miRNEST 2.0, an integrative microRNA resource :: BLAST
>40337_rco-MIR156h:mirbase
Length = 97
Score = 129 bits (65), Expect = 8e-31
Identities = 88/94 (93%), Gaps = 5/94 (5%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgatgatgtgcaatt--tttggattctgcatctcac 105
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 6 ttgacagaagatagagagcacagatgatgatgtgcaatgacttt---ttctgcatctcac 62
Query: 106 tcctttgtgctctctatgcttctgtcatcacctt 139
||||||||||||||||||||||||||||||||||
Sbjct: 63 tcctttgtgctctctatgcttctgtcatcacctt 96
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 119 bits (60), Expect = 8e-28
Identities = 82/89 (92%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactc 107
||||||||||||||||||||||||||||||| |||||| ||| |||||||| |||||
Sbjct: 11 ttgacagaagatagagagcacagatgatgatatgcaat----ggactctgcatcccactc 66
Query: 108 ctttgtgctctctatgcttctgtcatcac 136
|||||||||||||||||||||||||||||
Sbjct: 67 ctttgtgctctctatgcttctgtcatcac 95
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 109 bits (55), Expect = 7e-25
Identities = 82/91 (90%), Gaps = 5/91 (5%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactc 107
|||||||||||||||||||||||||||||||||||| |||| | ||||||||||||
Sbjct: 11 ttgacagaagatagagagcacagatgatgatgtgca-----tggagtttgcatctcactc 65
Query: 108 ctttgtgctctctatgcttctgtcatcacct 138
|||||||||||||| |||||||||||||||
Sbjct: 66 ctttgtgctctctagacttctgtcatcacct 96
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 103 bits (52), Expect = 4e-23
Identities = 78/86 (90%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 49 tgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactcc 108
|||||||||||||||||||||||||||||| |||| | || |||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatgatatgca---tggagagtctgcatctcactcc 57
Query: 109 tttgtgctctctatgcttctgtcatc 134
||||||||||||||||||||||||||
Sbjct: 58 tttgtgctctctatgcttctgtcatc 83
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 99.6 bits (50), Expect = 7e-22
Identities = 99/114 (86%), Gaps = 6/114 (5%)
Strand = Plus / Plus
Query: 27 aggaggcactgctgatgctgtttgacagaagatagagagcacagatgatgatgtgcaatt 86
|||||| |||| ||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct: 1 aggaggaactggtgatgttgtt-gacagaagatagagagcacagatgatgagatgca--- 56
Query: 87 tttggattctgcatctcactcctttgtgctctctatgcttctgtcatcaccttt 140
|||| |||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 57 --tggagcctgcatttcactcctttgtgctctctattcttctgtcatcaccttt 108
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 95.6 bits (48), Expect = 1e-20
Identities = 81/92 (88%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactc 107
|||||||||||||||||||||||||||||| ||||| ||| | |||||||||||
Sbjct: 11 ttgacagaagatagagagcacagatgatgaaatgcaa-----ggagccagcatctcactc 65
Query: 108 ctttgtgctctctatgcttctgtcatcacctt 139
||||||||||||||| ||||||||||||||||
Sbjct: 66 ctttgtgctctctattcttctgtcatcacctt 97
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 93.7 bits (47), Expect = 4e-20
Identities = 81/92 (88%), Gaps = 4/92 (4%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactc 107
||||||||||||||||||||||||||||| | |||| | || |||| |||||||||
Sbjct: 11 ttgacagaagatagagagcacagatgatgttttgcagta----gactctggatctcactc 66
Query: 108 ctttgtgctctctatgcttctgtcatcacctt 139
|||||||||||||||||||||| |||||||||
Sbjct: 67 ctttgtgctctctatgcttctgccatcacctt 98
>40336_rco-MIR156g:mirbase
Length = 97
Score = 79.8 bits (40), Expect = 6e-16
Identities = 77/88 (87%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactc 107
||||||||||||||||||||| || ||||| |||| | | ||| ||||||||||||||
Sbjct: 6 ttgacagaagatagagagcactgacgatgaaatgca-tgatgggactctgcatctcactc 64
Query: 108 ctttgtgctctctatgcttctgtcatca 135
|||||||||||||| ||||||||||||
Sbjct: 65 ctttgtgctctctagtcttctgtcatca 92
>41077_gra-MIR157b:mirbase
Length = 91
Score = 75.8 bits (38), Expect = 1e-14
Identities = 76/88 (86%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactc 107
||||||||||||||||||||||||||||| ||| | | || || ||||| |||||
Sbjct: 5 ttgacagaagatagagagcacagatgatggtgttgcctatgtgcat---gcatcccactc 61
Query: 108 ctttgtgctctctatgcttctgtcatca 135
||||||||||||||||||||||||||||
Sbjct: 62 ctttgtgctctctatgcttctgtcatca 89
>41076_gra-MIR157a:mirbase
Length = 101
Score = 75.8 bits (38), Expect = 1e-14
Identities = 83/97 (85%), Gaps = 7/97 (7%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgatgatgtgcaatt-----tttggattc--tgcat 100
||||||||||||||||||||||||||||| ||||||||| | | || | |||||
Sbjct: 5 ttgacagaagatagagagcacagatgatggtgtgcaattaggagtcttgaagcaatgcat 64
Query: 101 ctcactcctttgtgctctctatgcttctgtcatcacc 137
| |||||||||||||||| ||||||||||||||||||
Sbjct: 65 cccactcctttgtgctctttatgcttctgtcatcacc 101
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 75.8 bits (38), Expect = 1e-14
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 96 tgcatctcactcctttgtgctctctatgcttctgtcatcacc 137
