miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 216 bits (109), Expect = 1e-55
Identities = 137/145 (94%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 145 cataagtcacgagtaaagtactattcatgttttatcatcttataacaacaaaaatgctaa 86
Query: 171 ttataa-aaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgc 229
|||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 85 ttataaaaaaatttcaaataagacggacgatcaaagttaagcgcggaaacttatggctgc 26
Query: 230 atttattttggaacggaggaagtat 254
| ||||||||| |||||||||||||
Sbjct: 25 acttattttgggacggaggaagtat 1
Score = 101 bits (51), Expect = 5e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 23 ctccgtcccaaaataagtgcagccatagttttccgtgtctaattttgaccattcgtctt 81
||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 234 ctccgtcccaaaataagtgcaaccatagttttccgtgcctaattttgaccattcgtctt 176
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 23 ctccgtcccaaaataagtgcagccata 49
|||||||||||||||||||||||||||
Sbjct: 8 ctccgtcccaaaataagtgcagccata 34
Score = 46.1 bits (23), Expect = 3e-04
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgcattta 234
||||||||||||| ||||| | | ||||| || ||| |||||| ||||| |||| |||
Sbjct: 162 aaaaaatttcaaacaagacgaatggtcaaaattaggcacggaaaactatggttgcactta 221
Query: 235 ttttggaacggaggaagta 253
|||||| ||||||| ||||
Sbjct: 222 ttttgggacggagggagta 240
>RF01062;MIR812;AAAA02004016.1/1508-1676 39946:Oryza sativa Indica
Group
Length = 169
Score = 194 bits (98), Expect = 4e-49
Identities = 108/110 (98%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 cataagtcacgagtaaaatactattcatgttttatcatcttatatcaagaaaaatgctaa 119
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ttataaaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 169
Score = 73.8 bits (37), Expect = 1e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 51 ttttccgtgtctaattttgaccattcgtcttatttaa 87
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttccgtgtctaattttgaccattcgtcttatttaa 37
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 168 bits (85), Expect = 3e-41
Identities = 128/141 (90%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 114 aagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
|||||||||||||||||||||| |||||||||||||| ||| ||| ||||||||||||||
Sbjct: 142 aagtcacgagtaaagtactatttatgttttatcatctcataacaataaaaatgctaatta 83
Query: 174 taa-aaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgcatt 232
||| ||||||||||||||||| |||||||||| |||||||| |||||| |||||||| |
Sbjct: 82 taaaaaaatttcaaataagacggacgatcaaaattgggcgcagaaactcatggctgcgct 23
Query: 233 tattttggaacggaggaagta 253
|||||||| ||||||| ||||
Sbjct: 22 tattttgggacggaggtagta 2
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 23 ctccgtcccaaaataagtgcagccatagttttccgtgtctaattttgaccattcgtctta 82
|||||||||||||||||||||||||| |||||| | | | || ||||||| |||||||||
Sbjct: 234 ctccgtcccaaaataagtgcagccatggttttctgcgcccaactttgaccgttcgtctta 175
Query: 83 ttt 85
|||
Sbjct: 174 ttt 172
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 181 tttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgcatttattttgg 240
||||||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||
Sbjct: 168 tttcaaataagacgaacggtcaaagttgggcgcagaaaaccatggctgcacttattttgg 227
Query: 241 aacggaggaagta 253
||||||| ||||
Sbjct: 228 gacggagggagta 240
>RF01062;MIR812;AAAA02004189.1/13863-13695 39946:Oryza sativa Indica
Group
Length = 169
Score = 167 bits (84), Expect = 1e-40
Identities = 102/108 (94%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 62 ataagtcacgagtaaagtactattcatgttttatcatcttataacaacaaaaatgctaat 121
Query: 172 tataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||||| ||||||||| |||||| |||||||| |||||||||
Sbjct: 122 tataaaaaattttaaataagacggacgattaaagttggacgcggaaac 169
>RF01058;MIR806;AACV01005957.1/12052-12292 39947:Oryza sativa
Japonica Group
Length = 241
Score = 167 bits (84), Expect = 1e-40
Identities = 130/144 (90%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||
Sbjct: 145 cataagtcacgagtaaagtattattcatgttttatcatcttataacaacaaaaatgctaa 86
Query: 171 ttataa-aaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgc 229
|||||| |||||||||||||| || |||||||||||||| |||||||||| | |||||
Sbjct: 85 ttataaaaaaatttcaaataaaacgaacgatcaaagttggacgcggaaactcacggctgt 26
Query: 230 atttattttggaacggaggaagta 253
| ||||||||| ||||||| ||||
Sbjct: 25 acttattttgggacggaggtagta 2
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 25 ccgtcccaaaataagtgcagccatagttttccgtgtctaattttgaccattcgtcttatt 84
||||||||||| ||||||||||||||||||| | | | || ||||||||||| | |||||
Sbjct: 232 ccgtcccaaaacaagtgcagccatagttttcagcgcccaactttgaccattcattttatt 173
Query: 85 t 85
|
Sbjct: 172 t 172
>RF01062;MIR812;AP008212.1/25992082-25992255 39947:Oryza sativa
Japonica Group
Length = 174
Score = 163 bits (82), Expect = 2e-39
Identities = 104/110 (94%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||| ||||||||||||||| ||| |||| || |||
Sbjct: 65 cataagtcacgagtaaagtactattcatattttatcatcttataacaacaaaattgttaa 124
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ttataaaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 174
>RF01058;MIR806;AAAA02001819.1/3379-3140 39946:Oryza sativa Indica
Group
Length = 240
Score = 159 bits (80), Expect = 2e-38
Identities = 130/144 (90%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||| |||||||||||||||||| ||||||||| | ||| ||| |||||||||||
Sbjct: 144 cataagtcatgagtaaagtactattcatattttatcatttcataacaacaaaaatgctaa 85
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgc 229
|||| |||||||||||||||||||||| ||||||||||||||||| |||| |||||||||
Sbjct: 84 ttatgaaaaaatttcaaataagacagatgatcaaagttgggcgcgaaaac-tatggctgc 26
Query: 230 atttattttggaacggaggaagta 253
| |||||||| ||||||| ||||
Sbjct: 25 acttattttgagacggaggtagta 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 181 tttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgcatttattttgg 240
|||||||||||| ||| | ||||||||||||| ||| |||||||||| |||||||||
Sbjct: 167 tttcaaataagatgaacggttaaagttgggcgcgaaaaactatggctgcacttattttgg 226
Query: 241 aacggaggaagta 253
|||||||| ||||
Sbjct: 227 aacggaggtagta 239
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 23 ctccgtcccaaaataagtgcagccatagttttc 55
||||||| |||||||||||||||||||||||||
Sbjct: 8 ctccgtctcaaaataagtgcagccatagttttc 40
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 23 ctccgtcccaaaataagtgcagccatagtttt 54
|||||| |||||||||||||||||||||||||
Sbjct: 233 ctccgttccaaaataagtgcagccatagtttt 202
>RF01062;MIR812;AAHK01024291.1/515-686 5693:Trypanosoma cruzi
Length = 172
Score = 153 bits (77), Expect = 2e-36
Identities = 102/109 (93%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||
Sbjct: 62 cataagtcacgagtaaagtactattcatgttttattatcttataacaacaaaaatgctaa 121
Query: 171 ttataaaa-aatttcaaataagacagacgatcaaagttgggcgcggaaa 218
|||||||| ||||| ||||||||| |||||||||||||| |||||||||
Sbjct: 122 ttataaaataattttaaataagacggacgatcaaagttgagcgcggaaa 170
>RF01058;MIR806;AAAA02034839.1/3524-3764 39946:Oryza sativa Indica
Group
Length = 241
Score = 153 bits (77), Expect = 2e-36
Identities = 114/125 (91%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||| ||||
Sbjct: 145 cataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatactaa 86
Query: 171 ttataa-aaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgc 229
|||||| ||||||||||||||||| |||||||||| ||||| ||||||||||||| |||
Sbjct: 85 ttataaaaaaatttcaaataagacggacgatcaaaattgggtacggaaacttatggttgc 26
Query: 230 attta 234
|||||
Sbjct: 25 attta 21
Score = 52.0 bits (26), Expect = 4e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 181 tttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgcattta 234
||||||||||||| |||| |||||| || ||||| ||| ||||||||||||||
Sbjct: 168 tttcaaataagacggacggtcaaagatgtgcgcgaaaaaatatggctgcattta 221
>RF01062;MIR812;AACV01002616.1/34373-34543 39947:Oryza sativa
Japonica Group
Length = 171
Score = 151 bits (76), Expect = 6e-36
Identities = 100/108 (92%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 64 ataagtcacgagtaaagtactattcatgttttatcatcttataacaacaaaaatgctaat 123
Query: 172 tataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||||| ||||||||| | |||| |||||| |||||| ||||
Sbjct: 124 tataaaaaattttaaataagacgggcgattaaagtttggcgcgaaaac 171
>RF01058;MIR806;AAAA02016915.1/1166-927 39946:Oryza sativa Indica
Group
Length = 240
Score = 149 bits (75), Expect = 2e-35
Identities = 108/119 (90%)
Strand = Plus / Minus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||||
Sbjct: 143 ataagtcacgagtaaagtactattcatgttttatcatctcataacaataaaaatactaat 84
Query: 172 tataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgca 230
||||||||| || ||||||||| ||||| ||| |||||||||||||||||||| ||||
Sbjct: 83 tataaaaaaatttaaataagacgaacgattaaaattgggcgcggaaacttatggttgca 25
Score = 58.0 bits (29), Expect = 7e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 35 ataagtgcagccatagttttccgtgtctaattttgaccattcgtcttatttaa 87
||||||||||||||||||||||| ||| || ||| ||| | ||||||||||||
Sbjct: 221 ataagtgcagccatagttttccgcgtccaactttaaccgtccgtcttatttaa 169
>RF01058;MIR806;AP005542.3/3261-3021 39947:Oryza sativa Japonica
Group
Length = 241
Score = 149 bits (75), Expect = 2e-35
Identities = 103/111 (92%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 145 cataagtcacgagtaaagtactattcatgttttatcatctcataacaaaaaaaatactaa 86
Query: 171 ttataa-aaaatttcaaataagacagacgatcaaagttgggcgcggaaact 220
|||||| |||| |||||||||||| ||||||||||||||| ||||||||||
Sbjct: 85 ttataaaaaaaattcaaataagacggacgatcaaagttggacgcggaaact 35
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 181 tttcaaataagacagacgatcaaagttgggcgcggaaa 218
|||||||||||| ||||||||||||||||||||||||
Sbjct: 168 tttcaaataagatggacgatcaaagttgggcgcggaaa 205
>RF01062;MIR812;AAAA02026397.1/276-440 39946:Oryza sativa Indica
Group
Length = 165
Score = 147 bits (74), Expect = 9e-35
Identities = 103/112 (91%), Gaps = 3/112 (2%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||
Sbjct: 54 cataagtcacgagtaaagtactattcatgttttatcatcttataacaataaaaatactaa 113
Query: 171 ttat---aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 114 ttataaaaaaaaatttcaaataagatggacgatcaaagttggacgcggaaac 165
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 51 ttttccgtgtctaattttgaccattcgtcttattt 85
||||||||||| || ||||||||||| ||||||||
Sbjct: 1 ttttccgtgtcaaactttgaccattcatcttattt 35
>RF01062;MIR812;CR855047.1/68417-68246 4530:Oryza sativa (rice)
Length = 172
Score = 147 bits (74), Expect = 9e-35
Identities = 102/110 (92%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 63 cataagtcacgagtaaagtattattcatgttttatcatcttataataacaaaaatgctaa 122
Query: 171 ttataaaaaa-tttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| |||||||||| ||||||||||||| ||||||||| ||||
Sbjct: 123 ttataaaaaattttcaaataaaacagacgatcaaaattgggcgcgaaaac 172
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 50 gttttccgtgtctaattttgaccattcgtcttattt 85
|||||| ||| |||| ||||||||||||||||||||
Sbjct: 1 gttttcagtgcctaactttgaccattcgtcttattt 36
>RF01062;MIR812;AAAA02004388.1/22484-22653 39946:Oryza sativa Indica
Group
Length = 170
Score = 147 bits (74), Expect = 9e-35
Identities = 102/110 (92%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 61 cataagtcacaagtaaagtactattcatgttttatcatctcataacaacaaaaatgctaa 120
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| ||||||||||||||||||| |||||||||| ||| ||||||||||
Sbjct: 121 ttataaaaaaatttcaaataagacggacgatcaaaattgagcgcggaaac 170
>RF01062;MIR812;AY946463.1/200-28 4530:Oryza sativa (rice)
Length = 173
Score = 147 bits (74), Expect = 9e-35
Identities = 104/112 (92%), Gaps = 4/112 (3%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||
Sbjct: 63 cataagtcacgagtaaagtactattcatgttttatcatcttataacaataaaaatactaa 122
Query: 171 ttat---aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 123 ttataaaaaaaaatttcaaataaga-tgacgatcaaagttgggcgcggaaac 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 50 gttttccgtgtctaattttgaccattcgtcttattt 85
|||||||| ||| || ||||||||||||||||||||
Sbjct: 1 gttttccgcgtcaaactttgaccattcgtcttattt 36
>RF01062;MIR812;AAAA02017193.1/13592-13421 39946:Oryza sativa Indica
Group
Length = 172
Score = 147 bits (74), Expect = 9e-35
Identities = 99/106 (93%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 115 agtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaattat 174
|||||||||||||||| | ||||||||||||||||||||| ||| |||||| ||||||||
Sbjct: 67 agtcacgagtaaagtaattttcatgttttatcatcttataacaacaaaaatactaattat 126
Query: 175 -aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 127 aaaaaaatttcaaataagacggacgatcaaagttgggcgcggaaac 172
>RF01062;MIR812;AY946444.1/29-199 4530:Oryza sativa (rice)
Length = 171
Score = 147 bits (74), Expect = 9e-35
Identities = 102/110 (92%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||
Sbjct: 62 cataagtcacgagtaaagtactattcatattttatcatcttataataacaaaaatgctaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| ||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 122 ttataaaaaaatttcaaataagacgaacgatcaaagttggacgcggaaac 171
>RF01062;MIR812;AAAA02017731.1/13732-13902 39946:Oryza sativa Indica
Group
Length = 171
Score = 145 bits (73), Expect = 4e-34
Identities = 100/109 (91%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||| |||||||||||||||||| ||| ||| |||||||||||
Sbjct: 63 cataagtcacgagtaaagtaccattcatgttttatcatctcataacaacaaaaatgctaa 122
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||||||| |||||||| ||| ||||||||||| | |||||||
Sbjct: 123 ttataaaaaatttcgaataagacggacaatcaaagttggacacggaaac 171
>RF01062;MIR812;AP008210.1/18494792-18494961 39947:Oryza sativa
Japonica Group
Length = 170
Score = 145 bits (73), Expect = 4e-34
Identities = 101/109 (92%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatg-ttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||| |||||||| ||||||||||| ||| ||| |||||||||||
Sbjct: 62 ataagtcacgagtaaagtattattcatggttttatcatctaataacaacaaaaatgctaa 121
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| |||||||||||| ||||||||||||| |||||||||||
Sbjct: 122 ttataaaaaaattcaaataagacggacgatcaaagttaggcgcggaaac 170
>RF01062;MIR812;AP003374.3/116876-116710 39947:Oryza sativa Japonica
Group
Length = 167
Score = 143 bits (72), Expect = 1e-33
Identities = 94/100 (94%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||| |||||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 58 cataagtcaagagtaaagtactattcatgttttatcatctcataacaacaaaaatgctaa 117
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgg 209
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 118 ttataaaaaaatttcaaataagacagacgattaaagttgg 157
>RF01062;MIR812;AAAA02007290.1/11578-11749 39946:Oryza sativa Indica
Group
Length = 172
Score = 141 bits (71), Expect = 6e-33
Identities = 90/95 (94%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||
Sbjct: 63 cataagtcacgagtaaagtactattcatgttttatcatcttataacaacaaaaatactaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaa 204
|||| ||||||||||||||||||| ||||||||||
Sbjct: 123 ttataaaaaaatttcaaataagacggacgatcaaa 157
>RF01062;MIR812;ABRL01001385.1/28807-28635 65489:Oryza barthii
Length = 173
Score = 141 bits (71), Expect = 6e-33
Identities = 102/111 (91%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| ||||||| ||||||||||||||| ||| |||| ||||||
Sbjct: 63 cataagtcacgagtaaagtattattcatattttatcatcttataacaataaaactgctaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaact 220
|||| |||||||||||||||| || ||||||||||||||||||| ||||||
Sbjct: 123 ttataaaaaaatttcaaataaaacggacgatcaaagttgggcgcagaaact 173
>RF01062;MIR812;AC136148.2/41090-41260 39947:Oryza sativa Japonica
Group
Length = 171
Score = 139 bits (70), Expect = 2e-32
Identities = 101/110 (91%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||| |||| ||||||||| ||||||||| ||||||||| ||| ||| |||||||||||
Sbjct: 62 cataactcacaagtaaagtattattcatgtgttatcatctcatagcaacaaaaatgctaa 121
Query: 171 ttataaaaa-atttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 122 ttataaaaacatttcaaataagacagacgatcaaagttggacgcggaaac 171
>RF01062;MIR812;AP008207.1/26364722-26364890 39947:Oryza sativa
Japonica Group
Length = 169
Score = 139 bits (70), Expect = 2e-32
Identities = 101/110 (91%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||
Sbjct: 60 cataagtcacgagtaaagtactattcatgttttatcatcttataacaataaaaatattaa 119
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||||||||||||| |||||| ||||||||||| | |||||||
Sbjct: 120 ttataaaaaaatttcaaataaaacagactatcaaagttggacacggaaac 169
>RF01062;MIR812;AAAA02020262.1/20290-20463 39946:Oryza sativa Indica
Group
Length = 174
Score = 139 bits (70), Expect = 2e-32
Identities = 92/98 (93%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 65 cataagtcacgagtaaagtactattcatgttttatcatctcataacaataaaaatgctaa 124
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagtt 207
|||| ||||||||||||||||||| ||||||||||||
Sbjct: 125 ttataaaaaaatttcaaataagacgaacgatcaaagtt 162
>RF01062;MIR812;BX000502.2/56342-56514 4530:Oryza sativa (rice)
Length = 173
Score = 139 bits (70), Expect = 2e-32
Identities = 100/110 (90%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| |||| |||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 64 cataagtcacgcataaaatactattcatgttttatcatctcataacaacaaaaatactaa 123
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaact 220
||||||||||||||||||||||| ||||||||||||||||| | ||||||
Sbjct: 124 ttataaaaaatttcaaataagacggacgatcaaagttgggcacagaaact 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 181 tttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||||||||||| |||||||||||||| || ||||||
Sbjct: 40 tttcaaataagacggacgatcaaagttgagcacggaaa 3
