miRNEST 2.0, an integrative microRNA resource :: BLAST
>54696_tae-miR1121:pmrd
Length = 98
Score = 85.7 bits (43), Expect = 7e-18
Identities = 78/89 (87%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 18 gtactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaa 77
||||||||||||||||||||||| | || ||||| ||||||| |||||||||||||||
Sbjct: 8 gtactccctctgtaaagaaatattagagtgttta---gatcacttaagtagtgatctaaa 64
Query: 78 tgttcttatatttctttacagaaggagta 106
| |||||||||||||||| || ||||||
Sbjct: 65 cgctcttatatttctttacggagggagta 93
Score = 54.0 bits (27), Expect = 2e-08
Identities = 74/89 (83%), Gaps = 3/89 (3%)
Strand = Plus / Minus
Query: 18 gtactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaa 77
|||||||||| |||||||||||||| ||||| |||||||||| |||||||||||
Sbjct: 94 gtactccctccgtaaagaaatataagagcgt---ttagatcactacttaagtgatctaaa 38
Query: 78 tgttcttatatttctttacagaaggagta 106
||| ||||||||||||||| ||||||
Sbjct: 37 cactctaatatttctttacagagggagta 9
>48304_ave-miR1120:pmrd
Length = 85
Score = 69.9 bits (35), Expect = 4e-13
Identities = 75/88 (85%), Gaps = 9/88 (10%)
Strand = Plus / Minus
Query: 19 tactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaat 78
|||||||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 82 tactccctctgtaaagaaatataagagcgttta---gatca------tagtgatctaaac 32
Query: 79 gttcttatatttctttacagaaggagta 106
| ||||||||||||||||||| ||||||
Sbjct: 31 gctcttatatttctttacagagggagta 4
Score = 63.9 bits (32), Expect = 3e-11
Identities = 75/89 (84%), Gaps = 9/89 (10%)
Strand = Plus / Plus
Query: 18 gtactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaa 77
||||||||||||||||||||||||| ||||| |||||||||| |||||||||
Sbjct: 3 gtactccctctgtaaagaaatataagagcgt---ttagatcact------atgatctaaa 53
Query: 78 tgttcttatatttctttacagaaggagta 106
| ||||||||||||||||||| ||||||
Sbjct: 54 cgctcttatatttctttacagagggagta 82
>54756_tmo-miR1120:pmrd
Length = 85
Score = 61.9 bits (31), Expect = 1e-10
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 52 ttagatcactgaagtagtgatctaaatgttcttatatttctttacagaaggagta 106
|||||||||| ||||||||||||||| | ||||||||| |||||||| ||||||
Sbjct: 31 ttagatcactaaagtagtgatctaaaaggtcttatattagtttacagagggagta 85
>54753_tae-miR2033b:pmrd
Length = 72
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 66 tagtgatctaaatgttcttatatttctttacagaaggagta 106
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 32 tagtgatctaaacactcttatatttctttacagaaggagta 72
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 19 tactccctctgtaaagaaatataaaagcgttta 51
|||||| ||||||||||||||||| || |||||
Sbjct: 72 tactccttctgtaaagaaatataagagtgttta 40
>54761_tur-miR1120:pmrd
Length = 84
Score = 54.0 bits (27), Expect = 2e-08
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 52 ttagatcactgaagtagtgatctaaatgttcttatatttctttacagaaggagta 106
|||||||||| ||||||||||||||| | ||||||||| |||||||| ||||||
Sbjct: 31 ttagatcact-aagtagtgatctaaaaggtcttatattagtttacagagggagta 84
>54752_tae-miR2033a:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 19 tactccctctgtaaagaaatat 40
||||||||||||||||||||||
Sbjct: 96 tactccctctgtaaagaaatat 75
