miRNEST 2.0, an integrative microRNA resource :: BLAST
>46150_miR1130:micropc
Length = 75
Score = 149 bits (75), Expect = 4e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 12 cctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtcttac 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtcttac 60
Query: 72 gttatgggacagagg 86
|||||||||||||||
Sbjct: 61 gttatgggacagagg 75
>46658_miR1436:micropc
Length = 79
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 10 tccctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtctt 69
|||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||
Sbjct: 1 tccctccgtcccgtaatgtaagacgttttttgacactacaatagagtcaaaaaacgtctt 60
Query: 70 acgttatgggacagaggg 87
|| ||||||||| |||||
Sbjct: 61 acattatgggacggaggg 78
Score = 75.8 bits (38), Expect = 5e-15
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 10 tccctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtctt 69
|||||||||||||||||||||||| ||||||||| || ||| |||||||||||||||
Sbjct: 79 tccctccgtcccataatgtaagacgttttttgactctattgtagtgtcaaaaaacgtctt 20
Query: 70 acgttatgggacagaggg 87
|| ||| ||||| |||||
Sbjct: 19 acattacgggacggaggg 2
>46077_miR1130:micropc
Length = 75
Score = 101 bits (51), Expect = 9e-23
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 12 cctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtcttac 71
|||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||
Sbjct: 1 cctccgtcccgtaatgtaagacgttttttgacactacaatagagtcaaaaaacgtcttac 60
Query: 72 gttatgggacagagg 86
||||||||| ||||
Sbjct: 61 attatgggacggagg 75
Score = 69.9 bits (35), Expect = 3e-13
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 12 cctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtcttac 71
|||||||||||||||||||||| ||||||||| || ||| |||||||||||||||||
Sbjct: 75 cctccgtcccataatgtaagacgttttttgactctattgtagtgtcaaaaaacgtcttac 16
Query: 72 gttatgggacagagg 86
||| ||||| ||||
Sbjct: 15 attacgggacggagg 1
>45479_miR1436:micropc
Length = 83
Score = 87.7 bits (44), Expect = 1e-18
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtc 67
||||||| ||||||||||||||||| |||||||||| ||||||| ||||| |||| |||
Sbjct: 83 actcccttcgtcccataatgtaagatgttttttgacactacactacagtcagaaaatgtc 24
Query: 68 ttacgttatgggacagaggg 87
|||| ||| |||||||||||
Sbjct: 23 ttacattacgggacagaggg 4
Score = 60.0 bits (30), Expect = 3e-10
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 8 actccctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtc 67
|||||||| ||||| |||||||||||||||| |||| || ||| |||||||||| ||
Sbjct: 1 actccctctgtcccgtaatgtaagacattttctgactgtagtgtagtgtcaaaaaacatc 60
Query: 68 ttacgttatgggac 81
|||| |||||||||
Sbjct: 61 ttacattatgggac 74
>46187_miR1132:micropc
Length = 82
Score = 81.8 bits (41), Expect = 8e-17
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 9 ctccctccgtcccataatgtaagacattttttgaca-ttacactagagtcaaaaaacgtc 67
||||||||||||||||||||||||| |||||| ||| |||||||| |||||| ||||||
Sbjct: 1 ctccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaacgtc 60
Query: 68 ttacgttatgggacagaggg 87
|||| |||||| || |||||
Sbjct: 61 ttacattatggaacggaggg 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 9 ctccctccgtcccataatgtaagacattttttgacattacacta-gagtcaaaaaacgtc 67
|||||||||| |||||||||||||| || ||||||| || || | || ||||||||||
Sbjct: 82 ctccctccgttccataatgtaagacgttntttgacactagtgtacgtgtgaaaaaacgtc 23
Query: 68 ttacgttatgggacagaggg 87
|||| ||||||||| |||||
Sbjct: 22 ttacattatgggacggaggg 3
>46428_miR1436:micropc
Length = 69
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaagacattttttg 41
|||||||||||||||||||||||||| |||||||
Sbjct: 69 actccctccgtcccataatgtaagacgttttttg 36