>RF01062;MIR812;AP008208.1/25944725-25944560 39947:Oryza sativa
Japonica Group
Length = 166
Score = 137 bits (69), Expect = 9e-32
Identities = 94/101 (93%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 114 aagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
|||||||||||||||||||||| |||||||||||||| ||| ||| ||||||||||||||
Sbjct: 64 aagtcacgagtaaagtactatttatgttttatcatctcataacaataaaaatgctaatta 123
Query: 174 t-aaaaaatttcaaataagacagacgatcaaagttgggcgc 213
| ||||||||||||||||||| |||||||||| ||||||||
Sbjct: 124 taaaaaaatttcaaataagacggacgatcaaaattgggcgc 164
>RF01062;MIR812;AAAA02001058.1/3820-3989 39946:Oryza sativa Indica
Group
Length = 170
Score = 137 bits (69), Expect = 9e-32
Identities = 97/105 (92%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 115 agtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaattat 174
|||||||||||| |||||||||||||||||||||||||| ||| |||||| ||||||||
Sbjct: 67 agtcacgagtaagatactattcatgttttatcatcttataacaacaaaaatactaattat 126
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||| |||||||||||| |||||||||||||||||||| ||||
Sbjct: 127 aaaaaa-ttcaaataagacggacgatcaaagttgggcgcgaaaac 170
>RF01062;MIR812;AACV01018820.1/15282-15123 39947:Oryza sativa
Japonica Group
Length = 160
Score = 137 bits (69), Expect = 9e-32
Identities = 91/97 (93%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattat-aaaaaatt 182
||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||
Sbjct: 64 taaagtactattcatgttttatcatcttataacaataaaaatactaattataaaaaaatt 123
Query: 183 tcaaataagacagacgatcaaagttgggcgcggaaac 219
||||||||||| ||| |||||||||||||||||||||
Sbjct: 124 tcaaataagacggactatcaaagttgggcgcggaaac 160
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 51 ttttccgtgtctaattttgaccattcgtcttattt 85
||||||| ||| || ||||||||||||||||||||
Sbjct: 1 ttttccgcgtccaactttgaccattcgtcttattt 35
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 137 bits (69), Expect = 9e-32
Identities = 127/145 (87%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||| ||||||||||||| ||| |||||||||||| ||| ||| |||||||||||
Sbjct: 145 cataagtcaggagtaaagtactactcacgttttatcatctcataacaacaaaaatgctaa 86
Query: 171 ttataa-aaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgc 229
|||||| |||| || ||||||||| | ||||||||||| || |||||||| ||||||||
Sbjct: 85 ttataaaaaaaattaaaataagacgaatgatcaaagttgagcacggaaactcatggctgc 26
Query: 230 atttattttggaacggaggaagtat 254
| ||||||||| ||||||| |||||
Sbjct: 25 acttattttgggacggaggtagtat 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 23 ctccgtcccaaaataagtgcagccatagttttccgtgtctaattttgaccattcgtctta 82
|||||||||||||||||||||||||| |||||||| || ||||| |||||||||||
Sbjct: 8 ctccgtcccaaaataagtgcagccatgagtttccgtgctcaactttgatcattcgtctta 67
Query: 83 ttt 85
|||
Sbjct: 68 ttt 70
Score = 56.0 bits (28), Expect = 3e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 174 taaaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgcattt 233
||||||| |||||||||||| ||| ||||||||| |||| |||| || |||||| ||
Sbjct: 161 taaaaaaattcaaataagacgaacggtcaaagttgaacgcgaaaacccatagctgcactt 220
Query: 234 attttggaacggaggaagta 253
||||||| ||||||| ||||
Sbjct: 221 attttgggacggagggagta 240
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 23 ctccgtcccaaaataagtgcagccatagttttccgtgtctaattttgaccattcgtctta 82
||||||||||||||||||||||| || | ||| || || || ||||||| |||||||||
Sbjct: 234 ctccgtcccaaaataagtgcagctatgggttttcgcgttcaactttgaccgttcgtctta 175
Query: 83 ttt 85
|||
Sbjct: 174 ttt 172
>RF01062;MIR812;AAAA02007013.1/4435-4263 39946:Oryza sativa Indica
Group
Length = 173
Score = 135 bits (68), Expect = 4e-31
Identities = 99/108 (91%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 114 aagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
|||||||||||||||||||||| |||||||||||||| ||| ||| ||||||||||||||
Sbjct: 66 aagtcacgagtaaagtactatttatgttttatcatctcataacaataaaaatgctaatta 125
Query: 174 t-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaact 220
| ||||||||||||||||||| || ||||||| |||||||| ||||||
Sbjct: 126 taaaaaaatttcaaataagacggatgatcaaaattgggcgcagaaact 173
>RF01058;MIR806;AAAA02032480.1/10824-10585 39946:Oryza sativa Indica
Group
Length = 240
Score = 135 bits (68), Expect = 4e-31
Identities = 107/120 (89%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| |||||||||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 144 cataagtcacgcgtaaagtactattcatgttttatcatctcataacaataaaaatactaa 85
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgca 230
||||||| || ||||||||||||||||||||| ||||| | |||||||| |||| ||||
Sbjct: 84 ttataaacaaaatcaaataagacagacgatcaaggttggacacggaaactcatggttgca 25
Score = 87.7 bits (44), Expect = 8e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgcattta 234
||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||| |||
Sbjct: 161 aaaaaatttcaaataagacggacgatcaaagttgggcacggaaaatcatggctgcactta 220
Query: 235 ttttggaacggaggaagtat 254
|||| ||||||| |||||
Sbjct: 221 aattgggacggagggagtat 240
Score = 46.1 bits (23), Expect = 3e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 23 ctccgtcccaaaataagtgcagccatagttttccgtgtctaattttgaccattcgtctta 82
||||||||||| ||||||||||||| ||||||||| | || ||||| | | |||||||
Sbjct: 233 ctccgtcccaatttaagtgcagccatgattttccgtgcccaactttgatcgtccgtctta 174
Query: 83 ttt 85
|||
Sbjct: 173 ttt 171
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 135 bits (68), Expect = 4e-31
Identities = 126/144 (87%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| | ||||| ||||||||||||||| ||| |||||| |||
Sbjct: 145 cataagtcacgagtaaagtattgttcatattttatcatcttataacaaccaaaatgataa 86
Query: 171 ttataa-aaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgc 229
|||||| ||||||||||||||||| |||||||||||||| ||| | ||| | ||||||||
Sbjct: 85 ttataaaaaaatttcaaataagacggacgatcaaagttgtgcgtgaaaattcatggctgc 26
Query: 230 atttattttggaacggaggaagta 253
| |||||||| ||||||| ||||
Sbjct: 25 acttattttgagacggaggtagta 2
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 23 ctccgtcccaaaataagtgcagccatagttttccgtgtctaattttgaccattcgtctta 82
|||||||||||||||||||||| ||| ||||||| ||| || ||||| |||||||||||
Sbjct: 234 ctccgtcccaaaataagtgcagtcatgattttccgcgtccaactttgatcattcgtctta 175
Query: 83 ttt 85
|||
Sbjct: 174 ttt 172
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 181 tttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgcatttattttgg 240
||||||||||||| | |||||||||||| |||||||| | ||| ||||| |||||||||
Sbjct: 168 tttcaaataagacgaatgatcaaagttggacgcggaaaatcatgactgcacttattttgg 227
Query: 241 aacggaggaagtat 254
||||||| |||||
Sbjct: 228 gacggagggagtat 241
>RF01062;MIR812;AC137620.2/2384-2212 39947:Oryza sativa Japonica
Group
Length = 173
Score = 133 bits (67), Expect = 1e-30
Identities = 99/107 (92%), Gaps = 2/107 (1%)
Strand = Plus / Plus
Query: 115 agtcacgagtaaa-gtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
||||||||||||| ||| | ||||||||||||||| ||||| ||| ||||||||||||||
Sbjct: 67 agtcacgagtaaaagtatttttcatgttttatcattttataacaataaaaatgctaatta 126
Query: 174 taaaaaa-tttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 127 taaaaaatttttaaataagacagacgatcaaagttgggcgcggaaac 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||| ||||||||||||| | ||| |||||||||||||||||
Sbjct: 46 aaaaattttcaaataagacgaatgattaaagttgggcgcggaaa 3
>RF01062;MIR812;AACV01008873.1/15378-15551 39947:Oryza sativa
Japonica Group
Length = 174
Score = 133 bits (67), Expect = 1e-30
Identities = 101/111 (90%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| ||||||| ||||||||||||||| ||| |||| | ||||
Sbjct: 64 cataagtcacgagtaaagtagtattcatattttatcatcttataacaacaaaattactaa 123
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaact 220
|||| ||||||||| ||||||||| ||||||||||||||||||| ||||||
Sbjct: 124 ttataaaaaaattttaaataagacggacgatcaaagttgggcgctgaaact 174
>RF01062;MIR812;AAAA02007969.1/1558-1388 39946:Oryza sativa Indica
Group
Length = 171
Score = 131 bits (66), Expect = 6e-30
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 63 cataagtcacgagtaaagtactattcatgttttatcatcttataacaacaaaaatgctaa 122
Query: 171 ttataaaaaatttcaaataaga 192
||| ||||||||| ||||||||
Sbjct: 123 ttaaaaaaaattttaaataaga 144
>RF01062;MIR812;AC073392.3/147171-147000 4530:Oryza sativa (rice)
Length = 172
Score = 131 bits (66), Expect = 6e-30
Identities = 100/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||| ||||||||||| ||||||||||||||| || ||| |||||||||||
Sbjct: 63 cataagtcacgaggaaagtactatttatgttttatcatcttgtaacaacaaaaatgctaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 123 ttataaaaaaatttcaaataaaacgaacgattaaagttgggcgcggaaac 172
>RF01062;MIR812;AACV01024312.1/7356-7525 39947:Oryza sativa Japonica
Group
Length = 170
Score = 131 bits (66), Expect = 6e-30
Identities = 96/106 (90%)
Strand = Plus / Plus
Query: 113 taagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatt 172
||||||||| ||||||||||||| ||||||| |||||| ||| ||| |||||| ||||||
Sbjct: 64 taagtcacgtgtaaagtactatttatgttttgtcatctcataacaacaaaaatactaatt 123
Query: 173 ataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
|||||||| |||||||||||| |||||||||||||| |||||||||
Sbjct: 124 ataaaaaaattcaaataagacggacgatcaaagttgagcgcggaaa 169
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||| ||||||||||||| ||||||||||||| | ||||||||
Sbjct: 45 aaaaattttcaaataagacggacgatcaaagttagacgcggaaa 2
>RF01062;MIR812;ABRL01002014.1/3171-3001 65489:Oryza barthii
Length = 171
Score = 131 bits (66), Expect = 6e-30
Identities = 100/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
||||||| |||||||||||||||| |||||||||||||| ||| ||| |||||| |||||
Sbjct: 62 ataagtcccgagtaaagtactatttatgttttatcatctcataacaacaaaaatactaat 121
Query: 172 tata-aaaaatttcaaataagacagacgatcaaagttgggcgcggaaact 220
|||| |||||||||||||||||| |||||||||||||| |||| ||||||
Sbjct: 122 tatacaaaaatttcaaataagacggacgatcaaagttgagcgcagaaact 171
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggc 211
||||||||||||||||||| ||| |||||| ||||||
Sbjct: 46 aaaaaatttcaaataagacggacaatcaaaattgggc 10
>RF01062;MIR812;AACV01016492.1/19876-19710 39947:Oryza sativa
Japonica Group
Length = 167
Score = 131 bits (66), Expect = 6e-30
Identities = 100/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||| |||||||||||||||||||||| ||| |||| | ||||
Sbjct: 58 cataagtcacgagtaaagtaccattcatgttttatcatcttataacaacaaaacttctaa 117
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 118 ttataaaaaaatttcaaataaaacgaacgatcaaagttggacgcggaaac 167
>RF01062;MIR812;AP008207.1/14616063-14615893 39947:Oryza sativa
Japonica Group
Length = 171
Score = 131 bits (66), Expect = 6e-30
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| | |
Sbjct: 63 cataagtcacgagtaaagtactattcatgttttatcatctcataacaataaaaatattga 122
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttg 208
||||||||||||| ||||||||| ||||||||||||||
Sbjct: 123 ttataaaaaattttaaataagacggacgatcaaagttg 160
>RF01062;MIR812;AAAA02018660.1/8972-9143 39946:Oryza sativa Indica
Group
Length = 172
Score = 131 bits (66), Expect = 6e-30
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||| ||||
Sbjct: 63 cataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatactaa 122
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaact 220
|||||||||| |||||||||||| ||||||||| ||| ||| |||||||
Sbjct: 123 ttataaaaaaattcaaataagacggacgatcaagtttgtgcggggaaact 172
>RF01062;MIR812;AACV01020594.1/1986-2157 39947:Oryza sativa Japonica
Group
Length = 172
Score = 131 bits (66), Expect = 6e-30
Identities = 91/98 (92%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 62 cataagtcacgagtaaagtactattcatgttttatcatctcataacaacaaaaatgctaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagtt 207
|||| |||||| || ||||||||| |||||||||||||
Sbjct: 122 ttataaaaaaaatttaaataagacggacgatcaaagtt 159
>RF01062;MIR812;AP005675.3/91888-91727 39947:Oryza sativa Japonica
Group
Length = 162
Score = 131 bits (66), Expect = 6e-30
Identities = 91/98 (92%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 53 cataagtcacgagtaaagtactattcatgttttatcatctcataacaataaaaatactaa 112
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagtt 207
|||| ||||||||| ||||||||| |||||||||||||
Sbjct: 113 ttataaaaaaattttaaataagacggacgatcaaagtt 150
>RF01062;MIR812;AP008211.1/3019166-3019336 39947:Oryza sativa
Japonica Group
Length = 171
Score = 131 bits (66), Expect = 6e-30
Identities = 91/98 (92%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 61 cataagtcacgagtaaagtattattcatgttttatcatctcataacaacaaaaatactaa 120
Query: 171 ttataaaaa-atttcaaataagacagacgatcaaagtt 207
||||||||| | ||||||||||||||||||||||||||
Sbjct: 121 ttataaaaataattcaaataagacagacgatcaaagtt 158
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 50 gttttccgtgtctaattttgaccattcgtcttattta 86
|||||||| |||||||||||| || ||||||||||||
Sbjct: 1 gttttccgcgtctaattttgaacaatcgtcttattta 37
>RF01062;MIR812;AC133339.3/154381-154211 39947:Oryza sativa Japonica
Group
Length = 171
Score = 131 bits (66), Expect = 6e-30
Identities = 100/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||| | ||||
Sbjct: 62 cataagtcacgagtaaagtactattcatgttttatcatctcataacaacaaaagtactaa 121
Query: 171 ttataaaaaa-tttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| |||||||||||| |||||||||||||| ||| ||||||
Sbjct: 122 ttataaaaaattttcaaataagatggacgatcaaagttgagcgtggaaac 171
>RF01062;MIR812;AAAA02013629.1/5990-6158 39946:Oryza sativa Indica
Group
Length = 169
Score = 131 bits (66), Expect = 6e-30
Identities = 96/106 (90%)
Strand = Plus / Plus
Query: 114 aagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
||||||||||||||||| ||||||||||||||||||| ||| ||| |||||| |||||||
Sbjct: 64 aagtcacgagtaaagtattattcatgttttatcatctcataacaacaaaaatactaatta 123
Query: 174 taaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||||| |||||||||||||||||| |||||| | |||||||||
Sbjct: 124 taaaaaaaatcaaataagacagacgattaaagttagacgcggaaac 169
>RF01062;MIR812;AP003922.2/73692-73522 39947:Oryza sativa Japonica
Group
Length = 171
Score = 131 bits (66), Expect = 6e-30
Identities = 100/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 62 cataagtcacaagtaaagtactattcatgttttatcatctcataacaacaaaaatgctaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||| ||||||||| || |||||| ||||||| ||||||||||
Sbjct: 122 ttataaaaaaaattcaaataaaacggacgattaaagttgagcgcggaaac 171
>RF01062;MIR812;AP008213.1/4933213-4933383 39947:Oryza sativa
Japonica Group
Length = 171
Score = 131 bits (66), Expect = 6e-30
Identities = 100/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 62 cataagtcacgagtaaagtactattcatgttttattatcttataacaacaaaattgctaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| ||||||||| ||||||||| || ||||||||||| ||||| ||||
Sbjct: 122 ttataaaaaaattttaaataagacggatgatcaaagttgagcgcgaaaac 171
>RF01062;MIR812;AACV01025132.1/10868-10698 39947:Oryza sativa
Japonica Group
Length = 171
Score = 131 bits (66), Expect = 6e-30
Identities = 100/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||| ||||
Sbjct: 62 cataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatactaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| ||||||||||||||||||| |||||||||| ||||| |||||||
Sbjct: 122 ttataaaaaaatttcaaataagacggacgatcaaaattgggtacggaaac 171
>RF01062;MIR812;AY946491.1/27-199 4530:Oryza sativa (rice)
Length = 173
Score = 131 bits (66), Expect = 6e-30
Identities = 100/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||| ||||||||||||||||||| ||| ||| ||| |||||||||||
Sbjct: 64 cataagtcacgagtagagtactattcatgttttattatcccataacaacaaaaatgctaa 123
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| ||||||||||||||||||| |||||||||||||| ||||| ||||
Sbjct: 124 ttataaaaaaatttcaaataagacggacgatcaaagttgagcgcgaaaac 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||| ||||||||||||| ||| |||||||||||||| ||||
Sbjct: 46 aaaaattttcaaataagacgaacggtcaaagttgggcgcagaaa 3
>RF01062;MIR812;AAAA02005193.1/10952-10781 39946:Oryza sativa Indica
Group
Length = 172
Score = 131 bits (66), Expect = 6e-30
Identities = 100/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||| |||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 63 cataagtcacgagcaaagtactattcatgttttatcatctcatagcaataaaaatgctaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| ||||||||| ||||||||| || ||||||||||| | ||||||||
Sbjct: 123 ttataaaaaaattttaaataagacggatgatcaaagttgagagcggaaac 172
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 131 bits (66), Expect = 6e-30
Identities = 114/130 (87%)
Strand = Plus / Plus
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaattt 183
||||||||||||||| |||||| |||| ||| || ||||| ||||| |||||||||||
Sbjct: 110 taaagtactattcatattttataatctaataataattaaaatactaatcataaaaaattt 169
Query: 184 caaataagacagacgatcaaagttgggcgcggaaacttatggctgcatttattttggaac 243
||||||||| ||||||||||||||| | |||||||||||||||||| ||||||||| ||
Sbjct: 170 taaataagacggacgatcaaagttggacacggaaacttatggctgcacttattttgggac 229
Query: 244 ggaggaagta 253
||||| ||||
Sbjct: 230 ggaggtagta 239
Score = 73.8 bits (37), Expect = 1e-12
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 174 taaaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgcattt 233
||||||| || |||||||||||||||| |||||||| | |||||||| || ||||| ||
Sbjct: 81 taaaaaaatttaaataagacagacgattaaagttggacacggaaactcatagctgcgctt 22
Query: 234 attttggaacggaggaagtat 254
||||||| ||||||| |||||
Sbjct: 21 attttgggacggagggagtat 1
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 23 ctccgtcccaaaataagtgcagccatagttttccgtgtctaattttgaccattcgtctta 82
||||||||||||||||||||||||||| |||||||||| || ||||| | | |||||||
Sbjct: 233 ctccgtcccaaaataagtgcagccataagtttccgtgtccaactttgatcgtccgtctta 174
Query: 83 tttaa 87
|||||
Sbjct: 173 tttaa 169
