miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|O22286|BPM3_ARATH BTB/POZ and MATH domain-containing protein 3
OS=Arabidopsis thaliana GN=BPM3 PE=1 SV=1
Length = 408
Score = 68.6 bits (166), Expect = 1e-11
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 7/132 (5%)
Frame = +2
Query: 2 DYADFISVYLVLHSANAKDVEVVFTFTLLDKAGE----LVPSYSRTMAG--HTFAKKGSS 163
D + +IS+++ L S ++ D+ +F TL+D++G+ + + R + G +T KGS
Sbjct: 71 DQSSYISLFIALAS-DSNDIRALFELTLMDQSGKGKHKVHSHFDRALEGGPYTLKYKGSM 129
Query: 164 GGYHDFIKKVDLEGSLYLRDDDSFSFRCDVNVLKHNQQKCDQ-PVVIPPSNLCRHLKDLL 340
GY F K+ LE S YL+DD C V V++ + Q +V+P SN+ + LKDLL
Sbjct: 130 WGYKRFFKRSALETSDYLKDD-CLVINCTVGVVRARLEGPKQYGIVLPLSNMGQGLKDLL 188
Query: 341 ESMDGADVIFHV 376
+S G D+ F V
Sbjct: 189 DSEVGCDIAFQV 200
>sp|Q8L765|BPM1_ARATH BTB/POZ and MATH domain-containing protein 1
OS=Arabidopsis thaliana GN=BPM1 PE=1 SV=1
Length = 407
Score = 62.0 bits (149), Expect = 1e-09
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Frame = +2
Query: 2 DYADFISVYLVLHSANAKDVEVVFTFTLLDKAG----ELVPSYSRTMAG--HTFAKKGSS 163
D + ++S+++ L S A DV +F TL+D++G ++ + R + +T +GS
Sbjct: 80 DNSSYVSLFIALASEGA-DVRALFELTLVDQSGNGKHKVHSHFGRALDSGPYTLKYRGSM 138
Query: 164 GGYHDFIKKVDLEGSLYLRDDDSFSFRCDVNVLKH-NQQKCDQPVVIPPSNLCRHLKDLL 340
GY F ++ LE S YL+++ S RC V V+K + + +P SNL + L +LL
Sbjct: 139 WGYKRFFRRSSLESSDYLKEN-SLLVRCRVGVVKSVTEGPRYYNIPVPVSNLGQQLGNLL 197
Query: 341 ESMDGADVIFHV 376
ES G DV+F V
Sbjct: 198 ESGKGCDVVFQV 209
>sp|Q9M8J9|BPM2_ARATH BTB/POZ and MATH domain-containing protein 2
OS=Arabidopsis thaliana GN=BPM2 PE=1 SV=1
Length = 406
Score = 60.1 bits (144), Expect = 4e-09
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Frame = +2
Query: 2 DYADFISVYLVLHSANAKDVEVVFTFTLLDKAG----ELVPSYSRTMAG--HTFAKKGSS 163
D + ++S+++ L S A DV +F TL+D++G ++ + RT+ +T +GS
Sbjct: 79 DNSVYVSLFIALASEGA-DVRALFELTLVDQSGNERHKVHSHFGRTLESGPYTLKYRGSM 137
Query: 164 GGYHDFIKKVDLEGSLYLRDDDSFSFRCDVNVLKHNQQ--KCDQPVVIPPSNLCRHLKDL 337
GY F K+ LE S YL+ D+ RC V V+K + +C + +P S L + L
Sbjct: 138 WGYKRFFKRSLLESSDYLK-DNGLLVRCCVGVVKSRTEGPRC-YNIPVPVSGLGQQFGKL 195
Query: 338 LESMDGADVIFHV 376
LES GADV F V
Sbjct: 196 LESGKGADVTFEV 208
>sp|A1L4W5|BPM6_ARATH BTB/POZ and MATH domain-containing protein 6
OS=Arabidopsis thaliana GN=BPM6 PE=1 SV=1
Length = 415
Score = 58.5 bits (140), Expect = 1e-08
Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Frame = +2
Query: 2 DYADFISVYLVLHSANAKDVEVVFTFTLLDKAGE----LVPSYSRTMAG--HTFAKKGSS 163
D + ++SV++VL S +V +F +L+D++G+ + ++R++ G +T +GS
Sbjct: 82 DNSSYVSVFIVLAS-ECTEVRALFELSLVDQSGKGKHKVHSHFNRSLDGGPYTLKYRGSM 140
Query: 164 GGYHDFIKKVDLEGSLYLRDDDSFSFRCDVNVLKHNQQKCDQ--PVVIPPSNLCRHLKDL 337
GY F ++ LE S YL+ DD C V V+ ++ C + + +P S L H L
Sbjct: 141 WGYKRFFRRSLLETSDYLK-DDCLKINCTVGVVV-SEMHCPRLLSIHVPDSELGSHFGKL 198
Query: 338 LESMDGADVIFHV 376
L+++ G+DV F V
Sbjct: 199 LDTLQGSDVTFDV 211
>sp|Q1EBV6|BPM5_ARATH BTB/POZ and MATH domain-containing protein 5
OS=Arabidopsis thaliana GN=BPM5 PE=1 SV=1
Length = 410
Score = 58.5 bits (140), Expect = 1e-08
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Frame = +2
Query: 2 DYADFISVYLVLHSANAKDVEVVFTFTLLDKAGE----LVPSYSRTMAG--HTFAKKGSS 163
D + ++SV++ L S +V +F L+D++G+ + + R++ G +T +GS
Sbjct: 75 DNSSYVSVFIALASEGT-EVRALFELALVDQSGKGKHKVHSHFERSLDGGPYTLKYRGSM 133
Query: 164 GGYHDFIKKVDLEGSLYLRDDDSFSFRCDVNVLKHNQQKCDQ--PVVIPPSNLCRHLKDL 337
GY F ++ LE S YL+ DD C V V+ ++ C Q V +P S L H L
Sbjct: 134 WGYKRFFRRSILETSDYLK-DDCLIINCTVGVVV-SEILCPQLHSVHVPDSELGSHFGVL 191
Query: 338 LESMDGADVIFHV 376
L+SM+G+D+ F++
Sbjct: 192 LDSMEGSDITFNI 204
>sp|Q9SRV1|BPM4_ARATH BTB/POZ and MATH domain-containing protein 4
OS=Arabidopsis thaliana GN=BPM4 PE=1 SV=1
Length = 465
Score = 56.6 bits (135), Expect = 5e-08
Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Frame = +2
Query: 2 DYADFISVYLVLHSANAKDVEVVFTFTLLDKAGE----LVPSYSRTMAG--HTFAKKGSS 163
D + ++SV++ L S + DV +F +LLD++G+ + + R + +T +GS
Sbjct: 93 DNSAYVSVFIALAS-DGTDVRALFELSLLDQSGKGKHKVHSHFDRALESGPYTLKYRGSM 151
Query: 164 GGYHDFIKKVDLEGSLYLRDDDSFSFRCDVNVLKHNQQKCDQ--PVVIPPSNLCRHLKDL 337
GY F +++ LE S +L+ DD C V V+ ++ C + + +P S++ H L
Sbjct: 152 WGYKRFFRRLMLETSDFLK-DDCLKINCTVGVVV-SEIDCPRLHSIHVPASDIGSHFGML 209
Query: 338 LESMDGADVIFHV 376
LE+ DG+D+ F+V
Sbjct: 210 LENEDGSDITFNV 222
