miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42653_tae-MIR1120:mirbase
          Length = 119

 Score = 85.7 bits (43), Expect = 6e-18
 Identities = 75/85 (88%), Gaps = 3/85 (3%)
 Strand = Plus / Minus

                                                                      
Query: 13 tactccctccgtctcaaaatataagagcgtttttggcactacactagtgtaaaaaatgct 72
          |||||||||||||||| |||||||||  ||||||| ||||||||   ||| ||||||| |
Sbjct: 99 tactccctccgtctcataatataagaatgtttttgacactacac---tgtcaaaaatgtt 43

                                   
Query: 73 cttatattttgggacggagggagta 97
          |||||||| ||||||||||||||||
Sbjct: 42 cttatattatgggacggagggagta 18




>41895_hvu-MIR1120:mirbase
          Length = 84

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                      
Query: 31 atataagagcgtttttggcactacactagtgtaaaaaatgctcttatattttgggacgga 90
          ||||||||| ||||||   ||||||||||||| |||||   ||||||||| |||||||||
Sbjct: 19 atataagagtgtttttaatactacactagtgtgaaaaacattcttatattatgggacgga 78

            
Query: 91 gg 92
          ||
Sbjct: 79 gg 80




>42483_ssp-MIR1128:mirbase
          Length = 275

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 79  ttttgggacggagggagtatgtttgt 104
           |||||||||||||| |||||||||||
Sbjct: 248 ttttgggacggaggtagtatgtttgt 273




>42275_osa-MIR1862e:mirbase
          Length = 93

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 77 tattttgggacggagggagtat 98
          ||||||||||||||||||||||
Sbjct: 71 tattttgggacggagggagtat 92




>42274_osa-MIR1862d:mirbase
          Length = 150

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 77  tattttgggacggagggagtat 98
           ||||||||||||||||||||||
Sbjct: 102 tattttgggacggagggagtat 123




>42271_osa-MIR1862a:mirbase
          Length = 88

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 77 tattttgggacggagggagtat 98
          ||||||||||||||||||||||
Sbjct: 67 tattttgggacggagggagtat 88