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 131 bits (66), Expect = 6e-30
Identities = 114/130 (87%)
Strand = Plus / Minus
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaattt 183
||||||||||||||| |||||| |||| ||| || ||||| ||||| |||||||||||
Sbjct: 131 taaagtactattcatattttataatctaataataattaaaatactaatcataaaaaattt 72
Query: 184 caaataagacagacgatcaaagttgggcgcggaaacttatggctgcatttattttggaac 243
||||||||| ||||||||||||||| | |||||||||||||||||| ||||||||| ||
Sbjct: 71 taaataagacggacgatcaaagttggacacggaaacttatggctgcacttattttgggac 12
Query: 244 ggaggaagta 253
||||| ||||
Sbjct: 11 ggaggtagta 2
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 23 ctccgtcccaaaataagtgcagccatagttttccgtgtctaattttgaccattcgtctta 82
||||||||||||||||||||||||||| |||||||||| || ||||| | | |||||||
Sbjct: 8 ctccgtcccaaaataagtgcagccataagtttccgtgtccaactttgatcgtccgtctta 67
Query: 83 tttaa 87
|||||
Sbjct: 68 tttaa 72
Score = 73.8 bits (37), Expect = 1e-12
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 174 taaaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgcattt 233
||||||| || |||||||||||||||| |||||||| | |||||||| || ||||| ||
Sbjct: 160 taaaaaaatttaaataagacagacgattaaagttggacacggaaactcatagctgcgctt 219
Query: 234 attttggaacggaggaagtat 254
||||||| ||||||| |||||
Sbjct: 220 attttgggacggagggagtat 240
>RF01062;MIR812;AAAA02035447.1/2861-2704 39946:Oryza sativa Indica
Group
Length = 158
Score = 129 bits (65), Expect = 2e-29
Identities = 96/105 (91%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 114 aagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
|||||||||||||| |||||||||||||||||||||| ||| ||| |||||| |||||||
Sbjct: 54 aagtcacgagtaaattactattcatgttttatcatctcataacaacaaaaatactaatta 113
Query: 174 taaaaaattt-caaataagacagacgatcaaagttgggcgcggaa 217
|||||||||| |||||||||| ||||||||||||| |||| ||||
Sbjct: 114 taaaaaatttacaaataagacggacgatcaaagttaggcgtggaa 158
>RF01062;MIR812;AP008214.1/14414734-14414905 39947:Oryza sativa
Japonica Group
Length = 172
Score = 129 bits (65), Expect = 2e-29
Identities = 98/109 (89%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| ||||||||||||||||||||||||||| || ||| |||||| ||||
Sbjct: 64 cataagtcacgtataaagtactattcatgttttatcatctcatgacaataaaaatactaa 123
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||||||| |||||||||||||||| | |||||||||||| |||||||
Sbjct: 124 ttataaaaattttcaaataagacagatggtcaaagttgggcacggaaac 172
>RF01062;MIR812;AP008207.1/14327956-14328125 39947:Oryza sativa
Japonica Group
Length = 170
Score = 129 bits (65), Expect = 2e-29
Identities = 99/109 (90%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||
Sbjct: 62 ataagtcacgagtaaagtactattcatgttttatcatctcataacaacaaaaatgttaat 121
Query: 172 tat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
| | ||||||||| ||||||||| || |||||||||| |||||||||||
Sbjct: 122 tctaaaaaaattttaaataagacggatgatcaaagttaggcgcggaaac 170
>RF01062;MIR812;AC134230.2/135969-136140 39947:Oryza sativa Japonica
Group
Length = 172
Score = 129 bits (65), Expect = 2e-29
Identities = 93/101 (92%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||| || ||||||||||| ||| ||| |||||||||||
Sbjct: 63 cataagtcacgagtaaagtactatttatattttatcatctcataacaataaaaatgctaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttggg 210
|||| |||||||||||||||| || ||||||||||||||||
Sbjct: 123 ttataaaaaaatttcaaataatacggacgatcaaagttggg 163
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 50 gttttccgtgtctaattttgaccattcgtcttatttaa 87
||||| |||| |||||||||||| ||||||||||||||
Sbjct: 1 gtttttcgtgcctaattttgacctttcgtcttatttaa 38
>RF01062;MIR812;AAAA02024783.1/5623-5452 39946:Oryza sativa Indica
Group
Length = 172
Score = 129 bits (65), Expect = 2e-29
Identities = 98/109 (89%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| ||||||||||||||||||||||||||| || ||| |||||| ||||
Sbjct: 64 cataagtcacgtataaagtactattcatgttttatcatctcatgacaataaaaatactaa 123
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||||||| |||||||||||||||| | |||||||||||| |||||||
Sbjct: 124 ttataaaaattttcaaataagacagatggtcaaagttgggcacggaaac 172
>RF01062;MIR812;AAAA02014312.1/14008-14177 39946:Oryza sativa Indica
Group
Length = 170
Score = 129 bits (65), Expect = 2e-29
Identities = 92/101 (91%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| ||||||||| |||||||||||||||||||||| ||| |||||| ||||
Sbjct: 62 cataagtcacgcgtaaagtacgattcatgttttatcatcttataacaataaaaatactaa 121
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggc 211
|||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 122 ttataaaaaaaatcaaataagacggacgatcaaatttgggc 162
Score = 48.1 bits (24), Expect = 6e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||| ||| ||||||||| ||| ||||||||||||| ||||||
Sbjct: 45 aaaaattttgaaataagactgacaatcaaagttgggcacggaaa 2
>RF01058;MIR806;AACV01007528.1/40785-40545 39947:Oryza sativa
Japonica Group
Length = 241
Score = 129 bits (65), Expect = 2e-29
Identities = 114/129 (88%), Gaps = 1/129 (0%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 145 cataagtcacaagtaaagtactattcatgttttatcatctcatagcaacaaaaatgctaa 86
Query: 171 ttataa-aaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgc 229
|||||| ||||||| |||||| || ||| |||||||||| |||||||| ||||||||
Sbjct: 85 ttataaaaaaattttaaataaaacggacagtcaaagttggacgcggaaaaccatggctgc 26
Query: 230 atttatttt 238
| |||||||
Sbjct: 25 acttatttt 17
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 181 tttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgcatttattttgg 240
||||||||||||| || | | ||||||||||||||||| |||||||||| ||||||| |
Sbjct: 168 tttcaaataagacggatggttaaagttgggcgcggaaaaatatggctgcacttattttag 227
Query: 241 aacggaggaagta 253
||||||| ||||
Sbjct: 228 gacggagggagta 240
Score = 61.9 bits (31), Expect = 4e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 23 ctccgtcccaaaataagtgcagccatagttttccgtgtctaattttgaccattcgtctta 82
|||||||| |||||||||||||||||| ||||||| | | || ||| ||||| |||||||
Sbjct: 234 ctccgtcctaaaataagtgcagccatatttttccgcgcccaactttaaccatccgtctta 175
Query: 83 ttt 85
|||
Sbjct: 174 ttt 172
Score = 50.1 bits (25), Expect = 2e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 23 ctccgtcccaaaataagtgcagccatagttttccgtgtctaattttgac 71
||||||| ||||||||||||||||| |||||||| ||| || ||||||
Sbjct: 8 ctccgtcttaaaataagtgcagccatggttttccgcgtccaactttgac 56
>RF01062;MIR812;AAAA02003190.1/914-1079 39946:Oryza sativa Indica
Group
Length = 166
Score = 127 bits (64), Expect = 9e-29
Identities = 97/108 (89%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
|||| |||||||||||||||||||||| ||||||||| ||||| ||| |||||| |||||
Sbjct: 59 ataaatcacgagtaaagtactattcatattttatcatattataacaacaaaaatactaat 118
Query: 172 tataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||||| ||||||||| || ||| |||||||| |||||||||
Sbjct: 119 tataaaaaattttaaataagacggatgattaaagttggacgcggaaac 166
>RF01062;MIR812;AP005158.3/28303-28131 39947:Oryza sativa Japonica
Group
Length = 173
Score = 127 bits (64), Expect = 9e-29
Identities = 95/104 (91%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||
Sbjct: 64 cataagtcacgagtaaagtactattcatgttttatcatcttataacaacaaaaatactaa 123
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgc 213
|||| |||||| |||||| ||||| |||||| ||| ||||||||
Sbjct: 124 ttataaaaaaaattcaaacaagacggacgattaaaattgggcgc 167
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcg 214
||||| |||| ||||| |||||||||||||||||| ||||
Sbjct: 46 aaaaattttcgaataaaacagacgatcaaagttggacgcg 7
>RF01062;MIR812;AACV01006911.1/363-197 39947:Oryza sativa Japonica
Group
Length = 167
Score = 127 bits (64), Expect = 9e-29
Identities = 86/92 (93%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||
Sbjct: 62 cataagtcacgagtaaagtagtattcatgttttatcatcttataacaacaaaattgctaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatc 201
|||| ||||||||||||||||||| |||||||
Sbjct: 122 ttataaaaaaatttcaaataagacggacgatc 153
>RF01062;MIR812;AAAA02011153.1/42310-42482 39946:Oryza sativa Indica
Group
Length = 173
Score = 125 bits (63), Expect = 3e-28
Identities = 91/99 (91%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||| |||||||||||||||||||||| || |||||||||| ||||
Sbjct: 63 cataagtcacgagtaaaatactattcatgttttatcatctcgtaacaagaaaaatactaa 122
Query: 171 ttataaaaa-atttcaaataagacagacgatcaaagttg 208
||||||||| ||||||||||||| ||||||||||||||
Sbjct: 123 ttataaaaatttttcaaataagacggacgatcaaagttg 161
>RF01062;MIR812;AACV01007418.1/3561-3398 39947:Oryza sativa Japonica
Group
Length = 164
Score = 125 bits (63), Expect = 3e-28
Identities = 90/99 (90%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||
Sbjct: 56 cataagtcacgagtaaagtactattcatgttttatcatctcataacaataaaaatattaa 115
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgg 209
|||||||||||||||||||| || ||||| ||||||||
Sbjct: 116 ttataaaaaatttcaaataaaacgaacgattaaagttgg 154
>RF01062;MIR812;AAAA02004256.1/11499-11667 39946:Oryza sativa Indica
Group
Length = 169
Score = 125 bits (63), Expect = 3e-28
Identities = 94/103 (91%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 118 cacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaattat-aa 176
||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||| || ||
Sbjct: 67 cacgagtaaagtactattcatgttttatcatctcataacaataaaaatactaatcataaa 126
Query: 177 aaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 127 aaaaatttaaataagacagacgatcaaagttgggcgcagaaac 169
>RF01062;MIR812;AACV01010650.1/39037-39206 39947:Oryza sativa
Japonica Group
Length = 170
Score = 125 bits (63), Expect = 3e-28
Identities = 96/107 (89%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
|||||||| |||||||||||||||||| ||||||||||| ||| ||| |||||| |||||
Sbjct: 63 ataagtcatgagtaaagtactattcatattttatcatctcataacaacaaaaatactaat 122
Query: 172 tataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||||||| | ||||||||| |||||||||||||| |||||||||
Sbjct: 123 tataaaaaaaattaaataagacggacgatcaaagttgagcgcggaaa 169
>RF01062;MIR812;AACV01007781.1/24830-25001 39947:Oryza sativa
Japonica Group
Length = 172
Score = 125 bits (63), Expect = 3e-28
Identities = 100/111 (90%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| ||||||||||||||||||||||| ||| ||| || |||
Sbjct: 62 cataagtcacgagtaaagtagtattcatgttttatcatcttataacaactaaattgttaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaact 220
|||| |||||| |||||||||||| ||||||||||||| ||||| ||||||
Sbjct: 122 ttataaaaaaaattcaaataagacggacgatcaaagttaggcgctgaaact 172
>RF01062;MIR812;AAAA02027930.1/20244-20415 39946:Oryza sativa Indica
Group
Length = 172
Score = 125 bits (63), Expect = 3e-28
Identities = 88/95 (92%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 63 cataagtcacgagtaaagtactattcatgttttatcatctcataacaacaaaaatactaa 122
Query: 171 ttataaaaaa-tttcaaataagacagacgatcaaa 204
|||||||||| ||| ||||||||| ||||||||||
Sbjct: 123 ttataaaaaatttttaaataagacggacgatcaaa 157
>RF01058;MIR806;CR855233.1/33445-33205 4530:Oryza sativa (rice)
Length = 241
Score = 125 bits (63), Expect = 3e-28
Identities = 100/111 (90%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 145 cataagtcacgagtaaaatactattcatgttttatcatctcataacaacaaaaatactaa 86
Query: 171 ttataaaaa-atttcaaataagacagacgatcaaagttgggcgcggaaact 220
||||||||| ||||||||||||| |||||||||| |||| | ||||||||
Sbjct: 85 ttataaaaagttttcaaataagacggacgatcaaaattggacacggaaact 35
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 182 ttcaaataagacagacgatcaaagttgggcgcg 214
|||||||||||| ||||||||||||||||||||
Sbjct: 169 ttcaaataagacggacgatcaaagttgggcgcg 201
>RF01062;MIR812;AP008209.1/13645053-13644882 39947:Oryza sativa
Japonica Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 99/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||| |||| ||||||||||||| ||||||||||||||| ||| ||| |||||| ||||
Sbjct: 63 cataaatcacaagtaaagtactatacatgttttatcatctcataacaataaaaatactaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| ||||||||||||||||||| |||||||||||||| ||||| ||||
Sbjct: 123 ttataaaaaaatttcaaataagacggacgatcaaagttgagcgcgaaaac 172
>RF01062;MIR812;AACV01008221.1/3287-3126 39947:Oryza sativa Japonica
Group
Length = 162
Score = 123 bits (62), Expect = 1e-27
Identities = 87/94 (92%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
||||||||||||||||||||||||||| ||||||||||||||| || |||||| |||||
Sbjct: 54 ataagtcacgagtaaagtactattcatattttatcatcttataataacaaaaatactaat 113
Query: 172 tat-aaaaaatttcaaataagacagacgatcaaa 204
||| |||||||||||||||||| |||||||||||
Sbjct: 114 tataaaaaaatttcaaataagatagacgatcaaa 147
>RF01062;MIR812;AP003705.3/61480-61311 39947:Oryza sativa Japonica
Group
Length = 170
Score = 123 bits (62), Expect = 1e-27
Identities = 90/98 (91%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||| |||||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 61 cataagtcatgagtaaagtattattcatgttttatcatcttataaaaacaaaaatgctaa 120
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagtt 207
|||| ||||||||||||||||||| || ||||||||||
Sbjct: 121 ttataaaaaaatttcaaataagacggatgatcaaagtt 158
>RF01062;MIR812;AACV01011121.1/31665-31494 39947:Oryza sativa
Japonica Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 99/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||| |||||||||||||||||||||||||||||||| ||| ||| | |||| ||||
Sbjct: 63 cataagttacgagtaaagtactattcatgttttatcatctcataacaatataaatactaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| ||||||||| ||||||||| |||||||||||| |||||||||||
Sbjct: 123 ttataaaaaaattttaaataagacgaacgatcaaagttaggcgcggaaac 172
>RF01062;MIR812;AY946442.1/200-29 4530:Oryza sativa (rice)
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 99/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| |||
Sbjct: 63 cataagtcacgagtaaagtactattcatgttttatcatctcataacaacaaaaatgttaa 122
Query: 171 ttataaa-aaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||||| ||| ||||||||| ||||||| |||||||||||||||||
Sbjct: 123 ttataaattttttttaaataagacggacgatcgaagttgggcgcggaaac 172
Score = 48.1 bits (24), Expect = 6e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
|||||| |||||||||||| ||| ||||||||||||| |||||
Sbjct: 46 aaaaaaattcaaataagacgaacggtcaaagttgggcgtggaaa 3
>RF01062;MIR812;AACV01023121.1/33022-33182 39947:Oryza sativa
Japonica Group
Length = 161
Score = 123 bits (62), Expect = 1e-27
Identities = 99/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||| |||||||||||||||||||| || ||| |||||| ||||
Sbjct: 52 cataagtcacgagtaaagcactattcatgttttatcatcacgtaacaacaaaaatactaa 111
Query: 171 ttataaaaaa-tttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| ||||||||||||| |||||||||| ||||||||| ||||
Sbjct: 112 ttataaaaaattttcaaataagacggacgatcaaaattgggcgcgaaaac 161
>RF01062;MIR812;AAAA02002407.1/1680-1849 39946:Oryza sativa Indica
Group
Length = 170
Score = 123 bits (62), Expect = 1e-27
Identities = 99/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||| |||||||||||| |||| |||||||||||||||||| ||| ||||||| |||
Sbjct: 61 cataagtaacgagtaaagtattatttatgttttatcatcttataacaacaaaaatgttaa 120
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||||||||||||| || ||||||||||||||| |||| ||||
Sbjct: 121 ttataaaaaaatttcaaataaaacggacgatcaaagttggacgcgaaaac 170
>RF01062;MIR812;AACV01025578.1/4137-4307 39947:Oryza sativa Japonica
Group
Length = 171
Score = 123 bits (62), Expect = 1e-27
Identities = 99/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||| |||| ||||||||||||||| ||||||||||| ||| ||| ||||||||||
Sbjct: 62 cataagttacgactaaagtactattcatattttatcatctcataacaataaaaatgctag 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||| |||||||||||| ||||||||||||| |||||||||||
Sbjct: 122 ttataaaaaaaattcaaataagacggacgatcaaagttaggcgcggaaac 171
>RF01062;MIR812;AP008210.1/28165092-28164921 39947:Oryza sativa
Japonica Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 99/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| ||| ||||||||||||||||||| ||| |||||||||||
Sbjct: 63 cataagtcacgagtaaagtaatatccatgttttatcatcttataacaacaaaaatgctaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||| || |||||| || ||||||||||||||| |||| ||||
Sbjct: 123 ttataaaaaaaatttaaataaaacggacgatcaaagttggacgcgaaaac 172
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 63 aattttgaccattcgtcttatttaa 87
|||||||||||||||||||||||||
Sbjct: 14 aattttgaccattcgtcttatttaa 38
>RF01062;MIR812;AAAA02011645.1/12642-12812 39946:Oryza sativa Indica
Group
Length = 171
Score = 123 bits (62), Expect = 1e-27
Identities = 99/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||
Sbjct: 62 cataagtcacgagtaaagtactatttatgttttatcatctcatagcaataaaaatgctaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||| || ||||||||| ||| | |||||||||||| ||||||
Sbjct: 122 ttataaaaaaaatttaaataagacggacaaccaaagttgggcgtggaaac 171
>RF01062;MIR812;AACV01012761.1/14916-15085 39947:Oryza sativa
Japonica Group
Length = 170
Score = 123 bits (62), Expect = 1e-27
Identities = 99/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| ||||||||||||||||||| ||| ||| ||||| ||||
Sbjct: 61 cataagtcacgagtaaagtagtattcatgttttatcatctcataacaacgaaaatactaa 120
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| ||||||||||||||||||| |||||||||||||| ||| |||||
Sbjct: 121 ttataaaaaaatttcaaataagacgaacgatcaaagttggacgcagaaac 170
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||||||||||||||||| || |||||||||| | ||||||||
Sbjct: 45 aaaaaatttcaaataagacggatgatcaaagttagacgcggaaa 2
>RF01062;MIR812;AL844878.4/87591-87762 4530:Oryza sativa (rice)
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 99/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||| ||||||||| |||||||| ||||||||||||||| ||| ||||||| |||
Sbjct: 63 cataagtcatgagtaaagtcctattcatattttatcatcttataacaataaaaatggtaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 123 ttataaaaaaaatttaaataagacagacgatcaaagttaagcgcggaaac 172