||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 131 tgcatatcactcctttgtgctctctatgcttctgtcatcacc 172
Score = 63.9 bits (32), Expect = 4e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgatgatgtgca 83
||||||||||||||||||||||||||||||| ||||
Sbjct: 6 ttgacagaagatagagagcacagatgatgatatgca 41
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 71.9 bits (36), Expect = 2e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 96 tgcatctcactcctttgtgctctctatgcttctgtcatcacctt 139
|||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 58 tgcatctcactcctttgtgctctctagtcttctgtcatcacctt 101
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 71.9 bits (36), Expect = 2e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 96 tgcatctcactcctttgtgctctctatgcttctgtcatcacctt 139
|||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 58 tgcatctcactcctttgtgctctctagtcttctgtcatcacctt 101
>40428_gma-MIR156d:mirbase
Length = 151
Score = 71.9 bits (36), Expect = 2e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 96 tgcatctcactcctttgtgctctctatgcttctgtcatcacctt 139
||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 95 tgcatcttactcctttgtgctctctatacttctgtcatcacctt 138
Score = 63.9 bits (32), Expect = 4e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgatgatgtgca 83
||||||||||||||||||||||||||||||| ||||
Sbjct: 21 ttgacagaagatagagagcacagatgatgatatgca 56
>39799_aly-MIR157b:mirbase
Length = 97
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 96 tgcatctcactcctttgtgctctctatgcttctgtcatcac 136
||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 57 tgcatcttactcctttgtgctctctaagcttctgtcatcac 97
>39798_aly-MIR157a:mirbase
Length = 123
Score = 65.9 bits (33), Expect = 1e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 96 tgcatctcactcctttgtgctctctatgcttctgtcatcaccttt 140
||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 69 tgcatcttactcctttgtgctctctagccttctgtcatcaccttt 113
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgat 75
||||||||||||||||||||||||||||
Sbjct: 16 ttgacagaagatagagagcacagatgat 43
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 63.9 bits (32), Expect = 4e-11
Identities = 71/84 (84%), Gaps = 5/84 (5%)
Strand = Plus / Plus
Query: 49 tgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactcc 108
|||||||||||||||||||||||||| || |||| |||| | |||||||| | |
Sbjct: 1 tgacagaagatagagagcacagatgacgaattgca-----tggagtttgcatctcgatac 55
Query: 109 tttgtgctctctatgcttctgtca 132
||||||||||||||||||||||||
Sbjct: 56 tttgtgctctctatgcttctgtca 79
>40013_ath-MIR157d:mirbase
Length = 221
Score = 63.9 bits (32), Expect = 4e-11
Identities = 45/48 (93%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 94 tctgcatctc-actcctttgtgctctctatgcttctgtcatcaccttt 140
|||||||||| | |||| ||||||||||||||||||||||||||||||
Sbjct: 154 tctgcatctctattcctatgtgctctctatgcttctgtcatcaccttt 201
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgacagaagatagagagcac 68
||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcac 43
>39801_aly-MIR157d:mirbase
Length = 256
Score = 63.9 bits (32), Expect = 4e-11
Identities = 45/48 (93%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 94 tctgcatctc-actcctttgtgctctctatgcttctgtcatcaccttt 140
|||||||||| | |||| ||||||||||||||||||||||||||||||
Sbjct: 172 tctgcatctctattcctatgtgctctctatgcttctgtcatcaccttt 219
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgacagaagatagagagcac 68
||||||||||||||||||||
Sbjct: 38 tgacagaagatagagagcac 57
>40429_gma-MIR156e:mirbase
Length = 124
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 97 gcatctcactcctttgtgctctctatgcttctgtcatca 135
||||||||||||||||||||||||| ||||||||||||
Sbjct: 69 gcatctcactcctttgtgctctctagtcttctgtcatca 107
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 60.0 bits (30), Expect = 6e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgatga 77
||||||||||||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcacagatgatga 35
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 97 gcatctcactcctttgtgctctctatgcttctgtcatcacc 137
|||||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 54 gcatctcattcctttgtgctctttattcttctgtcatcacc 94
>40011_ath-MIR157b:mirbase
Length = 132
Score = 60.0 bits (30), Expect = 6e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 96 tgcatctcactcctttgtgctctctatgcttctgtcatcacc 137
||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 72 tgcatcttactcctttgtgctctctagccttctgtcatcacc 113
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgat 75
||||||||||||||||||||||||||||
Sbjct: 19 ttgacagaagatagagagcacagatgat 46
>40010_ath-MIR157a:mirbase
Length = 98
Score = 60.0 bits (30), Expect = 6e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgatga 77
||||||||||||||||||||||||||||||
