L++IE T +V SHLQ R
Sbjct: 199 WSQELHQKFVSAVQQL-GLDKAVPKKILDLMSIEGLTRENVASHLQKYR 246
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11
OS=Arabidopsis thaliana GN=ARR11 PE=1 SV=1
Length = 521
Score = 42.7 bits (99), Expect = 7e-04
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +1
Query: 49 WTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
W+ ELH FV VNQ+G + +A K +L L+N+ T +V SHLQ R
Sbjct: 198 WSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYR 246
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2
OS=Arabidopsis thaliana GN=APRR2 PE=2 SV=2
Length = 535
Score = 42.7 bits (99), Expect = 7e-04
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 43 MSWTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
+ WT ELH+ FV+ V QL G ++AI +L+L+ + + T ++V SHLQ R
Sbjct: 299 VDWTPELHKKFVQAVEQL-GVDQAIPSRILELMKVGTLTRHNVASHLQKFR 348
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza
sativa subsp. japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 42.4 bits (98), Expect = 0.001
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 43 MSWTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
++WTT+LH F+ VN L G ++A+ K +L ++ ++ T V SHLQ R
Sbjct: 201 LTWTTQLHRQFIAAVNHL-GEDKAVPKKILGIMKVKHLTREQVASHLQKYR 250
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza
sativa subsp. indica PE=2 SV=1
Length = 341
Score = 42.4 bits (98), Expect = 0.001
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 43 MSWTTELHEFFVEGVNQLGGNERAILKGVLKLINIESFTIYHVKSHLQILR 195
++WTT+LH F+ VN L G ++A+ K +L ++ ++ T V SHLQ R
Sbjct: 201 LTWTTQLHRQFIAAVNHL-GEDKAVPKKILGIMKVKHLTREQVASHLQKYR 250