>RF01058;MIR806;AACV01003457.1/7153-7393 39947:Oryza sativa Japonica
Group
Length = 241
Score = 123 bits (62), Expect = 1e-27
Identities = 102/114 (89%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||| ||| ||||||||||||||||||||||||||| ||| |||||||||| ||||
Sbjct: 145 cataagttacgcataaagtactattcatgttttatcatctcataacaagaaaaatactaa 86
Query: 171 ttataa-aaaatttcaaataagacagacgatcaaagttgggcgcggaaacttat 223
|||||| |||| |||||||||||| || |||||||||||||| || ||||||||
Sbjct: 85 ttataaaaaaagttcaaataagacggatgatcaaagttgggcacgaaaacttat 32
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 183 tcaaataagacagacgatcaaagttgggcgcggaaacttatggct 227
||||||||||| |||||| |||||||||| |||||| | ||||||
Sbjct: 170 tcaaataagacggacgattaaagttgggcacggaaaatcatggct 214
>RF01062;MIR812;AL928751.2/51474-51645 4530:Oryza sativa (rice)
Length = 172
Score = 121 bits (61), Expect = 5e-27
Identities = 89/97 (91%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 115 agtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaattat 174
|||||||| ||||||| ||||||||||||||||||| ||| ||| |||||||||||||||
Sbjct: 67 agtcacgaataaagtaatattcatgttttatcatctcataacaacaaaaatgctaattat 126
Query: 175 -aaaaaatttcaaataagacagacgatcaaagttggg 210
||||||||||||||| ||| ||||||||||||||||
Sbjct: 127 aaaaaaatttcaaatatgacggacgatcaaagttggg 163
>RF01062;MIR812;AACV01007528.1/40580-40750 39947:Oryza sativa
Japonica Group
Length = 171
Score = 121 bits (61), Expect = 5e-27
Identities = 98/109 (89%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 62 cataagtcacaagtaaagtactattcatgttttatcatctcatagcaacaaaaatgctaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
|||| ||||||||| |||||| || ||| |||||||||| ||||||||
Sbjct: 122 ttataaaaaaattttaaataaaacggacagtcaaagttggacgcggaaa 170
>RF01062;MIR812;AC121365.2/126856-127026 39947:Oryza sativa Japonica
Group
Length = 171
Score = 121 bits (61), Expect = 5e-27
Identities = 98/109 (89%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
||||| ||||||||||||||||||||||||||||||| | ||| ||| |||||| |||||
Sbjct: 63 ataagccacgagtaaagtactattcatgttttatcatatcataacaacaaaaatactaat 122
Query: 172 tat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|| ||||||||||||||||||| |||||| ||||||||| ||||||||
Sbjct: 123 cataaaaaaatttcaaataagacggacgattaaagttgggtgcggaaac 171
>RF01062;MIR812;AAAA02019804.1/47754-47923 39946:Oryza sativa Indica
Group
Length = 170
Score = 121 bits (61), Expect = 5e-27
Identities = 95/105 (90%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
|||||||||||||||| |||||||||| ||||||||||| ||| ||| |||||| |||||
Sbjct: 62 ataagtcacgagtaaaatactattcatattttatcatctcataacaacaaaaatactaat 121
Query: 172 tat-aaaaaatttcaaataagacagacgatcaaagttgggcgcgg 215
||| ||||||||| ||||||||| |||||| ||||||||||||||
Sbjct: 122 tataaaaaaatttaaaataagacggacgattaaagttgggcgcgg 166
>RF01062;MIR812;AC137507.3/45931-46099 39947:Oryza sativa Japonica
Group
Length = 169
Score = 121 bits (61), Expect = 5e-27
Identities = 97/109 (88%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||| ||||||| || |||| |||||||||||||||||| ||| ||||||| |||
Sbjct: 61 cataagtcatgagtaaaatattatttatgttttatcatcttataacaacaaaaatgttaa 120
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| |||||||||||| || ||| |||||||| |||||||||
Sbjct: 121 ttataaaaaaattcaaataagacggatgattaaagttggacgcggaaac 169
>RF01062;MIR812;AAAA02007970.1/6373-6202 39946:Oryza sativa Indica
Group
Length = 172
Score = 121 bits (61), Expect = 5e-27
Identities = 98/109 (89%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||| |||||||||||||| |||| || |||||||||||
Sbjct: 63 cataagtcacgagtaaagtactatttatgttttatcatctaatattaataaaaatgctaa 122
Query: 171 ttataaaaaa-tttcaaataagacagacgatcaaagttgggcgcggaaa 218
|||||||||| ||| |||||||| | |||||||||||| ||||||||
Sbjct: 123 ttataaaaaatttttgaataagacgaatgatcaaagttggacgcggaaa 171
>RF01062;MIR812;AAAA02017353.1/54593-54420 39946:Oryza sativa Indica
Group
Length = 174
Score = 119 bits (60), Expect = 2e-26
Identities = 100/111 (90%), Gaps = 3/111 (2%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaa--tgcta 169
||||||||||||||||||| ||||| ||||| ||||||||||| ||| ||||| | |||
Sbjct: 64 ataagtcacgagtaaagtattattcgtgtttcatcatcttatagcaacaaaaaaatacta 123
Query: 170 attataaaa-aatttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||||||| ||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 124 attataaaaaaatttcaaataagacggacgatcaaagttgggcgcagaaac 174
>RF01062;MIR812;AACV01024672.1/16013-16181 39947:Oryza sativa
Japonica Group
Length = 169
Score = 119 bits (60), Expect = 2e-26
Identities = 87/96 (90%)
Strand = Plus / Plus
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaattt 183
||||||||||||||| ||||||||||| ||| ||| |||||| |||||||||||||||||
Sbjct: 74 taaagtactattcatattttatcatctcataacaataaaaatactaattataaaaaattt 133
Query: 184 caaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| || ||| |||||||||| |||||||
Sbjct: 134 caaataagacggatgattaaagttgggcacggaaac 169
>RF01062;MIR812;AP008215.1/16622921-16622752 39947:Oryza sativa
Japonica Group
Length = 170
Score = 119 bits (60), Expect = 2e-26
Identities = 91/100 (91%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 61 cataagtcacgagtaaagtattattcatgttttatcatctcatagcaacaaaaatactaa 120
Query: 171 ttataaaaaa-tttcaaataagacagacgatcaaagttgg 209
|||||||||| ||||||||||||| || |||| |||||||
Sbjct: 121 ttataaaaaattttcaaataagacggatgatctaagttgg 160
>RF01062;MIR812;AAAA02008855.1/40375-40547 39946:Oryza sativa Indica
Group
Length = 173
Score = 117 bits (59), Expect = 8e-26
Identities = 90/99 (90%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||| |||||| ||||||||||| ||||||||||||||| ||| ||| |||||| ||||
Sbjct: 64 cataaatcacgaataaagtactatacatgttttatcatctcataacaataaaaatactaa 123
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttg 208
|||| ||||||||||||||||||| ||||||||||||||
Sbjct: 124 ttataaaaaaatttcaaataagacggacgatcaaagttg 162
>RF01062;MIR812;AAAA02017582.1/50910-50736 39946:Oryza sativa Indica
Group
Length = 175
Score = 117 bits (59), Expect = 8e-26
Identities = 101/113 (89%), Gaps = 4/113 (3%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgtttt---atcatcttatatcaagaaaaatgc 167
||||||||||||||||| ||||||||||||||| ||||||| ||| ||| |||||| |
Sbjct: 63 cataagtcacgagtaaaatactattcatgttttatgatcatctcataacaataaaaatac 122
Query: 168 taattataaaaaa-tttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||||||||||| ||||||||||||| ||||||||||||| |||| ||||||
Sbjct: 123 taattataaaaaattttcaaataagacggacgatcaaagtttggcgtggaaac 175
>RF01062;MIR812;AP003488.3/64471-64314 39947:Oryza sativa Japonica
Group
Length = 158
Score = 117 bits (59), Expect = 8e-26
Identities = 89/99 (89%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||| ||||||||| || ||||||||||||||||||| ||| ||| ||||| ||||
Sbjct: 50 cataagttacgagtaaaatagtattcatgttttatcatctcataacaaacaaaatactaa 109
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgg 209
|||||||||| |||||||||||| |||||||||||||||
Sbjct: 110 ttataaaaaaattcaaataagacggacgatcaaagttgg 148
>RF01062;MIR812;AACV01015595.1/7698-7548 39947:Oryza sativa Japonica
Group
Length = 151
Score = 117 bits (59), Expect = 8e-26
Identities = 95/107 (88%)
Strand = Plus / Plus
Query: 113 taagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatt 172
||||||||||||| || |||||| |||||||||||||||||| ||| ||| || |||||
Sbjct: 45 taagtcacgagtatagcactatttatgttttatcatcttataacaacaaagatattaatt 104
Query: 173 ataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||| ||||||||| || ||||||||||||||| |||||||||
Sbjct: 105 ataaaaaaattcaaataaaacggacgatcaaagttggacgcggaaac 151
>RF01062;MIR812;AAAA02018686.1/12077-11907 39946:Oryza sativa Indica
Group
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 98/110 (89%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||| || ||||||||||| ||| ||| |||||| |||
Sbjct: 62 cataagtcacgagtaaagtactatttatattttatcatctcataacaataaaaatattaa 121
Query: 171 ttataaaaaa-tttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| ||||||||||||| |||||||||||| | |||||||||
Sbjct: 122 ttataaaaaactttcaaataagacgaacgatcaaagttagacgcggaaac 171
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 185 aaataagacagacgatcaaagttgggcgcggaaa 218
||||||||| |||| |||||||||||||||||||
Sbjct: 35 aaataagacggacggtcaaagttgggcgcggaaa 2
>RF01062;MIR812;AP008208.1/22478382-22478209 39947:Oryza sativa
Japonica Group
Length = 174
Score = 115 bits (58), Expect = 3e-25
Identities = 98/110 (89%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||| ||||||| || |||||| |||| ||| ||| |||||||||||
Sbjct: 65 cataagtcacgagtaaaatactatttatattttattatctcataacaacaaaaatgctaa 124
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| ||||||||| ||||||||| |||||||||||||| ||| ||||||
Sbjct: 125 ttataaaaaaattttaaataagacggacgatcaaagttgagcgtggaaac 174
>RF01062;MIR812;AAAA02014084.1/6055-5884 39946:Oryza sativa Indica
Group
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 98/110 (89%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||| |||
Sbjct: 63 cataagtcacgagtaaagtactattcatgttttattatctcataacaacaaaaatattaa 122
Query: 171 ttata-aaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||| |||| ||| ||||||||| ||||||||||| ||||||||||||
Sbjct: 123 ttatacaaaatttttaaataagacgaacgatcaaagtggggcgcggaaac 172
>RF01062;MIR812;AACV01025420.1/209-362 39947:Oryza sativa Japonica
Group
Length = 154
Score = 115 bits (58), Expect = 3e-25
Identities = 89/98 (90%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||| ||| ||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 45 cataagtcacgagtaaaaaactgttcatgttttatcatctcataacaataaaaatactaa 104
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagtt 207
|||| ||||||||| |||||||||||||||||||||||
Sbjct: 105 ttataaaaaaattttaaataagacagacgatcaaagtt 142
>RF01062;MIR812;AP005284.3/81040-80870 39947:Oryza sativa Japonica
Group
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 98/110 (89%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||| |||| ||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 62 cataagtcacgagtaaattactgttcatgttttatcatctcataacaacaaaaatactaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||||||||||||| || |||||||||| || | |||||||||
Sbjct: 122 ttataaaaaaatttcaaataaaacggacgatcaaaattagacgcggaaac 171
>RF01062;MIR812;AP004689.3/27890-27719 39947:Oryza sativa Japonica
Group
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| ||||||||||||||||||||||||||| ||| || |||||| ||||
Sbjct: 64 cataagtcacgcataaagtactattcatgttttatcatctcataataataaaaatactaa 123
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttg 208
|||||||||||||||||||||| ||| ||||||||||
Sbjct: 124 ttataaaaaatttcaaataagatggacaatcaaagttg 161
>RF01062;MIR812;AP006186.3/121305-121135 39947:Oryza sativa Japonica
Group
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 98/110 (89%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||| ||||| |||| ||||||||||| ||| || |||||| ||||
Sbjct: 62 cataagtcacgagtaaaatactaatcatattttatcatctcataataacaaaaatactaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||||||||||||||| ||||||| ||||||||||||| ||||
Sbjct: 122 ttataaaaaaatttcaaataagatagacgattaaagttgggcgcgaaaac 171
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||||||||||||||||| |||| | |||||||||||||||||
Sbjct: 46 aaaaaatttcaaataagacggacggttaaagttgggcgcggaaa 3
>RF01062;MIR812;AAAA02004709.1/10898-10729 39946:Oryza sativa Indica
Group
Length = 170
Score = 115 bits (58), Expect = 3e-25
Identities = 85/94 (90%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||| ||||||||||| ||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 62 cataagtcgcgagtaaagtattattcatgttttatcatctcataacaacaaaaatactaa 121
Query: 171 ttataaaaaatttcaaataagacagacgatcaaa 204
|||||||||| ||||||||||| ||||||||||
Sbjct: 122 ttataaaaaaattcaaataagatggacgatcaaa 155
>RF01062;MIR812;AAAA02020504.1/6865-7035 39946:Oryza sativa Indica
Group
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 98/110 (89%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| |||||| || ||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 62 cataagtcacaagtaaaatattattcatgttttatcatctcataacaacaaaaatactaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| ||||||||||||||||| | ||||||||||||||| | |||||||
Sbjct: 122 ttataaaaaaatttcaaataaggcggacgatcaaagttggacacggaaac 171
Score = 52.0 bits (26), Expect = 4e-06
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 181 tttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||||||||||| ||||||||||||| ||||||||||
Sbjct: 39 tttcaaataagacggacgatcaaagtt-ggcgcggaaa 3
>RF01062;MIR812;AAAA02015039.1/40485-40656 39946:Oryza sativa Indica
Group
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 92/102 (90%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 63 cataagtcacgagtaaagcactattcatgttttatcatctcataacaacaaaaatactaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggc 211
|||| |||||||||||||||| || ||||| ||||||||||
Sbjct: 123 ttataaaaaaatttcaaataaaacgaacgattaaagttgggc 164
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||||||||||||||||| ||| |||||||||| ||||||||
Sbjct: 45 aaaaaatttcaaataagacgaacggtcaaagttggacgcggaaa 2
>RF01062;MIR812;AP008211.1/24592306-24592476 39947:Oryza sativa
Japonica Group
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 92/102 (90%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||| || ||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 62 cataagtcacgagtaaattattattcatgttttatcatctcataacaataaaaatactaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggc 211
|||| ||||||||| |||||||| | ||||||||||||||||
Sbjct: 122 ttataaaaaaattttaaataagaaaaacgatcaaagttgggc 163
>RF01062;MIR812;AAAA02008846.1/795-964 39946:Oryza sativa Indica
Group
Length = 170
Score = 115 bits (58), Expect = 3e-25
Identities = 92/102 (90%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| |||| |||||||||| ||||||||||| ||| ||| |||||| ||||
Sbjct: 61 cataagtcacgtataaaatactattcatattttatcatctaataacaacaaaaatactaa 120
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggc 211
|||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 121 ttataaaaaaatttcaaacaagacagacgatcaaagttgggc 162
>RF01062;MIR812;AAAA02027221.1/2770-2605 39946:Oryza sativa Indica
Group
Length = 166
Score = 115 bits (58), Expect = 3e-25
Identities = 89/98 (90%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 57 cataagtcacgagtaaagtactattcatgttttatcatctcataacaataaaaatactaa 116
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagtt 207
|||| |||||| || |||||| || |||||||||||||
Sbjct: 117 ttataaaaaaaatttaaataaaacggacgatcaaagtt 154
>RF01062;MIR812;AY946402.1/28-200 4530:Oryza sativa (rice)
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 97/110 (88%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||| ||| |||||||||| ||||||||||||||||||||||| | | |||| ||||||
Sbjct: 64 cataattcatgagtaaagtagtattcatgttttatcatcttataactacaaaattgctaa 123
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaact 220
|||||||||| ||||||||||| || |||||||||| ||||| ||||||
Sbjct: 124 ttataaaaaaaatcaaataagacggatgatcaaagttaggcgctgaaact 173
>RF01062;MIR812;AACV01003457.1/7358-7188 39947:Oryza sativa Japonica
Group
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 92/102 (90%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||| ||| ||||||||||||||||||||||||||| ||| |||||||||| ||||
Sbjct: 62 cataagttacgcataaagtactattcatgttttatcatctcataacaagaaaaatactaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggc 211
|||| |||||| |||||||||||| || ||||||||||||||
Sbjct: 122 ttataaaaaaagttcaaataagacggatgatcaaagttgggc 163
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 183 tcaaataagacagacgatcaaagttgggcgcggaaa 218
||||||||||| |||||| |||||||||| ||||||
Sbjct: 37 tcaaataagacggacgattaaagttgggcacggaaa 2
>RF01062;MIR812;CR855240.1/66188-66017 4530:Oryza sativa (rice)
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 98/110 (89%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| |||||||| |||||||| |||||||||| || ||| |||||||||||
Sbjct: 63 cataagtcacaagtaaagtcttattcatgctttatcatctcatgacaataaaaatgctaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| ||||||||||||||||||| |||||||||| |||| |||||||||
Sbjct: 123 ttataaaaaaatttcaaataagacggacgatcaaatttggacgcggaaac 172
>RF01062;MIR812;AACV01002667.1/14693-14523 39947:Oryza sativa
Japonica Group
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 98/110 (89%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||| | |||||||||||||||||||||||||||||| ||| ||| ||||| ||||
Sbjct: 62 cataagttatgagtaaagtactattcatgttttatcatctcataacaacgaaaatactaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| ||||||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 122 ttataaaaaaattttaaataagatggacgatcaaagttgggcacggaaac 171
>RF01062;MIR812;AC068950.11/124784-124613 39947:Oryza sativa
Japonica Group
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 98/110 (89%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||| |||||| ||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 63 cataagtcataagtaaaatactattcatgttttatcatcttatatcagcaaaaatactaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| ||||||||| ||||||||| ||| |||||||||| |||||||||
Sbjct: 123 ttataaaaaaattttaaataagacgaacggtcaaagttggacgcggaaac 172
>RF01062;MIR812;AP002908.2/109269-109442 39947:Oryza sativa Japonica
Group
Length = 174
Score = 113 bits (57), Expect = 1e-24
Identities = 94/105 (89%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||| |||||||||||||||||||||||||||||| | | ||| ||| || ||||
Sbjct: 65 cataagtcaagagtaaagtactattcatgttttatcatctgacaacaacaaagatactaa 124
