miRNEST 2.0, an integrative microRNA resource :: BLAST
>51603_ptc-miR159b:pmrd
Length = 187
Score = 297 bits (150), Expect = 2e-81
Identities = 176/187 (94%)
Strand = Plus / Plus
Query: 12 gattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 60
Query: 72 tgagctatgaatcccacagccctatcaccatctgttattttgacgggcctgcggcttgca 131
|||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 61 tgagctatgaatcccacagccctatcaccatcagtcattttgatgggcctgcggcttgca 120
Query: 132 tatctcaggagctttattacctaatgttggatcnnnnnnnggattgaagggagctctaaa 191
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 121 tatctcaggagctttattacctaatgttagatctttttttggattgaagggagctctaaa 180
Query: 192 cctttga 198
|||||||
Sbjct: 181 cctttga 187
>54777_vvi-miR159c:pmrd
Length = 190
Score = 97.6 bits (49), Expect = 3e-21
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 17 tggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagc 76
||||||||||||||||||||||||||||| | || | |||||||||| ||||||||||
Sbjct: 4 tggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgact 63
Query: 77 tatgaatcccacagccctatc 97
|||| ||||||||||||||||
Sbjct: 64 tatggatcccacagccctatc 84
>51602_ptc-miR159a:pmrd
Length = 183
Score = 97.6 bits (49), Expect = 3e-21
Identities = 150/183 (81%), Gaps = 6/183 (3%)
Strand = Plus / Plus
Query: 12 gattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 71
||||| |||||||||||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 1 gattagggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgc 60
Query: 72 tgagctatgaatcccacagccctatc-accatctgttattttgacgggcctgcggcttgc 130
| ||||||| |||| |||| |||||| | || ||| || || ||||||||||
Sbjct: 61 taagctatggatcc-acagtcctatctatcaactgaag----gataggtttgcggcttgc 115
Query: 131 atatctcaggagctttattacctaatgttggatcnnnnnnnggattgaagggagctctaa 190
||||||||||||||||||| ||||||||| |||| |||||||||||||||||||
Sbjct: 116 atatctcaggagctttattgcctaatgttagatccctttttggattgaagggagctctaa 175
Query: 191 acc 193
|||
Sbjct: 176 acc 178
>51604_ptc-miR159c:pmrd
Length = 183
Score = 89.7 bits (45), Expect = 8e-19
Identities = 149/183 (81%), Gaps = 6/183 (3%)
Strand = Plus / Plus
Query: 12 gattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 71
||||| |||||||||||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 1 gattagggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgc 60
Query: 72 tgagctatgaatcccacagccctatc-accatctgttattttgacgggcctgcggcttgc 130
| ||||||| |||| |||| |||||| | || | | || || ||||||||||
Sbjct: 61 taagctatggatcc-acagtcctatctatcaaccgaag----gataggtttgcggcttgc 115
Query: 131 atatctcaggagctttattacctaatgttggatcnnnnnnnggattgaagggagctctaa 190
||||||||||||||||||| ||||||||| |||| |||||||||||||||||||
Sbjct: 116 atatctcaggagctttattgcctaatgttagatccctttttggattgaagggagctctaa 175
Query: 191 acc 193
|||
Sbjct: 176 acc 178
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 87.7 bits (44), Expect = 3e-18
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 121 tgcggcttgcatatctcaggagctttattacctaatgttggatcnnnnnnnggattgaag 180
||||||||||||||||||||||||||||| ||||||||| |||| |||||||||
Sbjct: 101 tgcggcttgcatatctcaggagctttattgcctaatgttagatccctttttggattgaag 160
Query: 181 ggagctctaaacc 193
|||||||||||||
Sbjct: 161 ggagctctaaacc 173
>48539_gma-miR159a:pmrd
Length = 214
Score = 71.9 bits (36), Expect = 2e-13
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 11 ggattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctg 70
|||||||| ||||||||||||||||||||||| || | || | |||||| || ||||||
Sbjct: 10 ggattatgaagtggagctccttgaagtccaattgaggatcttactgggtgaattgagctg 69
Query: 71 ctgagctatgaatcccacag 90
|| ||||||| |||||||||
Sbjct: 70 cttagctatggatcccacag 89
>54378_pvu-miR159:pmrd
Length = 174
Score = 67.9 bits (34), Expect = 3e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatg 80
|||||||||||||||||||||| || | || | |||||| ||| |||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 aatcccacag 90
|||||||||
Sbjct: 61 gatcccacag 70
>54377_pvu-miR159:pmrd
Length = 174
Score = 67.9 bits (34), Expect = 3e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatg 80
|||||||||||||||||||||| || | || | |||||| ||| |||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 aatcccacag 90
|||||||||
Sbjct: 61 gatcccacag 70
>46931_ath-miR159a:pmrd
Length = 184
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 127 ttgcatatctcaggagcttta 147
|||||||||||||||||||||
Sbjct: 114 ttgcatatctcaggagcttta 134
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 tggagctccttgaagtccaa 41
||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaa 20
>48395_bra-miR159a:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 124 ggcttgcatatctcaggagcttta 147
||||| ||||||||||||||||||
Sbjct: 111 ggcttacatatctcaggagcttta 134
>48339_bna-miR159:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 124 ggcttgcatatctcaggagcttta 147
||||| ||||||||||||||||||
Sbjct: 109 ggcttacatatctcaggagcttta 132
