miRNEST 2.0, an integrative microRNA resource :: BLAST
>41897_hvu-MIR1436:mirbase
Length = 91
Score = 60.0 bits (30), Expect = 3e-10
Identities = 50/56 (89%), Gaps = 3/56 (5%)
Strand = Plus / Minus
Query: 13 aatgtactccctccgtcccataatg---tagtgtcaaaaaacgtcttacattatgg 65
||||||||||||||||||||||||| |||||||||||| ||| ||||||||||
Sbjct: 90 aatgtactccctccgtcccataatgtagtagtgtcaaaaaccgtactacattatgg 35
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tacattatgggacggagggagta 78
|||||||||||||||||||||||
Sbjct: 64 tacattatgggacggagggagta 86
>42663_tae-MIR1130:mirbase
Length = 122
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 46 aaaaacgtcttacattatgggacggagggagtata 80
||||||||||||||||| | |||||||||||||||
Sbjct: 43 aaaaacgtcttacattacgagacggagggagtata 9
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 46 aaaaacgtcttacattatgggacggag 72
|||||||||||||||||||||||||||
Sbjct: 79 aaaaacgtcttacattatgggacggag 105
>42653_tae-MIR1120:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 36 tgtagtgtcaaaaaacgtcttacattatgggacggagggagtat 79
|||||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 57 tgtagtgtcaaaaacattcttatattatgagacggagggagtat 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 tcttacattatgggacggagggagta 78
||||| ||||||||||||||||||||
Sbjct: 43 tcttatattatgggacggagggagta 18
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 gtactccctccgtcccataat 36
|||||||||||||||||||||
Sbjct: 17 gtactccctccgtcccataat 37
>42219_osa-MIR1436:mirbase
Length = 161
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccataatgt 38
||||||||||||||||||||||
Sbjct: 142 tactccctccgtcccataatgt 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 acattatgggacggagggagta 78
||||||||||||||||||||||
Sbjct: 121 acattatgggacggagggagta 142
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 59 attatgggacggagggagta 78
||||||||||||||||||||
Sbjct: 31 attatgggacggagggagta 12
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccataat 36
||||||||||||||||||||
Sbjct: 12 tactccctccgtcccataat 31
>42167_osa-MIR818d:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 54 cttacattatgggacggagggagta 78
|||| ||||||||||||||||||||
Sbjct: 103 cttatattatgggacggagggagta 127
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 16 gtactccctccgtcccataat 36
|||||||||||||||||||||
Sbjct: 128 gtactccctccgtcccataat 108
