miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00253;mir-101;BAAF04023117.1/37025-37099 8090:Oryzias latipes
(Japanese medaka)
Length = 75
Score = 135 bits (68), Expect = 1e-31
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 18 tgtccattttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtactatgat 77
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 tgtccattttcagttatcatggtaccggtgctgtgtgcctatcaagtacagtactatgat 60
Query: 78 aactgaagattg 89
||||||||||||
Sbjct: 61 aactgaagattg 72
>RF00253;mir-101;AADN02066347.1/1501-1427 9031:Gallus gallus
(chicken)
Length = 75
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 24 ttttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtactatgataactga 83
||||| |||||||||||||||||||||| | | || | |||||||||| ||||||||||
Sbjct: 7 ttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataactga 66
Query: 84 aga 86
|||
Sbjct: 67 aga 69
>RF00253;mir-101;AAVX01090491.1/533-606 7868:Callorhinchus milii
(ghost shark)
Length = 74
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 18 tgtccattttcagttatcatggtaccggtgctgt 51
||||| ||||||||||||| |||||||||||||
Sbjct: 1 tgtcctttttcagttatcacagtaccggtgctgt 34
