miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51682_ptc-miR169y:pmrd
Length = 123
Score = 244 bits (123), Expect = 1e-65
Identities = 123/123 (100%)
Strand = Plus / Plus
Query: 1 tcttgtttagtagccatggatgaattgcctgcttccaaaatgaggtgtcaagccgagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttgtttagtagccatggatgaattgcctgcttccaaaatgaggtgtcaagccgagata 60
Query: 61 aacatacaagtttgatccctcattggggttcccaggcagtcatcagcttggctaacttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacatacaagtttgatccctcattggggttcccaggcagtcatcagcttggctaacttga 120
Query: 121 cag 123
|||
Sbjct: 121 cag 123
>48361_bna-miR169l:pmrd
Length = 199
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 tgtttagtagccatggatgaattgcctgct 33
||||||||||||| |||||| |||||||||
Sbjct: 18 tgtttagtagccaaggatgacttgcctgct 47
>48359_bna-miR169j:pmrd
Length = 167
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 tgtttagtagccatggatgaattgcctgct 33
||||||||||||| |||||| |||||||||
Sbjct: 2 tgtttagtagccaaggatgacttgcctgct 31
>48358_bna-miR169i:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 tgtttagtagccatggatgaattgcctgct 33
||||||||||||| |||||| |||||||||
Sbjct: 8 tgtttagtagccaaggatgacttgcctgct 37
>46974_ath-miR169n:pmrd
Length = 215
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 4 tgtttagtagccatggatgaattgcctg 31
||||||||||||| |||||| |||||||
Sbjct: 38 tgtttagtagccaaggatgacttgcctg 65
>46970_ath-miR169j:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 4 tgtttagtagccatggatgaattgcctg 31
||||||||||||| |||||| |||||||
Sbjct: 44 tgtttagtagccaaggatgacttgcctg 71