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 8 actccctccgtcccataatgtaagacattttttgaca 44
||||||||||| |||||||||||||| ||||||||||
Sbjct: 1 actccctccgttccataatgtaagacgttttttgaca 37
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 57 caaaaaacgtcttacgttatgggacagaggg 87
||||||||||||||| ||||||||| |||||
Sbjct: 36 caaaaaacgtcttacattatgggacggaggg 66
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 55 gtcaaaaaacgtcttacgttatgggacagaggg 87
||||||||||||||||| |||||| || |||||
Sbjct: 36 gtcaaaaaacgtcttacattatggaacggaggg 4
>46264_miR1436:micropc
Length = 69
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaagacattttttg 41
|||||||||||||||||||||||||| |||||||
Sbjct: 69 actccctccgtcccataatgtaagacgttttttg 36
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 8 actccctccgtcccataatgtaagacattttttgaca 44
||||||||||| |||||||||||||| ||||||||||
Sbjct: 1 actccctccgttccataatgtaagacgttttttgaca 37
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 57 caaaaaacgtcttacgttatgggacagaggg 87
||||||||||||||| ||||||||| |||||
Sbjct: 36 caaaaaacgtcttacattatgggacggaggg 66
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 55 gtcaaaaaacgtcttacgttatgggacagaggg 87
||||||||||||||||| |||||| || |||||
Sbjct: 36 gtcaaaaaacgtcttacattatggaacggaggg 4
>45393_miR1436:micropc
Length = 69
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaagacattttttg 41
|||||||||||||||||||||||||| |||||||
Sbjct: 69 actccctccgtcccataatgtaagacgttttttg 36
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 8 actccctccgtcccataatgtaagacattttttgaca 44
||||||||||| |||||||||||||| ||||||||||
Sbjct: 1 actccctccgttccataatgtaagacgttttttgaca 37
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 57 caaaaaacgtcttacgttatgggacagaggg 87
||||||||||||||| ||||||||| |||||
Sbjct: 36 caaaaaacgtcttacattatgggacggaggg 66
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 55 gtcaaaaaacgtcttacgttatgggacagaggg 87
||||||||||||||||| |||||| || |||||
Sbjct: 36 gtcaaaaaacgtcttacattatggaacggaggg 4
>45005_miR1436:micropc
Length = 69
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaagacattttttg 41
|||||||||||||||||||||||||| |||||||
Sbjct: 69 actccctccgtcccataatgtaagacgttttttg 36
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 8 actccctccgtcccataatgtaagacattttttgaca 44
||||||||||| |||||||||||||| ||||||||||
Sbjct: 1 actccctccgttccataatgtaagacgttttttgaca 37
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 57 caaaaaacgtcttacgttatgggacagaggg 87
||||||||||||||| ||||||||| |||||
Sbjct: 36 caaaaaacgtcttacattatgggacggaggg 66
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 55 gtcaaaaaacgtcttacgttatgggacagaggg 87
||||||||||||||||| |||||| || |||||
Sbjct: 36 gtcaaaaaacgtcttacattatggaacggaggg 4
>44928_miR1436:micropc
Length = 69
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaagacattttttg 41
|||||||||||||||||||||||||| |||||||
Sbjct: 69 actccctccgtcccataatgtaagacgttttttg 36
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 8 actccctccgtcccataatgtaagacattttttgaca 44
||||||||||| |||||||||||||| ||||||||||
Sbjct: 1 actccctccgttccataatgtaagacgttttttgaca 37
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 57 caaaaaacgtcttacgttatgggacagaggg 87
||||||||||||||| ||||||||| |||||
Sbjct: 36 caaaaaacgtcttacattatgggacggaggg 66
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 55 gtcaaaaaacgtcttacgttatgggacagaggg 87
||||||||||||||||| |||||| || |||||
Sbjct: 36 gtcaaaaaacgtcttacattatggaacggaggg 4
>46467_miR1130:micropc
Length = 56
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 cctccgtcccataatgtaagacattttttgaca 44
|||||||| ||||||||||||| ||||||||||
Sbjct: 1 cctccgtctcataatgtaagacgttttttgaca 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 55 gtcaaaaaacgtcttacgttatgggacagagg 86
