miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01059;mir-598;AF462556.1/130-3 156983:Hemibagrus nemurus (Asian
redtail catfish)
Length = 128
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 33 atcatcgtcaccatcatcatcat 55
|||||||||||||||||||||||
Sbjct: 31 atcatcgtcaccatcatcatcat 9
>RF01059;mir-598;AASC02037699.1/899-831 6500:Aplysia californica
(California sea hare)
Length = 69
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 33 atcatcgtcaccatcatcatca 54
||||||||||||||||||||||
Sbjct: 22 atcatcgtcaccatcatcatca 1
>RF01059;mir-598;AACZ02231200.1/1717-1622 9598:Pan troglodytes
(chimpanzee)
Length = 96
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 gtgatcatcgtcaccatcatcatcat 55
||||||||| ||||||||||||||||
Sbjct: 42 gtgatcatcatcaccatcatcatcat 67
>RF01059;mir-598;ABRM01073145.1/3366-3476 6085:Hydra
magnipapillata
Length = 111
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 33 atcatcgtcaccatcatcatc 53
|||||||||||||||||||||
Sbjct: 91 atcatcgtcaccatcatcatc 71
>RF01059;mir-598;ABRM01070298.1/2422-2517 6085:Hydra
magnipapillata
Length = 96
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 31 tgatcatcgtcaccatcatcatcat 55
|||||||| ||||||||||||||||
Sbjct: 60 tgatcatcatcaccatcatcatcat 36
>RF01059;mir-598;AAQB01006341.1/4699-4637 7260:Drosophila
willistoni
Length = 63
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 31 tgatcatcgtcaccatcatcatcat 55
|||||||||||| ||||||||||||
Sbjct: 39 tgatcatcgtcatcatcatcatcat 15
>RF01059;mir-598;AC171141.2/74913-74999 6412:Helobdella robusta
Length = 87
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 31 tgatcatcgtcaccatcatcatcat 55
|||||||| ||||||||||||||||
Sbjct: 51 tgatcatcatcaccatcatcatcat 27