Sbjct: 4 ttgacagaagatagagagcacagatgatga 33
Score = 60.0 bits (30), Expect = 6e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 96 tgcatctcactcctttgtgctctctatgcttctgtcatcacc 137
||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 57 tgcatcttactcctttgtgctctctagccttctgtcatcacc 98
>40012_ath-MIR157c:mirbase
Length = 217
Score = 56.0 bits (28), Expect = 9e-09
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 95 ctgcatctc-actcctttgtgctctctatgcttctgtcatcaccttta 141
||||||||| |||| |||||||||||||| ||||||||| ||||||||
Sbjct: 150 ctgcatctctactcttttgtgctctctatacttctgtcaccaccttta 197
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcac 68
|||||||||||||||||||||
Sbjct: 24 ttgacagaagatagagagcac 44
>39800_aly-MIR157c:mirbase
Length = 293
Score = 56.0 bits (28), Expect = 9e-09
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 95 ctgcatctc-actcctttgtgctctctatgcttctgtcatcaccttta 141
||||||||| |||| |||||||||||||| ||||||||| ||||||||
Sbjct: 201 ctgcatctctactcttttgtgctctctatacttctgtcaccaccttta 248
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcac 68
|||||||||||||||||||||
Sbjct: 55 ttgacagaagatagagagcac 75
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 106 tcctttgtgctctctatgcttctgtcatcac 136
|||||||||||||||| ||||||||||||||
Sbjct: 86 tcctttgtgctctctaagcttctgtcatcac 116
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 106 tcctttgtgctctctatgcttctgtcatcac 136
|||||||||||||||| ||||||||||||||
Sbjct: 86 tcctttgtgctctctaagcttctgtcatcac 116
>41525_sly-MIR156a:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 109 tttgtgctctctatgcttctgtcat 133
|||||||||||||||||||||||||
Sbjct: 76 tttgtgctctctatgcttctgtcat 100
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgatgat 78
||||||||||||||||||||| ||||||||
Sbjct: 1 ttgacagaagatagagagcactaatgatgat 31
>40654_mtr-MIR156g:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 106 tcctttgtgctctctatgcttctgtcatcacc 137
|||||||||||||||| ||||||||||||||
Sbjct: 89 tcctttgtgctctctagacttctgtcatcacc 120
>40431_gma-MIR156g:mirbase
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcacagatgat 75
||||||||||||||||||||||| ||||
Sbjct: 24 ttgacagaagatagagagcacaggtgat 51
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 48 ttgacagaagatagagagcaca 69
||||||||||||||||||||||
Sbjct: 107 ttgacagaagatagagagcaca 86
>39727_smo-MIR156b:mirbase
Length = 112
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 tgacagaagatagagagcacaga 71
|||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacaga 34
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 112 gtgctctctatgcttctgtcatca 135
||||||||||| ||||||||||||
Sbjct: 80 gtgctctctattcttctgtcatca 103
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcaca 69
||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcaca 32
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcaca 69
||||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcaca 42
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcaca 69
||||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcaca 27
>40427_gma-MIR156c:mirbase
Length = 185
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcaca 69
||||||||||||||||||||||
Sbjct: 146 ttgacagaagatagagagcaca 167
>40335_rco-MIR156f:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcaca 69
||||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcaca 27
>41527_sly-MIR156c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcac 68
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>41526_sly-MIR156b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcac 68
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>40310_bra-MIR157a:mirbase
Length = 149
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcac 68
|||||||||||||||||||||
Sbjct: 14 ttgacagaagatagagagcac 34
>40304_bol-MIR157a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcac 68
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 104 actcctttgtgctctctatgcttctgtca 132
|||| |||||||||||||| |||||||||
Sbjct: 73 actcttttgtgctctctatacttctgtca 101
>40260_bna-MIR156c:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcac 68
|||||||||||||||||||||
Sbjct: 18 ttgacagaagatagagagcac 38
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 104 actcctttgtgctctctatgcttctgtca 132
|||| |||||||||||||| |||||||||
Sbjct: 109 actcttttgtgctctctatacttctgtca 137
>40259_bna-MIR156b:mirbase
Length = 208
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 ttgacagaagatagagagcac 68
|||||||||||||||||||||
Sbjct: 25 ttgacagaagatagagagcac 45
>39416_pta-MIR156b:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tgacagaagatagagagcaca 69
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
>39415_pta-MIR156a:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tgacagaagatagagagcaca 69
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
