miRNEST 2.0, an integrative microRNA resource :: BLAST
>41640_vvi-MIR390:mirbase
Length = 140
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 agaatctgttaaactcaggagggatagcgcca 43
|||||||||||| |||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcca 32
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 67 tggcgctatctatccagagtttcacggcttcttc 100
||||||||||||||| ||||||||||| ||||||
Sbjct: 107 tggcgctatctatcctgagtttcacgggttcttc 140
>41413_ptc-MIR390a:mirbase
Length = 119
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 agaatctgttaaactcaggagggatagcgcca 43
|||||||||||| |||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcca 32
>41237_csi-MIR390:mirbase
Length = 154
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 agaatctgttaaactcaggagggatagcgcca 43
|||||||||||| |||||||||||||||||||
Sbjct: 11 agaatctgttaagctcaggagggatagcgcca 42
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 67 tggcgctatctatccagagtttcacggcttcttcttact 105
|||||||||| |||| |||||||| ||||||||||||||
Sbjct: 96 tggcgctatccatcctgagtttcatggcttcttcttact 134
>41053_ghr-MIR390c:mirbase
Length = 114
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 agaatctgttaaactcaggagggatagcgcca 43
|||||||||||| |||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcca 32
>41052_ghr-MIR390b:mirbase
Length = 132
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 agaatctgttaaactcaggagggatagcgcca 43
|||||||||||| |||||||||||||||||||
Sbjct: 8 agaatctgttaagctcaggagggatagcgcca 39
>41051_ghr-MIR390a:mirbase
Length = 124
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 agaatctgttaaactcaggagggatagcgcca 43
|||||||||||| |||||||||||||||||||
Sbjct: 5 agaatctgttaagctcaggagggatagcgcca 36
>41416_ptc-MIR390d:mirbase
Length = 106
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 agaatctgttaaactcaggagggatagcgcc 42
|||||||||||| ||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
>41414_ptc-MIR390b:mirbase
Length = 106
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 agaatctgttaaactcaggagggatagcgcc 42
|||||||||||| ||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
>41415_ptc-MIR390c:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 15 atctgttaaactcaggagggatagcgcca 43
||||||||| |||||||||||||||||||
Sbjct: 4 atctgttaagctcaggagggatagcgcca 32
>41131_tcc-MIR390b:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 12 agaatctgttaaactcaggagggatagcgcca 43
||||||||| || |||||||||||||||||||
Sbjct: 11 agaatctgtaaagctcaggagggatagcgcca 42
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 67 tggcgctatctatccagagtttcacggcttcttc 100
||||||||||||||| |||||||| || ||||||
Sbjct: 77 tggcgctatctatcctgagtttcatgggttcttc 110
>40468_gma-MIR390a:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 12 agaatctgttaaactcaggagggatagcgcca 43
||||||||| || |||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgcca 32
>40467_gma-MIR390a:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 12 agaatctgttaaactcaggagggatagcgcca 43
||||||||| || |||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgcca 32
>40293_bna-MIR390b:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 12 agaatctgttaaactcaggagggatagcgcca 43
||||||||| || |||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgcca 39
>40072_ath-MIR390a:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 12 agaatctgttaaactcaggagggatagcgcca 43
||||||||| || |||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgcca 39
>39862_aly-MIR390a:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 12 agaatctgttaaactcaggagggatagcgcca 43
||||||||| || |||||||||||||||||||
Sbjct: 19 agaatctgtaaagctcaggagggatagcgcca 50
>41130_tcc-MIR390a:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 17 ctgttaaactcaggagggatagcgcca 43
||||||| |||||||||||||||||||
Sbjct: 16 ctgttaagctcaggagggatagcgcca 42
>40705_mtr-MIR390:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 17 ctgttaaactcaggagggatagcgcca 43
||||||| |||||||||||||||||||
Sbjct: 1 ctgttaagctcaggagggatagcgcca 27
>40371_rco-MIR390a:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 ctgttaaactcaggagggatagcgcc 42
||||||| ||||||||||||||||||
Sbjct: 1 ctgttaagctcaggagggatagcgcc 26
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 17 ctgttaaactcaggagggatagcgccac 44
|||| |||||||||| ||||||||||||
Sbjct: 106 ctgtgaaactcaggatggatagcgccac 79
>40294_bna-MIR390c:mirbase
Length = 128
Score = 42.1 bits (21), Expect = 8e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 67 tggcgctatctatccagagtttcacggcttcttcttacttt 107
|||||||||| |||| ||||| || ||||||||||| ||||
Sbjct: 83 tggcgctatccatcctgagttccatggcttcttcttgcttt 123
>40469_gma-MIR390b:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 12 agaatctgttaaactcaggagggatagc 39
||||||||| || |||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagc 28
>40292_bna-MIR390a:mirbase
Length = 144
Score = 40.1 bits (20), Expect = 3e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 64 tattggcgctatctatccagagtttcacggcttcttcttacttt 107
||||||||||||| |||| ||||| | ||||||||||| ||||
Sbjct: 90 tattggcgctatccatcctgagttctatggcttcttcttgcttt 133