Query: 171 ttataaaaaa-tttcaaataagacagacgatcaaagttgggcgcg 214
|||||||||| |||||||||||||| ||| |||||||| ||||||
Sbjct: 125 ttataaaaaattttcaaataagacatacggtcaaagttaggcgcg 169
>RF01062;MIR812;AAAA02043709.1/2181-2021 39946:Oryza sativa Indica
Group
Length = 161
Score = 113 bits (57), Expect = 1e-24
Identities = 95/105 (90%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaa-gaaaaatgcta 169
|||||||||||||||||| |||||||||||||||||||| ||| ||| |||||| |||
Sbjct: 51 cataagtcacgagtaaagcactattcatgttttatcatcacataacaacaaaaaatacta 110
Query: 170 attat-aaaaaatttcaaataagacagacgatcaaagttgggcgc 213
||||| ||||||||||||||||||| |||||||||| ||||||||
Sbjct: 111 attataaaaaaatttcaaataagacggacgatcaaaattgggcgc 155
>RF01062;MIR812;AP008208.1/12857069-12856898 39947:Oryza sativa
Japonica Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 91/101 (90%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| ||||||||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 63 cataagtcacgtataaagtactattcatgttttatcatctcataacaataaaaatactaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttggg 210
|||| ||||||||||||||||||| || ||||||| |||||
Sbjct: 123 ttataaaaaaatttcaaataagacggatgatcaaatttggg 163
>RF01062;MIR812;AC133008.3/46362-46533 39947:Oryza sativa Japonica
Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 96/109 (88%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| ||||||||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 64 cataagtcacatataaagtactattcatgttttatcatctcatagcaataaaaatactaa 123
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| | ||||||||| |||||||||||||||| |||||||
Sbjct: 124 ttataaaaaaaattaaataagacgaacgatcaaagttgggcacggaaac 172
>RF01062;MIR812;AAAA02022486.1/26495-26325 39946:Oryza sativa Indica
Group
Length = 171
Score = 113 bits (57), Expect = 1e-24
Identities = 94/105 (89%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 116 gtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaattat- 174
|||||||||||||||||||||||||||||||||| |||| ||| |||| ||||||||||
Sbjct: 67 gtcacgagtaaagtactattcatgttttatcatcgtataacaacaaaattgctaattata 126
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||||||||| || |||||| ||||||| ||||||||
Sbjct: 127 aaaaaatttcaaataaaacggacgattgaagttggatgcggaaac 171
>RF01062;MIR812;AP004161.3/106159-105991 39947:Oryza sativa Japonica
Group
Length = 169
Score = 113 bits (57), Expect = 1e-24
Identities = 96/109 (88%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| ||||||| ||||||||||| ||| ||| ||| || ||||
Sbjct: 61 cataagtcacgagtaaagtattattcatattttatcatctcataacaacaaatatactaa 120
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| || ||||||||| | | |||||||||||| ||||||||
Sbjct: 121 ttataaaaaaatttaaataagacgggcaatcaaagttgggtgcggaaac 169
>RF01062;MIR812;AAAA02007218.1/82249-82418 39946:Oryza sativa Indica
Group
Length = 170
Score = 113 bits (57), Expect = 1e-24
Identities = 96/109 (88%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||| ||||||| ||||||||||||||||||| ||| ||| |||||| |||
Sbjct: 62 cataagtcacgaataaagtattattcatgttttatcatctcataacaacaaaaatattaa 121
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| ||||||||| || ||| ||||||||||| | |||||||
Sbjct: 122 ttataaaaaaattcaaataaaacggactatcaaagttggacacggaaac 170
>RF01062;MIR812;CR855167.1/66190-66024 4530:Oryza sativa (rice)
Length = 167
Score = 113 bits (57), Expect = 1e-24
Identities = 96/109 (88%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| |||||||||||||||||||||| |||||||| ||| |||||| ||||
Sbjct: 59 cataagtcacacataaagtactattcatgttttataatcttataacaataaaaatactaa 118
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| || ||||||||| |||||||||| |||| | |||||||
Sbjct: 119 ttataaaaaaattaaaataagacggacgatcaaaattggacacggaaac 167
>RF01062;MIR812;ABRL01002073.1/6466-6304 65489:Oryza barthii
Length = 163
Score = 111 bits (56), Expect = 5e-24
Identities = 96/108 (88%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 113 taagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatt 172
|||||||||||||||||||||||||| ||||||||||||||| ||| |||||| |||||
Sbjct: 56 taagtcacgagtaaagtactattcatattttatcatcttataacaataaaaatattaatt 115
Query: 173 ataaaa-aatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||| ||||| ||||||||| ||||| ||||||| | ||||||||
Sbjct: 116 ataaaataattttaaataagacgaacgattaaagttgagtgcggaaac 163
>RF01062;MIR812;AAAA02017831.1/48225-48390 39946:Oryza sativa Indica
Group
Length = 166
Score = 111 bits (56), Expect = 5e-24
Identities = 89/99 (89%), Gaps = 2/99 (2%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| ||||| || ||||||||||||||||||| ||| ||| | |||| ||||
Sbjct: 60 cataagtcacaagtaa--tattattcatgttttatcatctcataacaacacaaatactaa 117
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgg 209
||||||||||||||||||||||| |||||||||||||||
Sbjct: 118 ttataaaaaatttcaaataagacggacgatcaaagttgg 156
>RF01062;MIR812;AC119073.1/10812-10640 39947:Oryza sativa Japonica
Group
Length = 173
Score = 111 bits (56), Expect = 5e-24
Identities = 93/104 (89%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||| ||||||||||||||| || ||||||||||| ||| ||| |||||| ||||
Sbjct: 63 cataagtcatgagtaaagtactatttatattttatcatctcataacaacaaaaatactaa 122
Query: 171 ttataaaaaatt-tcaaataagacagacgatcaaagttgggcgc 213
||||||||| || |||||||| || |||||||||||||||||||
Sbjct: 123 ttataaaaatttctcaaataaaacggacgatcaaagttgggcgc 166
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 46 aaaaattttcaaataagacagacgattaaagttgggcgcggaaa 3
>RF01062;MIR812;AACV01022766.1/13309-13482 39947:Oryza sativa
Japonica Group
Length = 174
Score = 111 bits (56), Expect = 5e-24
Identities = 87/96 (90%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 125 aaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaa-aattt 183
|||||| ||||||| ||||||||||| ||| ||| |||||| |||||||||||| |||||
Sbjct: 79 aaagtattattcatattttatcatctcataacaacaaaaatactaattataaaaaaattt 138
Query: 184 caaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| ||||||||||||||||| |||||||
Sbjct: 139 caaataagacggacgatcaaagttgggcacggaaac 174
>RF01062;MIR812;ABRL01001405.1/19095-18926 65489:Oryza barthii
Length = 170
Score = 111 bits (56), Expect = 5e-24
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
|||||| ||||||||||| ||||| |||||||||||||| ||| ||| |||||| |||||
Sbjct: 63 ataagttacgagtaaagtcctattaatgttttatcatctcataacaataaaaatactaat 122
Query: 172 tataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||| ||||||||||||||| ||||||||| ||| ||||| ||||
Sbjct: 123 tataaataatttcaaataagacgaacgatcaaaattgagcgcgaaaac 170
>RF01062;MIR812;AP008207.1/21491769-21491941 39947:Oryza sativa
Japonica Group
Length = 173
Score = 111 bits (56), Expect = 5e-24
Identities = 90/100 (90%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| |||||| |||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 64 cataagtcacacataaagtgctattcatgttttatcatctcataacaacaaaaatactaa 123
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgg 209
|||| |||||||||||||||||||||| ||||||||||||
Sbjct: 124 ttataaaaaaatttcaaataagacagatgatcaaagttgg 163
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 174 taaaaaatttcaaataagacagacgatcaaagttg 208
|||||| ||| ||||||||||||||||| ||||||
Sbjct: 47 taaaaatttttaaataagacagacgatcgaagttg 13
>RF01062;MIR812;AACV01010271.1/7593-7765 39947:Oryza sativa Japonica
Group
Length = 173
Score = 111 bits (56), Expect = 5e-24
Identities = 90/100 (90%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| |||||||| ||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 64 cataagtcacaagtaaagtcttattcatgttttatcatctcataacaataaaaatgctaa 123
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgg 209
|||| ||||||||| ||||||||| |||||||||| ||||
Sbjct: 124 ttataaaaaaattttaaataagacggacgatcaaatttgg 163
>RF01062;MIR812;AACV01008716.1/21724-21892 39947:Oryza sativa
Japonica Group
Length = 169
Score = 111 bits (56), Expect = 5e-24
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 116 gtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaattata 175
||||||||||||||||||||||| ||||||||||| ||| ||| |||||| ||| | |||
Sbjct: 66 gtcacgagtaaagtactattcatcttttatcatctcataacaataaaaatactactcata 125
Query: 176 aaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||||||||||| ||||| |||||||| |||| ||||
Sbjct: 126 aaaaatttcaaataagacgaacgatgaaagttggacgcgaaaac 169
>RF01062;MIR812;AP003835.4/38107-38280 39947:Oryza sativa Japonica
Group
Length = 174
Score = 111 bits (56), Expect = 5e-24
Identities = 93/104 (89%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||| |||||||||||||||||||||||| ||| ||| |||||| |||
Sbjct: 64 cataagtcacgagtagagtactattcatgttttatcatctcataacaacaaaaatattaa 123
Query: 171 ttataaaa-aatttcaaataagacagacgatcaaagttgggcgc 213
|||||||| ||||||||||||| |||||||||||||| ||||
Sbjct: 124 ttataaaattttttcaaataagacggacgatcaaagttgagcgc 167
>RF01062;MIR812;AAAA02011051.1/19891-19721 39946:Oryza sativa Indica
Group
Length = 171
Score = 111 bits (56), Expect = 5e-24
Identities = 90/100 (90%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| |||| |||| ||||||||| ||| ||| |||||| ||||
Sbjct: 62 cataagtcacgagtaaagtattatttatgtcttatcatctcataacaacaaaaatactaa 121
Query: 171 ttataaaaaa-tttcaaataagacagacgatcaaagttgg 209
|||||||||| |||||||||||| |||||||||||||||
Sbjct: 122 ttataaaaaattttcaaataagatggacgatcaaagttgg 161
>RF01062;MIR812;AP008215.1/2023967-2023806 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 5e-24
Identities = 87/96 (90%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||| |||||||||||||| ||| || |||||| ||||
Sbjct: 52 cataagtcacgagtaaagtactatttatgttttatcatctcataataataaaaatactaa 111
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaag 205
|||| ||||||||||||||||||| ||||||||||
Sbjct: 112 ttataaaaaaatttcaaataagacgaacgatcaaag 147
>RF01062;MIR812;AAAA02021889.1/14885-15055 39946:Oryza sativa Indica
Group
Length = 171
Score = 111 bits (56), Expect = 5e-24
Identities = 86/96 (89%)
Strand = Plus / Plus
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaattt 183
||||||||||||||||||||||||||| ||| || |||||| |||||||||||||||||
Sbjct: 76 taaagtactattcatgttttatcatctcataataataaaaatactaattataaaaaattt 135
Query: 184 caaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| | ||||||||||| |||||||||
Sbjct: 136 taaataagacaaattatcaaagttggacgcggaaac 171
>RF01062;MIR812;AACV01001141.1/8371-8200 39947:Oryza sativa Japonica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 87/96 (90%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||| |||||||||||||||||| ||||||||| | ||| ||| |||||||||||
Sbjct: 63 cataagtcatgagtaaagtactattcatattttatcatttcataacaacaaaaatgctaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaag 205
|||| |||||||||||||||||| ||| ||||||||
Sbjct: 123 ttatgaaaaaatttcaaataagatagatgatcaaag 158
>RF01062;MIR812;AAAA02032579.1/242-413 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 98/111 (88%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||| | |||||||||||||||||| ||||||||||||||| ||| |||||| ||||
Sbjct: 62 cataagttatgagtaaagtactattcatattttatcatcttataacaacaaaaatactaa 121
Query: 171 ttataaaaa--atttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||||||| ||| ||||||||| ||||||||||||| | |||||||||
Sbjct: 122 ttataaaaattttttaaaataagacggacgatcaaagttagacgcggaaac 172
>RF01062;MIR812;AACV01000150.1/583-737 39947:Oryza sativa Japonica
Group
Length = 155
Score = 111 bits (56), Expect = 5e-24
Identities = 84/92 (91%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 129 tactattcatgttttatcatcttatatcaagaaaaatgctaattat-aaaaaatttcaaa 187
|||| ||||||||||||||||||||| ||| ||||||||||||||| |||||| ||||||
Sbjct: 64 tactgttcatgttttatcatcttataacaacaaaaatgctaattataaaaaaaattcaaa 123
Query: 188 taagacagacgatcaaagttgggcgcggaaac 219
|||||| |||||||||||||| ||||| ||||
Sbjct: 124 taagacggacgatcaaagttgagcgcgaaaac 155
>RF01058;MIR806;AAAA02032712.1/19270-19031 39946:Oryza sativa Indica
Group
Length = 240
Score = 111 bits (56), Expect = 5e-24
Identities = 123/144 (85%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| |||||||||| |||||||||||| | || ||| ||| |||||| ||||
Sbjct: 145 cataagtcacgcgtaaagtacttttcatgttttataacctaataacaataaaaatactaa 86
Query: 171 ttataaaa-aatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgc 229
| |||||| ||||||||||||||| |||| ||||| |||| | ||||||| |||| |||
Sbjct: 85 tcataaaataatttcaaataagacggacggtcaaaattggacatggaaactcatggttgc 26
Query: 230 atttattttggaacggaggaagta 253
||||||||| ||||||||||||
Sbjct: 25 gcttattttgggacggaggaagta 2
Score = 56.0 bits (28), Expect = 3e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 182 ttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgcatttattttgga 241
|||||||||||| ||||| |||||||| | |||||||| |||||||| |||||||||
Sbjct: 168 ttcaaataagacgaacgattaaagttggacacggaaactcatggctgcgcttattttggg 227
Query: 242 acggaggaagta 253
| ||||| ||||
Sbjct: 228 atggagggagta 239
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 23 ctccgtcccaaaataagtgcagccatagttttccgtgtctaattttgaccattcgtctta 82
||||||||||||||||| ||| |||| ||||| |||| |||||||||| | |||||||
Sbjct: 8 ctccgtcccaaaataagcgcaaccatgagtttccatgtccaattttgaccgtccgtctta 67
Query: 83 ttt 85
|||
Sbjct: 68 ttt 70
>RF01062;MIR812;AACV01017406.1/31277-31108 39947:Oryza sativa
Japonica Group
Length = 170
Score = 109 bits (55), Expect = 2e-23
Identities = 88/99 (88%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| |||||||||||||||||||||||||||| ||| ||| |||||| |||
Sbjct: 62 cataagtcacttgtaaagtactattcatgttttatcatctcataacaacaaaaatattaa 121
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgg 209
||||||||| ||||||||| ||| ||||||||||||||
Sbjct: 122 ttataaaaagattcaaataaaacaaacgatcaaagttgg 160
>RF01062;MIR812;AAAA02022762.1/25747-25574 39946:Oryza sativa Indica
Group
Length = 174
Score = 109 bits (55), Expect = 2e-23
Identities = 98/111 (88%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||| |||||||||||||| |||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 64 cataattcacgagtaaagtagtattcatgttttattatcttataacaacaaaattgctaa 123
Query: 171 ttataaaaaat-ttcaaataagacagacgatcaaagttgggcgcggaaact 220
||||||||| | || |||||||| ||||||||||||||| ||| ||||||
Sbjct: 124 ttataaaaagtatttaaataagatggacgatcaaagttggacgctgaaact 174
>RF01062;MIR812;AP008212.1/4136542-4136710 39947:Oryza sativa
Japonica Group
Length = 169
Score = 109 bits (55), Expect = 2e-23
Identities = 89/99 (89%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| ||||||||||||||| ||||||||||| ||| ||| |||||| |||
Sbjct: 62 cataagtcacgcataaagtactattcatattttatcatctaataacaataaaaatattaa 121
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgg 209
|||||||||| ||||||||||| ||||||||||||||||
Sbjct: 122 ttataaaaaa-ttcaaataagatagacgatcaaagttgg 159
>RF01062;MIR812;AACV01011713.1/13667-13835 39947:Oryza sativa
Japonica Group
Length = 169
Score = 109 bits (55), Expect = 2e-23
Identities = 89/99 (89%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| |||||| ||||||| |||||||||||||||||| ||| |||||| ||||
Sbjct: 60 cataagtcactagtaaattactatttatgttttatcatcttataacaacaaaaatactaa 119
Query: 171 ttataaaaaa-tttcaaataagacagacgatcaaagttg 208
|||||||||| ||||||||||||| ||| || |||||||
Sbjct: 120 ttataaaaaattttcaaataagacggacaattaaagttg 158
>RF01062;MIR812;AAAA02010446.1/17902-18064 39946:Oryza sativa Indica
Group
Length = 163
Score = 109 bits (55), Expect = 2e-23
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||| ||||||||||||||||||||||||||| ||| ||| |||||| |||
Sbjct: 55 cataagtcacgaataaagtactattcatgttttatcatctcataacaataaaaatattaa 114
Query: 171 ttataaaaaatttcaaataagac 193
||| |||||||||||||||||||
Sbjct: 115 ttaaaaaaaatttcaaataagac 137
>RF01062;MIR812;AACV01012067.1/1001-829 39947:Oryza sativa Japonica
Group
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 92/103 (89%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||| ||| |||||||||||||||||||||| ||| || ||||| |||||
Sbjct: 64 cataagtcacgagcaaaatactattcatgttttatcatctcataataacaaaaacgctaa 123
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcg 212
|||| ||||||||| ||||||||| ||||||||||||| ||||
Sbjct: 124 ttataaaaaaattttaaataagacggacgatcaaagttaggcg 166
>RF01062;MIR812;AAAA02007810.1/5543-5371 39946:Oryza sativa Indica
Group
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 99/111 (89%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaa-tgcta 169
|||||||||| |||||||| ||||| | ||||||||||||||| ||| ||||| |||||
Sbjct: 63 cataagtcactggtaaagtattattcttattttatcatcttataacaacaaaaaatgcta 122
Query: 170 attataaaa-aatttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||||||| ||||||||||||||| ||||||||||||| ||||| |||||
Sbjct: 123 attataaaaaaatttcaaataagacggacgatcaaagtttggcgcagaaac 173
>RF01062;MIR812;AP008212.1/5981335-5981494 39947:Oryza sativa
Japonica Group
Length = 160
Score = 109 bits (55), Expect = 2e-23
Identities = 88/99 (88%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||
Sbjct: 52 cataagtcacgagtaaagtactattcatgttttatcatcttataacaacaaaaatactaa 111
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgg 209
||| ||| ||| |||||||| | ||||||||| ||||
Sbjct: 112 ttacaaatttttttaaataagataaacgatcaaatttgg 150
>RF01062;MIR812;AAAA02000785.1/29566-29399 39946:Oryza sativa Indica
Group
Length = 168
Score = 107 bits (54), Expect = 8e-23
Identities = 97/110 (88%), Gaps = 6/110 (5%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||| ||||||||||||| |||||||||| ||| |||||| ||||
Sbjct: 64 cataagtcacgagtatagtactattcatgctttatcatctcata-----aaaaatactaa 118
Query: 171 ttataaaa-aatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||| ||||||||||||||| |||||| ||||||||||| ||||||
Sbjct: 119 ttataaaaaaatttcaaataagacggacgattaaagttgggcgtggaaac 168
>RF01062;MIR812;AAAA02022381.1/2540-2699 39946:Oryza sativa Indica