||||||||||||||||| ||||| ||| ||||
Sbjct: 32 gtcaaaaaacgtcttacattatgagacggagg 1
>45448_miR1436:micropc
Length = 64
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 cctccgtcccataatgtaagacattttttgaca 44
|||||||| ||||||||||||| ||||||||||
Sbjct: 5 cctccgtctcataatgtaagacgttttttgaca 37
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 55 gtcaaaaaacgtcttacgttatgggacagagg 86
||||||||||||||||| ||||| ||| ||||
Sbjct: 36 gtcaaaaaacgtcttacattatgagacggagg 5
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaag 31
|||||||| |||||||||||||||
Sbjct: 64 actccctctgtcccataatgtaag 41
>45044_miR1130:micropc
Length = 56
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 cctccgtcccataatgtaagacattttttgaca 44
|||||||| ||||||||||||| ||||||||||
Sbjct: 1 cctccgtctcataatgtaagacgttttttgaca 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 55 gtcaaaaaacgtcttacgttatgggacagagg 86
||||||||||||||||| ||||| ||| ||||
Sbjct: 32 gtcaaaaaacgtcttacattatgagacggagg 1
>46744_miR1436:micropc
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 83 actccctccgtcccataatataaga 59
>46560_miR1436:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 80 actccctccgtcccataatataaga 56
>46416_miR1436:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 80 actccctccgtcccataatataaga 56
>46351_miR1436:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 80 actccctccgtcccataatataaga 56
>46296_miR1436:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 80 actccctccgtcccataatataaga 56
>46280_miR1436:micropc
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtc 67
|||||||||||| |||||| ||| | | ||||||||| |||| || || ||||||||||
Sbjct: 97 actccctccgtctcataatataaaatactttttgacactacatcagtgttaaaaaacgtc 38
Query: 68 t 68
|
Sbjct: 37 t 37
>46229_miR1436:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 80 actccctccgtcccataatataaga 56
>46082_miR1436:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 80 actccctccgtcccataatataaga 56
>45853_miR1436:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 80 actccctccgtcccataatataaga 56
>45812_miR1436:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 80 actccctccgtcccataatataaga 56
>45616_miR1436:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 80 actccctccgtcccataatataaga 56
>45608_miR1436:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 80 actccctccgtcccataatataaga 56
>45459_miR1436:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 80 actccctccgtcccataatataaga 56
>45450_miR1436:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 80 actccctccgtcccataatataaga 56
>45382_miR1436:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 80 actccctccgtcccataatataaga 56
>45219_miR1436:micropc
Length = 54
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 8 actccctccgtcccataatgtaagacatttttt 40
||||||||||||| | |||||||||| ||||||
Sbjct: 1 actccctccgtcctaaaatgtaagacgtttttt 33
>45149_miR1436:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 80 actccctccgtcccataatataaga 56
>44955_miR1436:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaaga 32
||||||||||||||||||| |||||
Sbjct: 80 actccctccgtcccataatataaga 56
>46836_miR1439:micropc
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 33/36 (91%), Gaps = 1/36 (2%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccataatgtaaga-catttttt 40
||||||||||||||||| ||| ||||| ||||||||
Sbjct: 86 atactccctccgtcccaaaatataagagcatttttt 51
>46683_miR1436:micropc
Length = 60
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 8 actccctccgtcccataatgtaag 31
||||||||||||||||||| ||||
Sbjct: 60 actccctccgtcccataatataag 37
