miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00647;MIR164;AC182692.2/98036-98127 3694:Populus trichocarpa
Length = 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 27 catgctggagaagcagggtacgtgctaaatc 57
|||||||||||||||||| || |||||||||
Sbjct: 6 catgctggagaagcagggcacatgctaaatc 36
>RF00647;MIR164;FM162588.1/798-884 310672:Cabomba aquatica
Length = 87
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 26 tcatgctggagaagcagggtacgtgc 51
||||||||||||||||||| ||||||
Sbjct: 5 tcatgctggagaagcagggcacgtgc 30
>RF00647;MIR164;AAAA02016828.1/18978-18860 39946:Oryza sativa
Indica Group
Length = 119
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 23 ggttcatgctggagaagcagggtacgtgctaaat 56
||||| || |||||||||||||||||||| ||||
Sbjct: 2 ggttcttgttggagaagcagggtacgtgcaaaat 35