Group
Length = 160
Score = 107 bits (54), Expect = 8e-23
Identities = 85/94 (90%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||||
Sbjct: 52 ataagtcacgagtaaagtactattcatgttttatcatctcataacaacaaaaatactaat 111
Query: 172 tataaaaa-atttcaaataagacagacgatcaaa 204
| |||||| |||| |||||| || ||||||||||
Sbjct: 112 tgtaaaaatattttaaataaaacggacgatcaaa 145
>RF01062;MIR812;AP008211.1/21911813-21911642 39947:Oryza sativa
Japonica Group
Length = 172
Score = 107 bits (54), Expect = 8e-23
Identities = 97/110 (88%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||| || |||| |||||||||||||| ||| ||| |||||| ||||
Sbjct: 63 cataagtcacgagtaaaatattatttatgttttatcatctcataacaacaaaaatactaa 122
Query: 171 ttataaaa-aatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||| |||||||||||||| || |||||||||||| | |||||||
Sbjct: 123 ttataaaataatttcaaataagatggatgatcaaagttggacacggaaac 172
>RF01062;MIR812;AP005175.4/49171-49011 39947:Oryza sativa Japonica
Group
Length = 161
Score = 107 bits (54), Expect = 8e-23
Identities = 85/94 (90%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
||||||||||||||||||||||||||||||||||||| | ||| ||| |||||| |||||
Sbjct: 53 ataagtcacgagtaaagtactattcatgttttatcatatcataacaataaaaatactaat 112
Query: 172 tataaaaa-atttcaaataagacagacgatcaaa 204
| |||||| |||| |||||| |||||||||||||
Sbjct: 113 tgtaaaaatattttaaataaaacagacgatcaaa 146
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 181 tttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||||||||||| |||||| ||||||||||||||||
Sbjct: 40 tttcaaataagacgaacgatcgaagttgggcgcggaaa 3
>RF01062;MIR812;AP008213.1/23885583-23885754 39947:Oryza sativa
Japonica Group
Length = 172
Score = 107 bits (54), Expect = 8e-23
Identities = 97/110 (88%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||| |||||||||||||||||||||||||||||||| ||| ||| |||||| | ||
Sbjct: 63 cataagttacgagtaaagtactattcatgttttatcatctcataacaataaaaatacaaa 122
Query: 171 ttataaaaaa-tttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| ||| ||||||||| ||||| |||||||| ||||||||
Sbjct: 123 ttataaaaaatttttaaataagacgaacgattaaagttggatgcggaaac 172
>RF01062;MIR812;AAAA02020785.1/3441-3270 39946:Oryza sativa Indica
Group
Length = 172
Score = 107 bits (54), Expect = 8e-23
Identities = 97/110 (88%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||| ||||||||| || ||||||||||||||||||||||| || |||||| ||||
Sbjct: 63 cataagttacgagtaaaatattattcatgttttatcatcttataataacaaaaatactaa 122
Query: 171 tt-ataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|| | ||||||||| |||||||| |||||| ||||||||||||||||||
Sbjct: 123 ttaaaaaaaaattttaaataagatggacgattaaagttgggcgcggaaac 172
Score = 48.1 bits (24), Expect = 6e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
|||||| |||||||||||| |||| ||||||||| ||||||||
Sbjct: 45 aaaaaaattcaaataagacggacggtcaaagttgaacgcggaaa 2
>RF01062;MIR812;AAAA02017731.1/1018-850 39946:Oryza sativa Indica
Group
Length = 169
Score = 107 bits (54), Expect = 8e-23
Identities = 98/110 (89%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| |||| || ||||||||||||||||||||||| ||| |||||| ||||
Sbjct: 59 cataagtcacgcataaaatattattcatgttttatcatcttataacaacaaaaatactaa 118
Query: 171 ttat-aaaaaatttcaaataagaca-gacgatcaaagttgggcgcggaaa 218
|||| |||||| ||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 119 ttataaaaaaaattcaaataagacatgacgatcaaagatgggcacggaaa 168
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagtt 207
||||||||||||||||||| |||||||||||||
Sbjct: 45 aaaaaatttcaaataagacggacgatcaaagtt 13
>RF01062;MIR812;AL731585.5/116334-116173 4530:Oryza sativa (rice)
Length = 162
Score = 107 bits (54), Expect = 8e-23
Identities = 97/110 (88%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||| ||||||||||| ||| ||| ||||| |||
Sbjct: 53 cataagtcacgagtaaagtactattcatattttatcatctcataacaatcaaaatattaa 112
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||||||||||||||| || ||||||||||| ||| ||||||
Sbjct: 113 ttataaaaaaatttcaaataagatggatgatcaaagttgagcgtggaaac 162
>RF01062;MIR812;AP008217.1/4350763-4350922 39947:Oryza sativa
Japonica Group
Length = 160
Score = 107 bits (54), Expect = 8e-23
Identities = 97/110 (88%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||| |||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 51 cataagtcacgagtaaagtaccattcatgttttatcatctcataacaacaaaaatactaa 110
Query: 171 ttataaaaaatttcaaataagacagac-gatcaaagttgggcgcggaaac 219
|||||| ||| || ||||||||| | | ||||||||||| ||||| ||||
Sbjct: 111 ttataacaaaattaaaataagaccggcagatcaaagttgagcgcgaaaac 160
>RF01062;MIR812;AY946410.1/199-31 4530:Oryza sativa (rice)
Length = 169
Score = 107 bits (54), Expect = 8e-23
Identities = 97/110 (88%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||| ||||||||||||| |||||||||||| ||| ||| |||||| ||||
Sbjct: 60 cataagtcacgagcaaagtactattcacgttttatcatctcataacaataaaaatactaa 119
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||| ||||| || || |||||||||||||| ||||||||||
Sbjct: 120 ttataaaaaaaattcaagtagaacggacgatcaaagttgagcgcggaaac 169
>RF01062;MIR812;AACV01021279.1/8207-8378 39947:Oryza sativa Japonica
Group
Length = 172
Score = 107 bits (54), Expect = 8e-23
Identities = 97/110 (88%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| ||||||||||||||||||||||||||| || ||| |||||| ||||
Sbjct: 63 cataagtcacgtataaagtactattcatgttttatcatctcatgacaataaaaatactaa 122
Query: 171 ttataaaa-aatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||| ||||| ||||||||| |||||||||| || | |||||||||
Sbjct: 123 ttataaaacaattttaaataagacggacgatcaaaattagacgcggaaac 172
>RF01062;MIR812;AACV01002836.1/11946-11782 39947:Oryza sativa
Japonica Group
Length = 165
Score = 107 bits (54), Expect = 8e-23
Identities = 97/108 (89%), Gaps = 5/108 (4%)
Strand = Plus / Plus
Query: 113 taagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatt 172
||||||||||||||| ||||||| |||||||||||||||||| | |||||| | ||||
Sbjct: 62 taagtcacgagtaaaatactatttatgttttatcatcttata---aaaaaaatac-aatt 117
Query: 173 at-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|| |||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 118 ataaaaaaatttcaaataagacagatgatcaaagttgagcgcggaaac 165
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 181 tttcaaataagacagacgatcaaagtt 207
|||||||||||||||||||||||||||
Sbjct: 39 tttcaaataagacagacgatcaaagtt 13
>RF01062;MIR812;AACV01017339.1/8113-8283 39947:Oryza sativa Japonica
Group
Length = 171
Score = 107 bits (54), Expect = 8e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||||||| |||||||||| ||| ||| |||||||||||
Sbjct: 62 cataagtcacgagtaaagtactattcatgctttatcatctcataacaacaaaaatgctaa 121
Query: 171 ttataaaaaa 180
||||||||||
Sbjct: 122 ttataaaaaa 131
>RF01062;MIR812;AACV01008241.1/3292-3120 39947:Oryza sativa Japonica
Group
Length = 173
Score = 107 bits (54), Expect = 8e-23
Identities = 83/90 (92%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaa-tgctaattataaaa-aat 181
||||||||||||||||||||||||||| ||| ||| ||||| | |||||||||||| |||
Sbjct: 76 taaagtactattcatgttttatcatctcataacaacaaaaaatactaattataaaaaaat 135
Query: 182 ttcaaataagacagacgatcaaagttgggc 211
||||||||||||||||||||||| ||||||
Sbjct: 136 ttcaaataagacagacgatcaaaattgggc 165
>RF01062;MIR812;AAAA02003808.1/33045-32875 39946:Oryza sativa Indica
Group
Length = 171
Score = 107 bits (54), Expect = 8e-23
Identities = 87/98 (88%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||| ||| ||||||| ||| ||| |||||| ||||
Sbjct: 63 cataagtcacgagtaaagtactattcatatttcatcatctcataacaacaaaaatactaa 122
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttg 208
|| |||||| ||||||||||||| || ||| |||||||
Sbjct: 123 ttgtaaaaattttcaaataagacggatgataaaagttg 160
>RF01062;MIR812;AP008209.1/5420310-5420125 39947:Oryza sativa
Japonica Group
Length = 186
Score = 107 bits (54), Expect = 8e-23
Identities = 97/110 (88%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
|||||||||||||||||||||||| |||||||||||||| ||| ||| |||||| |||||
Sbjct: 77 ataagtcacgagtaaagtactatttatgttttatcatctcataacaataaaaatactaat 136
Query: 172 tat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaact 220
||| |||||||||||||||| || ||||| ||| |||| ||| ||||||
Sbjct: 137 tataaaaaaatttcaaataaaacgaacgattaaaattggacgcagaaact 186
>RF01062;MIR812;AP005685.3/37016-36858 39947:Oryza sativa Japonica
Group
Length = 159
Score = 107 bits (54), Expect = 8e-23
Identities = 87/97 (89%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||| |||||||||||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 52 cataagtcatgagtaaagtactattcatgttttatcatctcataacaacaaaaatactaa 111
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagtt 207
||||||||||| ||||||||| ||||||||||||
Sbjct: 112 --ataaaaaattttaaataagacgaacgatcaaagtt 146
>RF01062;MIR812;AACV01009794.1/11451-11280 39947:Oryza sativa
Japonica Group
Length = 172
Score = 107 bits (54), Expect = 8e-23
Identities = 97/110 (88%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| | ||||||||||||||||||||||||||| || ||| |||||||||||
Sbjct: 63 cataagtcacaaataaagtactattcatgttttatcatctcgtaacaataaaaatgctaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| ||||||||||||||||| | ||||| ||| ||| ||||||||||
Sbjct: 123 ttataaaaaaatttcaaataagtcgaacgattaaaattgagcgcggaaac 172
>RF01062;MIR812;AACV01014495.1/45963-46136 39947:Oryza sativa
Japonica Group
Length = 174
Score = 107 bits (54), Expect = 8e-23
Identities = 89/100 (89%), Gaps = 3/100 (3%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||||||| |||||||||| ||| ||| |||||||||||
Sbjct: 63 cataagtcacgagtaaagtactattcatgctttatcatctcatagcaacaaaaatgctaa 122
Query: 171 ttata---aaaaatttcaaataagacagacgatcaaagtt 207
||||| ||||| | ||||||||| |||||||||||||
Sbjct: 123 ttatatataaaaaaattaaataagacggacgatcaaagtt 162
Score = 48.1 bits (24), Expect = 6e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||| |||||||||||| ||| |||||||||||||||||||
Sbjct: 46 aaaaattttcaaataagatgaacggtcaaagttgggcgcggaaa 3
>RF01062;MIR812;AY946429.1/28-188 4530:Oryza sativa (rice)
Length = 161
Score = 107 bits (54), Expect = 8e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||| |||||||||||||||||| ||| |||| ||||||
Sbjct: 52 cataagtcacgagtaaagtactatttatgttttatcatcttataacaacaaaattgctaa 111
Query: 171 ttataaaaaa 180
||||||||||
Sbjct: 112 ttataaaaaa 121
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 52 tttccgtgtctaattttgaccattcgtcttatttaa 87
|||||||||| |||||||| | ||||||||||||||
Sbjct: 160 tttccgtgtccaattttgatcgttcgtcttatttaa 125
>RF01062;MIR812;AP008209.1/27052678-27052511 39947:Oryza sativa
Japonica Group
Length = 168
Score = 107 bits (54), Expect = 8e-23
Identities = 98/110 (89%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||
Sbjct: 60 cataagtcacgagtaaagtactattcatgttttatcatctcataacaacaaaaataataa 119
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||| || ||||||||| |||||| |||||||| |||| ||||
Sbjct: 120 ttataaaaaaaatttaaataagacggacgat-aaagttggacgcgaaaac 168
>RF01062;MIR812;AAAA02036738.1/10015-9844 39946:Oryza sativa Indica
Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 115 agtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaattat 174
|||||||||||||||||||||| | |||||| |||||||| ||| |||||| ||||||||
Sbjct: 67 agtcacgagtaaagtactattcgtattttattatcttataacaacaaaaatactaattat 126
Query: 175 aaaaa-atttcaaataagacagacgatcaaagttggg 210
||||| |||||||||||||| |||||| ||| |||||
Sbjct: 127 aaaaatatttcaaataagacggacgattaaaattggg 163
>RF01062;MIR812;ABRL01002063.1/10967-10809 65489:Oryza barthii
Length = 159
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 50 cataagtcacgagtaaagtactattcatgttttatcatctcataacaacaaaaatactaa 109
Query: 171 ttataaaaa 179
|||||||||
Sbjct: 110 ttataaaaa 118
>RF01062;MIR812;AACV01017448.1/7920-7765 39947:Oryza sativa Japonica
Group
Length = 156
Score = 105 bits (53), Expect = 3e-22
Identities = 81/89 (91%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 132 tattcatgttttatcatcttatatcaagaaaaatgctaattat-aaaaaatttcaaataa 190
||||||||||||||||||| ||| ||| ||||||||||||||| |||||||| |||||||
Sbjct: 68 tattcatgttttatcatctcatagcaacaaaaatgctaattataaaaaaattgcaaataa 127
Query: 191 gacagacgatcaaagttgggcgcggaaac 219
|| |||||||||| ||||||||||||||
Sbjct: 128 tacggacgatcaaaattgggcgcggaaac 156
>RF01062;MIR812;AP008207.1/31033212-31033381 39947:Oryza sativa
Japonica Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 93/105 (88%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| |||| |||||||||||||||||| ||| ||||| |||
Sbjct: 61 cataagtcacgagtaaagtattatttatgttttatcatcttataacaataaaaaaattaa 120
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcg 214
|||| |||||||||||||||| || |||||| |||||||| ||||
Sbjct: 121 ttataaaaaaatttcaaataaaacggacgattaaagttggacgcg 165
>RF01062;MIR812;AP008212.1/18810223-18810054 39947:Oryza sativa
Japonica Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||| |||| |||||||||| ||||||||||||||||||| ||| ||| |||||| |||
Sbjct: 62 catatgtcatgagtaaagtaatattcatgttttatcatctcataacaacaaaaatattaa 121
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
||| ||| ||||||||||||||| |||||||||| |||| | |||||||
Sbjct: 122 ttaaaaataatttcaaataagacggacgatcaaaattggacacggaaac 170
>RF01062;MIR812;AP003335.4/153903-154072 39947:Oryza sativa Japonica
Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 93/105 (88%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||| | ||||||||| |||||||||||||||||||| ||| ||| ||||| ||||
Sbjct: 61 cataagttatgagtaaagttctattcatgttttatcatctcataacaacgaaaatactaa 120
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcg 214
|||| ||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 121 ttataaaaaaattttaaataagacagacgatcaaaattgtgcgcg 165
>RF01062;MIR812;AAAA02025546.1/9729-9897 39946:Oryza sativa Indica
Group
Length = 169
Score = 105 bits (53), Expect = 3e-22
Identities = 86/97 (88%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||| |||| ||||||||||||||| || ||||||| |||
Sbjct: 61 cataagtcacgagtaaagtactagtcatattttatcatcttataataacaaaaatgttaa 120
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagtt 207
|| |||||||||||||||| || || ||||||||||
Sbjct: 121 tttaaaaaaatttcaaataaaacggatgatcaaagtt 157
>RF01062;MIR812;AACV01005899.1/988-1157 39947:Oryza sativa Japonica
Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 96/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
||||||||| ||||||||| |||| |||||||||||||| ||| ||| |||||| |||||
Sbjct: 62 ataagtcacaagtaaagtattatttatgttttatcatctcatagcaataaaaatactaat 121
Query: 172 tataaa-aaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||| |||||| ||||||||| |||||| ||| || |||||||||||
Sbjct: 122 tataaacaaattttaaataagacggacgattaaaattaggcgcggaaac 170
>RF01062;MIR812;AAAA02004346.1/75869-75699 39946:Oryza sativa Indica
Group
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 93/105 (88%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 115 agtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaattat 174
|||||||||||||||||||||||| |||||||||| ||| | | | ||| ||||||||
Sbjct: 68 agtcacgagtaaagtactattcatattttatcatcacataaccactataatactaattat 127
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||| |||||||||| |||||||||||||||||||| ||||
Sbjct: 128 aaaaaatt-caaataagacggacgatcaaagttgggcgcgaaaac 171
>RF01058;MIR806;AP004661.3/132951-132713 39947:Oryza sativa Japonica
Group
Length = 239
Score = 105 bits (53), Expect = 3e-22
Identities = 106/121 (87%), Gaps = 2/121 (1%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| ||||||||||||||||||||||||||| ||| ||| | |||| ||||
Sbjct: 144 cataagtcacacataaagtactattcatgttttatcatctaataacaatagaaatactaa 85
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgc 229
| || ||||||||||||||||||| ||||| |||||||||| |||||||| ||||||||
Sbjct: 84 tcataaaaaaatttcaaataagacgaacgat-aaagttgggcacggaaactcatggctgc 26
Query: 230 a 230
|
Sbjct: 25 a 25
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgca 230
|||||| ||||||||| |||||||||||||||||||| |||||| | |||||||||
Sbjct: 160 aaaaaaattcaaataacacagacgatcaaagttgggcacggaaaatcatggctgca 215
>RF01062;MIR812;AAAA02020840.1/34861-34697 39946:Oryza sativa Indica
Group
Length = 165
Score = 103 bits (52), Expect = 1e-21
Identities = 95/109 (87%), Gaps = 4/109 (3%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||| |||||||||||| | ||| ||| |||||||||||
Sbjct: 61 cataagtcacgagtaaagtactatttatgttttatcatttcatagcaataaaaatgctaa 120
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| ||||||||| |||| |||| |||| |||||||||
Sbjct: 121 ttataaaaaa----aaataagacgaacgaccaaaattggacgcggaaac 165
>RF01062;MIR812;AP003314.3/74968-74797 39947:Oryza sativa Japonica
Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||| |||
Sbjct: 64 cataagtcacgagtaaagtaatattcatgttttatcatctcataacaataaaaatattaa 123
Query: 171 ttataaaaaatttcaaataa 190
||||||||| ||||||||||
Sbjct: 124 ttataaaaattttcaaataa 143
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 181 tttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||||||| ||| ||||||||||||||| ||||||||
Sbjct: 39 tttcaaatatgacggacgatcaaagttggtcgcggaaa 2
>RF01062;MIR812;AAAA02008720.1/621-453 39946:Oryza sativa Indica
Group
Length = 169
Score = 103 bits (52), Expect = 1e-21
Identities = 94/108 (87%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
|||||| |||||||||||| ||||||||||||||||||| ||| ||| |||||| |||||
Sbjct: 62 ataagttacgagtaaagtattattcatgttttatcatctcatagcaacaaaaatactaat 121
Query: 172 tataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||| ||||| |||||||||| | |||||| ||| ||||| ||||
Sbjct: 122 tataaataattttaaataagacaaataatcaaatttgagcgcgaaaac 169
>RF01062;MIR812;AP003203.3/101179-101008 39947:Oryza sativa Japonica
Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 89/100 (89%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| | ||||||||||||||||| ||| ||| |||||| |||
Sbjct: 63 cataagtcacgagtaaagtattgttcatgttttatcatctcataacaacaaaaataataa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgg 209
|||| |||||| ||||||||||| |||||||||||||||
Sbjct: 123 ttataaaaaaaattcaaataagatggacgatcaaagttgg 162
>RF01062;MIR812;AP008207.1/36403836-36403667 39947:Oryza sativa
Japonica Group
Length = 170
Score = 103 bits (52), Expect = 1e-21
Identities = 92/104 (88%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 118 cacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaattat-aa 176
|||||||||||||||||| |||||||||||||| ||| ||| |||||| ||||| || ||
Sbjct: 67 cacgagtaaagtactatttatgttttatcatctcataacaataaaaatactaatcataaa 126
Query: 177 aaaatttcaaataagacagacgatcaaagttgggcgcggaaact 220
|||| || ||||||||| |||||||||||||| |||| ||||||
Sbjct: 127 aaaaatttaaataagacggacgatcaaagttgagcgcagaaact 170
>RF01062;MIR812;AC025907.2/43108-42938 4530:Oryza sativa (rice)
Length = 171
Score = 103 bits (52), Expect = 1e-21
Identities = 77/84 (91%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||| ||| |||||||||||| || ||||||||||||||| ||| |||||||||||
Sbjct: 62 cataagtcccgaataaagtactatttatattttatcatcttataacaacaaaaatgctaa 121
Query: 171 ttataaa-aaatttcaaataagac 193
||||||| ||||||||||||||||
Sbjct: 122 ttataaagaaatttcaaataagac 145
>RF01062;MIR812;AP008208.1/7741344-7741185 39947:Oryza sativa
Japonica Group
Length = 160
Score = 103 bits (52), Expect = 1e-21
Identities = 89/100 (89%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||| || ||||||| ||||||| ||||||||||| ||| ||| |||||| ||||
Sbjct: 51 cataagtcatgaataaagtattattcatattttatcatctcataacaacaaaaatactaa 110
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgg 209
|||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 111 ttataaaaaaaattcaaataaaacagacgatcaaagttgg 150
>RF01062;MIR812;AAAA02026120.1/249-420 39946:Oryza sativa Indica
Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 86/96 (89%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 114 aagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
||||||||||||||||||||||||| ||||||||||| ||| ||| |||||||||| |||
Sbjct: 66 aagtcacgagtaaagtactattcatattttatcatctcataacaataaaaatgctagtta 125
Query: 174 taaaa-aatttcaaataagacagacgatcaaagttg 208
||||| ||||||||||||||||||| |||||||
Sbjct: 126 taaaattttttcaaataagacagacgactaaagttg 161
>RF01062;MIR812;AAAA02022985.1/2863-2691 39946:Oryza sativa Indica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 97/111 (87%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||| |||||||||||||||||||||||||||||||| ||| ||| |||||| |||
Sbjct: 63 cataagtgacgagtaaagtactattcatgttttatcatctcataacaacaaaaataataa 122
Query: 171 ttat--aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||||||||||||||| ||||| ||||||| |||| |||||
Sbjct: 123 ttataaaaaaaatttcaaataagatgaacgattaaagttgagcgcagaaac 173
>RF01062;MIR812;AP008208.1/13044189-13044045 39947:Oryza sativa
Japonica Group
Length = 145
Score = 103 bits (52), Expect = 1e-21
Identities = 86/96 (89%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 125 aaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaat-tt 183
|||||||||||||| ||||||||||| ||| ||| |||||| ||||||||||||| ||
Sbjct: 50 aaagtactattcatattttatcatctcataacaataaaaataataattataaaaaaaatt 109
Query: 184 caaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| ||||||||||||||||| |||||||
Sbjct: 110 caaataagacggacgatcaaagttgggcacggaaac 145
>RF01062;MIR812;AP008210.1/28196407-28196576 39947:Oryza sativa
Japonica Group
Length = 170
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||| ||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 60 cataagtcacgattaaagtactattcatgttttatcatctcataacaacaaaaatgctaa 119
Query: 171 ttataaaa 178
||||||||
Sbjct: 120 ttataaaa 127
>RF01062;MIR812;AJ245900.1/3175-3343 4530:Oryza sativa (rice)
Length = 169
Score = 103 bits (52), Expect = 1e-21
Identities = 90/100 (90%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||| ||||||||||| |||||||||||||| ||| ||| |||||| ||||
Sbjct: 61 cataagtcacgagcaaagtactatttatgttttatcatctcataacaacaaaaatactaa 120
Query: 171 ttataaaaaa-tttcaaataagacagacgatcaaagttgg 209
|||||||||| |||||||||| || ||||||||||||||
Sbjct: 121 ttataaaaaagtttcaaataa-acgaacgatcaaagttgg 159
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgg 209
||||||||||||||||||| |||| ||||||||||
Sbjct: 45 aaaaaatttcaaataagacggacggtcaaagttgg 11
>RF01062;MIR812;AP008212.1/10980126-10979955 39947:Oryza sativa
Japonica Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 89/100 (89%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||| ||||||||||||||| |||| ||| ||| |||||| |||
Sbjct: 63 cataagtcacgagtaaagtgctattcatgttttataatctcataacaacaaaaatagtaa 122
Query: 171 ttataaaaaa-tttcaaataagacagacgatcaaagttgg 209
|||||||||| |||||||||||| |||||| ||||||||
Sbjct: 123 ttataaaaaattttcaaataagatggacgattaaagttgg 162
>RF01062;MIR812;AAAA02033569.1/7697-7869 39946:Oryza sativa Indica
Group
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 98/111 (88%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaa-gaaaaatgcta 169
||||||||||||| ||||||||||||||| |||||||||| ||| ||| ||||||| ||
Sbjct: 63 cataagtcacgagaaaagtactattcatgatttatcatctcatagcaacaaaaaatgtta 122
Query: 170 attat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||| |||||||||||||||| | ||||||| |||||||| |||| ||||
Sbjct: 123 attataaaaaaatttcaaataaaatagacgataaaagttggacgcgaaaac 173
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
|||||| |||||||||||| ||| |||||||||||||||||||
Sbjct: 46 aaaaaaattcaaataagacgaacggtcaaagttgggcgcggaaa 3
>RF01062;MIR812;AAAA02015545.1/24306-24475 39946:Oryza sativa Indica
Group
Length = 170
Score = 101 bits (51), Expect = 5e-21
Identities = 87/99 (87%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| || |||||||||||||||| ||| ||| |||||| ||||
Sbjct: 62 cataagtcacgagtaaagtaatactcatgttttatcatctcataacaacaaaaatactaa 121
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgg 209
|||||||||| || |||||| || ||| |||||| ||||
Sbjct: 122 ttataaaaaaatttaaataaaaccgactatcaaaattgg 160
>RF01062;MIR812;AACV01017236.1/11638-11467 39947:Oryza sativa
Japonica Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 85/95 (89%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcat-cttatatcaagaaaaatgcta 169
|||||||||| ||||||||||||||||| ||||||||| |||||| ||| |||||| |||
Sbjct: 63 cataagtcaccagtaaagtactattcatcttttatcatccttataacaacaaaaatccta 122
Query: 170 attataaaaaatttcaaataagacagacgatcaaa 204
||||||||||| |||||||||| ||||||||||
Sbjct: 123 attataaaaaaaatcaaataagatggacgatcaaa 157
>RF01062;MIR812;AC118347.2/114612-114782 39947:Oryza sativa Japonica
Group
Length = 171
Score = 101 bits (51), Expect = 5e-21
Identities = 88/99 (88%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| |||| |||||||||||||| ||| ||| ||||| ||||
Sbjct: 62 cataagtcacgagtaaagtattattaatgttttatcatctcataacaaccaaaatactaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttg 208
|||| |||||| || ||||||||| ||||||||||||||
Sbjct: 122 ttataaaaaaaatttaaataagacggacgatcaaagttg 160
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcg 214
||||||||||||||||||| |||| |||||||| ||||||
Sbjct: 45 aaaaaatttcaaataagacggacggtcaaagttaggcgcg 6
>RF01062;MIR812;AAAA02033258.1/7726-7553 39946:Oryza sativa Indica
Group
Length = 174
Score = 101 bits (51), Expect = 5e-21
Identities = 91/104 (87%), Gaps = 4/104 (3%)
Strand = Plus / Plus
Query: 120 cgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaattat----a 175
|||||||||||||||| |||||||||||||| ||| ||| ||||||||||||||| |
Sbjct: 71 cgagtaaagtactatttatgttttatcatctcataacaacaaaaatgctaattataaaaa 130
Query: 176 aaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||| || ||||||||| |||||||||| |||| |||||||||
Sbjct: 131 aaaaaatttaaataagacggacgatcaaaattggacgcggaaac 174
>RF01062;MIR812;AACV01002156.1/15981-15811 39947:Oryza sativa
Japonica Group
Length = 171
Score = 101 bits (51), Expect = 5e-21
Identities = 88/99 (88%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||| |||| |||| || ||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 62 cataagtaacgaataaaatattattcatgttttatcatctcataacaataaaaatactaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttg 208
|| | ||||||||||||||||||| ||||||||||||||
Sbjct: 122 ttgtaaaaaaatttcaaataagacggacgatcaaagttg 160
>RF01062;MIR812;AACV01014495.1/46718-46548 39947:Oryza sativa
Japonica Group
Length = 171
Score = 101 bits (51), Expect = 5e-21
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||| |||
Sbjct: 62 cataagtcacgagtaaagtactatttatgttttatcatctcatagcaacaaaaatattaa 121
Query: 171 ttataaaaaa-tttcaaataaga 192
|||||||||| ||||||||||||
Sbjct: 122 ttataaaaaattttcaaataaga 144
Score = 58.0 bits (29), Expect = 7e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||| |||||||||||||||||||| ||| |||| |||||||||
Sbjct: 45 aaaaattttcaaataagacagacgattaaaattggacgcggaaac 1
>RF01062;MIR812;AC132483.2/71128-71287 39947:Oryza sativa Japonica
Group
Length = 160
Score = 101 bits (51), Expect = 5e-21
Identities = 85/95 (89%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||| ||||||| |||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 51 cataagtcatgagtaaaatactattcatgttttatcatctcataacaacaaaaatactaa 110
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaa 204
|||| |||||| |||||||||||| ||| ||||||
Sbjct: 111 ttataaaaaaaattcaaataagacggacaatcaaa 145
>RF01062;MIR812;AAAA02017459.1/30794-30625 39946:Oryza sativa Indica
Group
Length = 170
Score = 101 bits (51), Expect = 5e-21
Identities = 91/103 (88%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||| |||| ||||||| |||||||||||||| ||| ||| |||||| ||||
Sbjct: 61 cataagtcacgaataaaatactatttatgttttatcatctcataacaacaaaaatactaa 120
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcg 212
|||| ||||||||| ||||||||| ||||||||| |||||||
Sbjct: 121 ttataaaaaaattttaaataagacgaacgatcaaatttgggcg 163
>RF01062;MIR812;AAAA02004773.1/10543-10373 39946:Oryza sativa Indica
Group
Length = 171
Score = 101 bits (51), Expect = 5e-21
Identities = 94/107 (87%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 114 aagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
|||||||||||||||||||||| | | |||||||||||||| ||| |||||| |||||||
Sbjct: 65 aagtcacgagtaaagtactattaaagctttatcatcttataacaataaaaatactaatta 124
Query: 174 t-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
| |||||| || ||||||||| ||||| |||||||| |||||||||
Sbjct: 125 taaaaaaaatttaaataagacgaacgattaaagttggacgcggaaac 171
>RF01062;MIR812;AAAA02011074.1/102108-101937 39946:Oryza sativa
Indica Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 89/99 (89%), Gaps = 2/99 (2%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| ||||||||||||||||||| ||| || |||||| ||||
Sbjct: 64 cataagtcacgagtaaagtattattcatgttttatcatctcata-gaacaaaaatactaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttg 208
|||| |||||||||||||||| || |||||| |||||||
Sbjct: 123 ttataaaaaaatttcaaataaaacggacgattaaagttg 161
>RF01062;MIR812;AP008213.1/4700491-4700319 39947:Oryza sativa
Japonica Group
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 130 actattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaatttcaaata 189
||||||||||||||||||||||||| ||| |||||| || ||||||||||| ||||||||
Sbjct: 84 actattcatgttttatcatcttataacaataaaaatacttattataaaaaaattcaaata 143
Query: 190 agacagacgat 200
|||||||||||
Sbjct: 144 agacagacgat 154
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 101 bits (51), Expect = 5e-21
Identities = 113/131 (86%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaat-t 182
|||||||||||| || |||||| |||| ||| ||| |||| | |||||||||||||| |
Sbjct: 131 taaagtactatttatattttataatctaataacaataaaa-tactaattataaaaaaaat 73
Query: 183 tcaaataagacagacgatcaaagttgggcgcggaaacttatggctgcatttattttggaa 242
||||||||||||||||||||||||| | | |||||||| |||||||| ||||||||| |
Sbjct: 72 tcaaataagacagacgatcaaagttagacacggaaactcatggctgcgcttattttggga 13
Query: 243 cggaggaagta 253
|||||| ||||
Sbjct: 12 cggagggagta 2
Score = 56.0 bits (28), Expect = 3e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 23 ctccgtcccaaaataagtgcagccatagttttccgtgtctaattttga 70
||||||||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 8 ctccgtcccaaaataagcgcagccatgagtttccgtgtctaactttga 55
>RF01062;MIR812;ABRL01000082.1/33-204 65489:Oryza barthii
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 96/110 (87%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||| ||||| ||||||||||||| ||||||||||||| ||| ||| ||||||| |||
Sbjct: 63 cataagccacgaataaagtactattcttgttttatcatctcataacaaaaaaaatgttaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||| || ||||||||| |||||||||||||| |||| ||||
Sbjct: 123 ttataaaaaaaatttaaataagacgaacgatcaaagttggtcgcgaaaac 172
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||| ||||| |||||||| ||| |||||||||||||||||||
Sbjct: 46 aaaaattttcagataagacaaacggtcaaagttgggcgcggaaa 3
>RF01062;MIR812;AAAA02008040.1/12102-12272 39946:Oryza sativa Indica
Group
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 90/102 (88%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| ||||||||||||||||||||||||||||||| || |||| | ||||
Sbjct: 62 cataagtcacatataaagtactattcatgttttatcatcttataataataaaactactaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggc 211
|||| |||||||||||||||| || ||||||||||| |||||
Sbjct: 122 ttataaaaaaatttcaaataaaacggacgatcaaagctgggc 163
>RF01062;MIR812;AP005067.2/163518-163349 39947:Oryza sativa Japonica
Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| ||||||| |||||||||||||| |||||||| ||| |||||| |||
Sbjct: 63 cataagtcacgcataaagtattattcatgttttattatcttatagcaataaaaatattaa 122
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttg 208
| |||||||| ||||||||| | |||||||||||||||
Sbjct: 123 tcataaaaaaattcaaataaaatagacgatcaaagttg 160
>RF01062;MIR812;AP003928.3/22059-21890 39947:Oryza sativa Japonica
Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 87/98 (88%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| ||||||| ||| |||||||||||||||| ||| ||| |||||| ||||
Sbjct: 61 cataagtcacgtgtaaagtgctactcatgttttatcatctcataacaataaaaatactaa 120
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagtt 207
|||| |||||||||||||||||||| | || |||||||
Sbjct: 121 ttataaaaaaatttcaaataagacaaaagaacaaagtt 158
>RF01062;MIR812;AP008218.1/23369827-23369655 39947:Oryza sativa
Japonica Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 96/110 (87%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||| |||||||||| | ||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 64 cataagtcgtgagtaaagtaatgttcatgttttatcatctgataacaacaaaaatactaa 123
Query: 171 ttataaaaa-atttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||||||| | |||||||||||| |||||||||| |||| | |||||||
Sbjct: 124 ttataaaaagaattcaaataagacggacgatcaaaattggacacggaaac 173
>RF01062;MIR812;AAAA02003647.1/3308-3140 39946:Oryza sativa Indica
Group
Length = 169
Score = 99.6 bits (50), Expect = 2e-20
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaattt 183
||||||||||||||| ||||||||||| ||| ||| |||||| | |||||||||||| ||
Sbjct: 74 taaagtactattcatattttatcatctcataacaataaaaataccaattataaaaaaatt 133
Query: 184 caaataagacagacgatcaaagttgg 209
||||||||| |||||||||||||||
Sbjct: 134 taaataagacggacgatcaaagttgg 159
>RF01062;MIR812;AACV01002106.1/12557-12390 39947:Oryza sativa
Japonica Group
Length = 168
Score = 99.6 bits (50), Expect = 2e-20
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaattt 183
|||||||||||| || ||||||||||| ||| ||| |||||| |||||||||||||||||
Sbjct: 73 taaagtactattaatattttatcatctcataacaataaaaatactaattataaaaaattt 132
Query: 184 caaataagacagacgatcaaagttgg 209
|||||||||| |||||| ||| ||||
Sbjct: 133 caaataagacggacgattaaaattgg 158
>RF01062;MIR812;AC212268.1/23505-23677 4538:Oryza glaberrima
(African rice)
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 93/106 (87%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 115 agtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaattat 174
||||||| ||||||| ||||||||||||||||||||||| | | |||||| |||||||
Sbjct: 68 agtcacgtataaagtattattcatgttttatcatcttataacgacaaaaatactaattac 127
Query: 175 aa-aaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|| ||| ||||||||||||||||||| |||||| |||||||||||
Sbjct: 128 aacaaattttcaaataagacagacgactaaagtttggcgcggaaac 173
>RF01062;MIR812;AAAA02009348.1/7059-7217 39946:Oryza sativa Indica
Group
Length = 159
Score = 99.6 bits (50), Expect = 2e-20
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| ||| ||||||||||||||||||||| ||| ||| |||||| |||
Sbjct: 51 cataagtcacgtataaggtactattcatgttttatcattccataacaataaaaatattaa 110
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttg 208
|||||||||| ||||||||||||||||||||||||||
Sbjct: 111 ttataaaaaaaatcaaataagacagacgatcaaagttg 148
>RF01062;MIR812;AP008208.1/18863983-18864152 39947:Oryza sativa
Japonica Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 96/110 (87%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||| |||||||||| ||||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 61 cataaatcacgagtaatgtactattcatgttttatcatctcataacaataaaaatactaa 120
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||| || ||||||||| ||||| |||||| |||| ||||||
Sbjct: 121 ttataaaaaaaattaaaataagacgaacgattaaagttaggcgtggaaac 170
>RF01062;MIR812;AP008214.1/8842812-8842970 39947:Oryza sativa
Japonica Group
Length = 159
Score = 99.6 bits (50), Expect = 2e-20
Identities = 96/110 (87%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||| |||||||||||| ||||||||| |||| ||| ||| |||||| ||||
Sbjct: 50 cataagtcacgaataaagtactatttatgttttattatctcataacaacaaaaatactaa 109
