miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39550_ppt-MIR902c:mirbase
Length = 134
Score = 266 bits (134), Expect = 4e-72
Identities = 134/134 (100%)
Strand = Plus / Plus
Query: 1 tctattggcgtatgctcatttcctccttctagcgtatgatgcagattcttcatctgttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctattggcgtatgctcatttcctccttctagcgtatgatgcagattcttcatctgttga 60
Query: 61 actgaatttttcttagtgatgcagacgaaggtctgcatcatagtcaagggggaggaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actgaatttttcttagtgatgcagacgaaggtctgcatcatagtcaagggggaggaaata 120
Query: 121 tatatcatgattct 134
||||||||||||||
Sbjct: 121 tatatcatgattct 134
>39554_ppt-MIR902e:mirbase
Length = 133
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 82 cagacgaaggtctgcatcatagtcaagggggaggaaatat 121
||||||||||||||||||||||||||| || || ||||||
Sbjct: 81 cagacgaaggtctgcatcatagtcaagaggaagcaaatat 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 35 tatgatgcagattcttcatctgtt 58
||||||||||||||||||||||||
Sbjct: 34 tatgatgcagattcttcatctgtt 57
>39553_ppt-MIR902e:mirbase
Length = 133
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 82 cagacgaaggtctgcatcatagtcaagggggaggaaatat 121
||||||||||||||||||||||||||| || || ||||||
Sbjct: 81 cagacgaaggtctgcatcatagtcaagaggaagcaaatat 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 35 tatgatgcagattcttcatctgtt 58
||||||||||||||||||||||||
Sbjct: 34 tatgatgcagattcttcatctgtt 57
>39548_ppt-MIR902b:mirbase
Length = 223
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 19 tttcctccttctagcgtatgatgcagattcttcatctgtt 58
|||||| | |||||| ||||||||||||||||||||||||
Sbjct: 82 tttccttcctctagcctatgatgcagattcttcatctgtt 121
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 cagacgaaggtctgcatcatagtcaag 108
|||||||||||||||||||||| ||||
Sbjct: 148 cagacgaaggtctgcatcatagccaag 174
>39547_ppt-MIR902b:mirbase
Length = 223
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 19 tttcctccttctagcgtatgatgcagattcttcatctgtt 58
|||||| | |||||| ||||||||||||||||||||||||
Sbjct: 82 tttccttcctctagcctatgatgcagattcttcatctgtt 121
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 cagacgaaggtctgcatcatagtcaag 108
|||||||||||||||||||||| ||||
Sbjct: 148 cagacgaaggtctgcatcatagccaag 174
>39558_ppt-MIR902g:mirbase
Length = 141
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 82 cagacgaaggtctgcatcatagtcaag 108
|||||||||||||||||||||||||||
Sbjct: 89 cagacgaaggtctgcatcatagtcaag 115
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 35 tatgatgcagattcttcatctgttgaactgaat 67
|||||||||||||||||||||||| | ||||||
Sbjct: 34 tatgatgcagattcttcatctgtttagctgaat 66
>39557_ppt-MIR902g:mirbase
Length = 141
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 82 cagacgaaggtctgcatcatagtcaag 108
|||||||||||||||||||||||||||
Sbjct: 89 cagacgaaggtctgcatcatagtcaag 115
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 35 tatgatgcagattcttcatctgttgaactgaat 67
|||||||||||||||||||||||| | ||||||
Sbjct: 34 tatgatgcagattcttcatctgtttagctgaat 66
>39546_ppt-MIR902a:mirbase
Length = 223
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 cagacgaaggtctgcatcatagtcaag 108
|||||||||||||||||||||| ||||
Sbjct: 148 cagacgaaggtctgcatcatagccaag 174
>39545_ppt-MIR902a:mirbase
Length = 223
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 cagacgaaggtctgcatcatagtcaag 108
|||||||||||||||||||||| ||||
Sbjct: 148 cagacgaaggtctgcatcatagccaag 174
>39556_ppt-MIR902f:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 35 tatgatgcagattcttcatctg 56
||||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatctg 51
>39555_ppt-MIR902f:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 35 tatgatgcagattcttcatctg 56
||||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatctg 51
>39552_ppt-MIR902d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 35 tatgatgcagattcttcatct 55
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
>39551_ppt-MIR902d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 35 tatgatgcagattcttcatct 55
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