Query: 171 ttataaaa-aatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||| ||||||||||||| || |||||||||| || ||||||||
Sbjct: 110 ttataaaattttttcaaataagacggatgatcaaagttaggtgcggaaac 159
>RF01062;MIR812;AAAA02010797.1/10823-10993 39946:Oryza sativa Indica
Group
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 96/110 (87%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| ||||||||||||||||| ||||||||||| ||| ||| |||||| ||||
Sbjct: 62 cataagtcacaagtaaagtactattcatattttatcatctcataacaacaaaaatactaa 121
Query: 171 ttata-aaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||| || |||||||||| || ||||||||||||||| |||| ||||
Sbjct: 122 ttatataattttttcaaataaaacggacgatcaaagttggacgcgaaaac 171
>RF01062;MIR812;CR855103.1/43560-43731 4530:Oryza sativa (rice)
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 87/98 (88%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||| ||||||||||| ||||||| |||||||| ||||||||| ||| |||| ||||||
Sbjct: 63 cataaatcacgagtaaaatactatttatgttttaccatcttataacaacaaaattgctaa 122
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagtt 207
|||| ||||||||| ||||||||| |||||| ||||||
Sbjct: 123 ttataaaaaaattttaaataagacggacgattaaagtt 160
>RF01062;MIR812;AP008214.1/15379618-15379788 39947:Oryza sativa
Japonica Group
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 96/110 (87%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| ||||||||||||||| ||||||||||| ||| ||| |||||| ||||
Sbjct: 62 cataagtcacgcataaagtactattcatattttatcatctaataacaataaaaatactaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
| || ||||||||| ||||||||| |||||| |||||||| | |||||||
Sbjct: 122 tcataaaaaaattttaaataagacggacgattaaagttggacacggaaac 171
>RF01062;MIR812;AAAA02027066.1/8468-8298 39946:Oryza sativa Indica
Group
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 96/110 (87%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| ||| |||||||||||||||||| ||||| |||| ||| |||||||||||
Sbjct: 62 cataagtcacaagtgaagtactattcatgttttttcatcctataacaacaaaaatgctaa 121
Query: 171 ttataaaa-aatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||| ||||||||||||| | |||||||||| | |||||||||
Sbjct: 122 ttataaaattttttcaaataagacgaatgatcaaagttagacgcggaaac 171
>RF01062;MIR812;AACV01003622.1/18826-18993 39947:Oryza sativa
Japonica Group
Length = 168
Score = 99.6 bits (50), Expect = 2e-20
Identities = 87/97 (89%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttat-atcaagaaaaatgcta 169
|||||||||||||||||||||||||||||||||||||||| || | ||| |||||| ||
Sbjct: 57 cataagtcacgagtaaagtactattcatgttttatcatctcataaacaacaaaaatatta 116
Query: 170 attataaaa--aatttcaaataagacagacgatcaaa 204
||||||||| |||||||||||||||| | |||||||
Sbjct: 117 attataaaaagaatttcaaataagacaaatgatcaaa 153
>RF01062;MIR812;AP008210.1/21737711-21737871 39947:Oryza sativa
Japonica Group
Length = 161
Score = 99.6 bits (50), Expect = 2e-20
Identities = 87/98 (88%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| |||||||| ||||||||||||||||||| ||| || |||||| ||||
Sbjct: 48 cataagtcacaagtaaagtgttattcatgttttatcatctcataacagcaaaaatactaa 107
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagtt 207
|||| ||||||||||||||||||| || ||||||||||
Sbjct: 108 ttataaaaaaatttcaaataagacggatgatcaaagtt 145
>RF01062;MIR812;AAAA02011210.1/47142-47314 39946:Oryza sativa Indica
Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||
Sbjct: 64 cataagtcacgagtaaagtattattcatgttttatcatcttataataacaaaaatgctat 123
Query: 171 ttataaaaaa 180
||||||||||
Sbjct: 124 ttataaaaaa 133
>RF01062;MIR812;AACV01016893.1/6094-5925 39947:Oryza sativa Japonica
Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 87/98 (88%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||| |||||||| ||||||||||||||| | | |||||| |||
Sbjct: 61 cataagtcacgagtaaagtgctattcatattttatcatcttataactacaaaaatattaa 120
Query: 171 ttataaaaa-atttcaaataagacagacgatcaaagtt 207
||||||||| |||||||||| || |||||||||||||
Sbjct: 121 ttataaaaatttttcaaataaaacggacgatcaaagtt 158
>RF01062;MIR812;AY946455.1/29-199 4530:Oryza sativa (rice)
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 96/110 (87%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||| ||||||||||||| ||| |||||||||||| ||| ||| |||||||||||
Sbjct: 62 cataagtcaggagtaaagtactactcacgttttatcatctcataacaacaaaaatgctaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||| |||||| || ||||||||| | ||||||||||| || |||||||
Sbjct: 122 ttataaaaaaaattaaaataagacgaatgatcaaagttgagcacggaaac 171
>RF01062;MIR812;AP003735.4/57277-57448 39947:Oryza sativa Japonica
Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||| | |||||| || ||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 64 cataagtcgcaagtaaaatattattcatgttttatcatctcataacaacaaaaatactaa 123
Query: 171 ttataaaaaatttcaaataagacagacgatcaaa 204
|||||||||| ||||||||||| ||||||||||
Sbjct: 124 ttataaaaaaattcaaataagatggacgatcaaa 157
>RF01062;MIR812;AAAA02017708.1/13355-13199 39946:Oryza sativa Indica
Group
Length = 157
Score = 97.6 bits (49), Expect = 8e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
||||||||| ||||||||| ||||||||||||||||||||||| ||| |||| |||||||
Sbjct: 52 ataagtcacaagtaaagtagtattcatgttttatcatcttataacaacaaaattgctaat 111
Query: 172 tataaaaaa 180
|||||||||
Sbjct: 112 tataaaaaa 120
>RF01062;MIR812;AAAA02007477.1/25761-25598 39946:Oryza sativa Indica
Group
Length = 164
Score = 97.6 bits (49), Expect = 8e-20
Identities = 95/109 (87%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
||||||||||||||||| || ||||||||| |||||||| ||| ||| |||||| ||||
Sbjct: 56 ataagtcacgagtaaagcaccattcatgttgtatcatctcataacaataaaaatattaat 115
Query: 172 tat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
||| ||||||||| ||||||||| ||| || |||||||| |||||||||
Sbjct: 116 tataaaaaaattttaaataagacggacaattaaagttggacgcggaaac 164
>RF01062;MIR812;AACV01006765.1/6108-5948 39947:Oryza sativa Japonica
Group
Length = 161
Score = 97.6 bits (49), Expect = 8e-20
Identities = 86/97 (88%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 113 taagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatt 172
|||||||||||||||||||||||||| | |||||||||||| ||| |||||| ||||||
Sbjct: 54 taagtcacgagtaaagtactattcatatgatatcatcttataacaacaaaaatactaatt 113
Query: 173 ataaaa-aatttcaaataagacagacgatcaaagttg 208
|||||| ||||| ||||||||| ||||| |||||||
Sbjct: 114 ataaaataattttaaataagacgaacgattaaagttg 150
>RF01062;MIR812;AP008207.1/28921092-28921263 39947:Oryza sativa
Japonica Group
Length = 172
Score = 97.6 bits (49), Expect = 8e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 130 actattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaatttcaaata 189
||||||||||||||||||||| ||||||| |||||| |||||||||||||| ||||||||
Sbjct: 82 actattcatgttttatcatctaatatcaataaaaatactaattataaaaaaattcaaata 141
Query: 190 agaca 194
|||||
Sbjct: 142 agaca 146
>RF01062;MIR812;AACV01025173.1/5566-5398 39947:Oryza sativa Japonica
Group
Length = 169
Score = 97.6 bits (49), Expect = 8e-20
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaattt 183
||||||||||||||||||||||||| | ||| ||| |||||| ||||| |||||||||||
Sbjct: 73 taaagtactattcatgttttatcatttaataacaataaaaatactaatcataaaaaattt 132
Query: 184 caaataagacagacgatcaaa 204
||||||||| | |||||||||
Sbjct: 133 caaataagataaacgatcaaa 153
>RF01062;MIR812;AACV01018488.1/16663-16492 39947:Oryza sativa
Japonica Group
Length = 172
Score = 97.6 bits (49), Expect = 8e-20
Identities = 94/109 (86%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| |||||||||| ||||||||||||||||||| | || |||||| ||||
Sbjct: 64 cataagtcacgtgtaaagtacttttcatgttttatcatcttaaaaaaacaaaaatactaa 123
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| || |||||||| ||||||||| ||| ||||| ||||
Sbjct: 124 ttataaaaaaatttaaataagatgaacgatcaaaattgtgcgcgaaaac 172
>RF01062;MIR812;AP008215.1/18604387-18604219 39947:Oryza sativa
Japonica Group
Length = 169
Score = 97.6 bits (49), Expect = 8e-20
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| ||||||||||||||| |||||||||||||| ||| ||| || ||||
Sbjct: 61 cataagtcacgtataaagtactattcatactttatcatcttataacaataaagatactaa 120
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagtt 207
|||||||||| |||||||| || |||||||||||||
Sbjct: 121 ttataaaaaaaatcaaataaaacggacgatcaaagtt 157
>RF01062;MIR812;AP008218.1/20042680-20042512 39947:Oryza sativa
Japonica Group
Length = 169
Score = 97.6 bits (49), Expect = 8e-20
Identities = 94/109 (86%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||||||||||| || ||||||||| | ||| ||| ||| || ||||
Sbjct: 61 cataagtcacgagtaaagtactatttatattttatcatttcataacaacaaatatactaa 120
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||||| || |||||||| |||||| ||||||| ||||| ||||
Sbjct: 121 ttataaaaaaatttaaataagatggacgataaaagttgagcgcgaaaac 169
>RF01062;MIR812;AP008216.1/11627467-11627297 39947:Oryza sativa
Japonica Group
Length = 171
Score = 97.6 bits (49), Expect = 8e-20
Identities = 88/101 (87%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| ||||||| |||||| |||||| ||||| ||| ||| | |||| ||||
Sbjct: 63 cataagtcacgtataaagtattattcacgttttaccatctcataacaacagaaatactaa 122
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggc 211
|||||||||| || ||||||||| |||||||||||||||||
Sbjct: 123 ttataaaaaaatttaaataagacggacgatcaaagttgggc 163
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 177 aaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
||||||||||||||||| | |||||||||||| || ||||||
Sbjct: 44 aaaatttcaaataagacgggcgatcaaagttgagcacggaaa 3
>RF01062;MIR812;AACV01012162.1/3304-3133 39947:Oryza sativa Japonica
Group
Length = 172
Score = 97.6 bits (49), Expect = 8e-20
Identities = 95/109 (87%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
||||||||| | ||||||| ||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 64 ataagtcacaaataaagtattattcatgttttatcatctcatagcaacaaaaatactaaa 123
Query: 172 tataaaaa-atttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||||| |||||||||||||||| ||||||||||| || ||||||
Sbjct: 124 tataaaaatttttcaaataagacagatcatcaaagttggacgtggaaac 172
>RF01062;MIR812;AL845342.2/104516-104684 4530:Oryza sativa (rice)
Length = 169
Score = 97.6 bits (49), Expect = 8e-20
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaattt 183
|||||||||||| |||||||||||||| ||| ||| |||||| |||||||||||||| ||
Sbjct: 74 taaagtactatttatgttttatcatctcataacaacaaaaatactaattataaaaaaatt 133
Query: 184 caaataagacagacgatcaaa 204
|||||||| |||||||||||
Sbjct: 134 taaataagatagacgatcaaa 154
>RF01062;MIR812;AAAA02032780.1/1765-1595 39946:Oryza sativa Indica
Group
Length = 171
Score = 97.6 bits (49), Expect = 8e-20
Identities = 94/109 (86%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||| ||||| ||| ||||||||||||||| ||| |||||||||||
Sbjct: 63 cataagtcacgagtaaagcactatccatattttatcatcttataacaacaaaaatgctaa 122
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaac 219
|||||| ||| |||||| ||| ||||||||| |||| | |||||||
Sbjct: 123 ttataattttttttaaataaaacaaacgatcaaacttggacacggaaac 171
>RF01062;MIR812;AP004764.2/33491-33662 39947:Oryza sativa Japonica
Group
Length = 172
Score = 97.6 bits (49), Expect = 8e-20
Identities = 89/101 (88%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||| || || ||||||||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 62 cataagccatgaataaagtactattcatgttttatcatctcataacaacaaaaatactaa 121
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttggg 210
|||| |||||||||||||||| || || ||||||||||||
Sbjct: 122 ttataaaaaaatttcaaataaaacggataatcaaagttggg 162
>RF01062;MIR812;AL772427.4/92117-91947 4530:Oryza sativa (rice)
Length = 171
Score = 97.6 bits (49), Expect = 8e-20
Identities = 80/89 (89%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattat-aaaaaatt 182
|||||||||||| ||||||||||||| ||| ||| |||||| |||||||| ||||||||
Sbjct: 75 taaagtactatttgtgttttatcatctcataacaataaaaatactaattataaaaaaatt 134
Query: 183 tcaaataagacagacgatcaaagttgggc 211
| |||||||||||||||| ||||||||||
Sbjct: 135 ttaaataagacagacgattaaagttgggc 163
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggc 211
||||| |||||||||| || |||||||||||||||||
Sbjct: 45 aaaaattttcaaataaaacggacgatcaaagttgggc 9
>RF01062;MIR812;AP003871.3/137479-137311 39947:Oryza sativa Japonica
Group
Length = 169
Score = 97.6 bits (49), Expect = 8e-20
Identities = 92/105 (87%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||| ||||||||||||||||||||||||| |||| ||| ||| |||||| |||
Sbjct: 60 cataagtcatgagtaaagtactattcatgttttatgatctcataacaacaaaaatattaa 119
Query: 171 ttataaaaa-atttcaaataagacagacgatcaaagttgggcgcg 214
||||||||| ||| |||||| || ||||||||||||||| ||||
Sbjct: 120 ttataaaaagtttttaaataaaaccgacgatcaaagttggacgcg 164
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 185 aaataagacagacgatcaaagttgg 209
|||||||||||||||||||||||||
Sbjct: 35 aaataagacagacgatcaaagttgg 11
>RF01062;MIR812;AC105743.8/84786-84958 39947:Oryza sativa Japonica
Group
Length = 173
Score = 95.6 bits (48), Expect = 3e-19
Identities = 98/112 (87%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgtttt-atcatcttatatcaagaaaaatgcta 169
|||||||||| ||||||||| | |||||||||| ||||||| ||| ||| |||||| |||
Sbjct: 62 cataagtcacaagtaaagtattgttcatgtttttatcatctcataacaacaaaaatacta 121
Query: 170 attataaaaaa-tttcaaataagacagacgatcaaagttgggcgcggaaact 220
||||||||||| ||||||||||||| || | |||||||||||| | ||||||
Sbjct: 122 attataaaaaattttcaaataagacggatgttcaaagttgggcacagaaact 173
>RF01062;MIR812;AP008218.1/17839972-17840145 39947:Oryza sativa
Japonica Group
Length = 174
Score = 95.6 bits (48), Expect = 3e-19
Identities = 88/101 (87%), Gaps = 4/101 (3%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatc----aagaaaaatg 166
||||||||||||||||| |||||||||| ||||||||||| ||| | || ||||||
Sbjct: 62 cataagtcacgagtaaaatactattcatcttttatcatctcataacaacaaaaaaaaata 121
Query: 167 ctaattataaaaaatttcaaataagacagacgatcaaagtt 207
|||||||||||||||||||||||||| || ||||||||||
Sbjct: 122 ctaattataaaaaatttcaaataagatggatgatcaaagtt 162
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcg 214
||||| |||||||||| || ||||||||||||| ||||||
Sbjct: 45 aaaaactttcaaataaaacggacgatcaaagttaggcgcg 6
>RF01062;MIR812;AACV01025243.1/4967-4799 39947:Oryza sativa Japonica
Group
Length = 169
Score = 95.6 bits (48), Expect = 3e-19
Identities = 88/100 (88%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| ||||||| |||||||||||||| |||| ||| ||| |||||| ||||
Sbjct: 60 cataagtcacacataaagtattattcatgttttattatctaataacaataaaaatactaa 119
Query: 171 ttataaaaa-atttcaaataagacagacgatcaaagttgg 209
| ||||||| |||||||||||||| |||||||||||||||
Sbjct: 120 tcataaaaacatttcaaataagacggacgatcaaagttgg 159
>RF01062;MIR812;AAAA02007384.1/1216-1047 39946:Oryza sativa Indica
Group
Length = 170
Score = 95.6 bits (48), Expect = 3e-19
Identities = 85/96 (88%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
|||||||| ||||||| ||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 64 ataagtcatgagtaaaacactattcatgttttatcatctcataacaacaaaaatattaat 123
Query: 172 tataaaaaatttcaaataagacagacgatcaaagtt 207
||||||||| || ||||||||| |||||||||||||
Sbjct: 124 tataaaaaaatt-aaataagacggacgatcaaagtt 158
>RF01062;MIR812;AP008214.1/25418777-25418947 39947:Oryza sativa
Japonica Group
Length = 171
Score = 95.6 bits (48), Expect = 3e-19
Identities = 88/100 (88%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 113 taagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatt 172
||||||||| ||||||||||||||| |||||||||| ||| ||| |||||||| ||||
Sbjct: 64 taagtcacgtataaagtactattcatattttatcatcccataacaataaaaatgcaaatt 123
Query: 173 at-aaaaaatttcaaataagacagacgatcaaagttgggc 211
|| |||||| |||||||||||| |||||| ||||||||||
Sbjct: 124 ataaaaaaaattcaaataagacggacgattaaagttgggc 163
>RF01062;MIR812;AP008208.1/2764819-2764990 39947:Oryza sativa
Japonica Group
Length = 172
Score = 95.6 bits (48), Expect = 3e-19
Identities = 97/111 (87%), Gaps = 3/111 (2%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||||||||||||||||| ||||||||||||||| ||| ||| |||||| |||
Sbjct: 63 cataagtcacgagtaaagtactatccatgttttatcatctcataacaataaaaatattaa 122
Query: 171 ttataaaaa--atttcaaataagacagacgatcaaagttgggcgcggaaac 219
||||||||| ||| |||||||||| |||| ||||||||| |||| ||||
Sbjct: 123 ttataaaaatttttttaaataagaca-acgaacaaagttggacgcgaaaac 172
>RF01062;MIR812;AP008208.1/31187520-31187351 39947:Oryza sativa
Japonica Group
Length = 170
Score = 95.6 bits (48), Expect = 3e-19
Identities = 94/108 (87%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||||||||| ||||||| ||||||||||||| ||| ||| |||||| |||
Sbjct: 63 cataagtcacgagtaaaacactattcgtgttttatcatctcataacaacaaaaatattaa 122
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
|||||||||| || ||||||||| | ||||||||||||| | ||||||
Sbjct: 123 ttataaaaaaatt-aaataagacgggcgatcaaagttggacacggaaa 169
>RF01062;MIR812;AP008216.1/13315098-13314928 39947:Oryza sativa
Japonica Group
Length = 171
Score = 95.6 bits (48), Expect = 3e-19
Identities = 85/96 (88%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattat-aaaaaatt 182
|||| |||||||||||||||||||||| ||| || |||||| |||||||| |||||| |
Sbjct: 75 taaattactattcatgttttatcatctcataataataaaaatactaattataaaaaaaat 134
Query: 183 tcaaataagacagacgatcaaagttgggcgcggaaa 218
| |||||||||||| ||||||||||||||| |||||
Sbjct: 135 taaaataagacagatgatcaaagttgggcgtggaaa 170
>RF01062;MIR812;AAAA02025560.1/18144-18312 39946:Oryza sativa Indica
Group
Length = 169
Score = 93.7 bits (47), Expect = 1e-18
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 119 acgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaa 178
||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||
Sbjct: 70 acgagtaaaatactattcatgttttatcatctcataacaa-caaaatgctaattataaaa 128
Query: 179 aatttcaaataagac 193
| |||||||||||||
Sbjct: 129 agtttcaaataagac 143
