miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54426_sbi-miR166k:pmrd
Length = 103
Score = 163 bits (82), Expect = 3e-41
Identities = 96/103 (93%)
Strand = Plus / Plus
Query: 1 gaatggaggctgatccaagatcctcctcgagtgcgaaacaaatgccgnnnnnnnggtttt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 gaatggaggctgatccaagatcctcctcgagtgcgaaacaaatgccgtttttttggtttt 60
Query: 61 gtgtttgctctcttggggggtctcggaccaggcttcattcctc 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgtttgctctcttggggggtctcggaccaggcttcattcctc 103
>48846_osa-miR166c:pmrd
Length = 125
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 74 tggggggtctcggaccaggcttcattcc 101
|||||||| |||||||||||||||||||
Sbjct: 82 tggggggtttcggaccaggcttcattcc 109
>54974_zma-miR166r:pmrd
Length = 83
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 ggtctcggaccaggcttcattcc 101
|||||||||||||||||||||||
Sbjct: 59 ggtctcggaccaggcttcattcc 81
>54971_zma-miR166o:pmrd
Length = 95
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 ggtctcggaccaggcttcattcc 101
|||||||||||||||||||||||
Sbjct: 65 ggtctcggaccaggcttcattcc 87
>54968_zma-miR166l:pmrd
Length = 137
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcctc 103
|||||||||||||||||||||||
Sbjct: 96 tctcggaccaggcttcattcctc 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 gaatggaggctgatccaagatcct 24
|||||||||||| |||||||||||
Sbjct: 24 gaatggaggctggtccaagatcct 47
>54965_zma-miR166i:pmrd
Length = 83
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 ggtctcggaccaggcttcattcc 101
|||||||||||||||||||||||
Sbjct: 59 ggtctcggaccaggcttcattcc 81
>54424_sbi-miR166i:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 ggtctcggaccaggcttcattcc 101
|||||||||||||||||||||||
Sbjct: 62 ggtctcggaccaggcttcattcc 84
>48850_osa-miR166g:pmrd
Length = 145
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcctc 103
|||||||||||||||||||||||
Sbjct: 113 tctcggaccaggcttcattcctc 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gaatggaggctgatccaagatc 22
||||||||||||||||||||||
Sbjct: 14 gaatggaggctgatccaagatc 35
>48849_osa-miR166f:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 ggtctcggaccaggcttcattcc 101
|||||||||||||||||||||||
Sbjct: 68 ggtctcggaccaggcttcattcc 90
>48713_mtr-miR166c:pmrd
Length = 171
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcctc 103
|||||||||||||||||||||||
Sbjct: 149 tctcggaccaggcttcattcctc 171
>54789_vvi-miR166a:pmrd
Length = 130
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcct 102
||||||||||||||||||||||
Sbjct: 98 tctcggaccaggcttcattcct 119
>54577_smo-miR166b:pmrd
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 80 gtctcggaccaggcttcattcc 101
||||||||||||||||||||||
Sbjct: 96 gtctcggaccaggcttcattcc 117
>52336_ptc-miRf10514-akr:pmrd
Length = 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcct 102
||||||||||||||||||||||
Sbjct: 117 tctcggaccaggcttcattcct 138
>51641_ptc-miR166q:pmrd
Length = 151
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcct 102
||||||||||||||||||||||
Sbjct: 121 tctcggaccaggcttcattcct 142
>51639_ptc-miR166o:pmrd
Length = 324
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcct 102
||||||||||||||||||||||
Sbjct: 294 tctcggaccaggcttcattcct 315
>51638_ptc-miR166n:pmrd
Length = 331
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcct 102
||||||||||||||||||||||
Sbjct: 301 tctcggaccaggcttcattcct 322
>51336_pga-miR166:pmrd
Length = 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcct 102
||||||||||||||||||||||
Sbjct: 30 tctcggaccaggcttcattcct 51
>46868_aqc-miR166c:pmrd
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcct 102
||||||||||||||||||||||
Sbjct: 87 tctcggaccaggcttcattcct 108
>46866_aqc-miR166a:pmrd
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 ctcggaccaggcttcattcctc 103
||||||||||||||||||||||
Sbjct: 85 ctcggaccaggcttcattcctc 106
>54973_zma-miR166q:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 67 tctcggaccaggcttcattcc 87
>54972_zma-miR166p:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 69 tctcggaccaggcttcattcc 89
>54970_zma-miR166n:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 72 tctcggaccaggcttcattcc 92
>54969_zma-miR166m:pmrd
Length = 156
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 tcggaccaggcttcattcctc 103
|||||||||||||||||||||
Sbjct: 117 tcggaccaggcttcattcctc 137
>54961_zma-miR166e:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 65 tctcggaccaggcttcattcc 85
>54960_zma-miR166d:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 82 tctcggaccaggcttcattcc 102
>54959_zma-miR166c:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 70 tctcggaccaggcttcattcc 90
>54958_zma-miR166b:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 94 tctcggaccaggcttcattcc 114
>54957_zma-miR166a:pmrd
Length = 213
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 187 tctcggaccaggcttcattcc 207
>54796_vvi-miR166h:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 67 tctcggaccaggcttcattcc 87
>54790_vvi-miR166b:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 tcggaccaggcttcattcctc 103
|||||||||||||||||||||
Sbjct: 68 tcggaccaggcttcattcctc 88
>54576_smo-miR166a:pmrd
Length = 145
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 106 tctcggaccaggcttcattcc 126
>54423_sbi-miR166h:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 160 tctcggaccaggcttcattcc 180
>54421_sbi-miR166f:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 tcggaccaggcttcattcctc 103
|||||||||||||||||||||
Sbjct: 100 tcggaccaggcttcattcctc 120
>54419_sbi-miR166d:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 65 tctcggaccaggcttcattcc 85
>54416_sbi-miR166a:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 86 tctcggaccaggcttcattcc 106
>54379_pvu-miR166:pmrd
Length = 144
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 112 tctcggaccaggcttcattcc 132
>51637_ptc-miR166m:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 74 tctcggaccaggcttcattcc 94
>51632_ptc-miR166h:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 70 tctcggaccaggcttcattcc 90
>51631_ptc-miR166g:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 72 tctcggaccaggcttcattcc 92
>48851_osa-miR166h:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 tcggaccaggcttcattcctc 103
|||||||||||||||||||||
Sbjct: 89 tcggaccaggcttcattcctc 109
>48847_osa-miR166d:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 89 tctcggaccaggcttcattcc 109
>48845_osa-miR166b:pmrd
Length = 206
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 166 tctcggaccaggcttcattcc 186
>48844_osa-miR166a:pmrd
Length = 145
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 108 tctcggaccaggcttcattcc 128
>48714_mtr-miR166d:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 75 tctcggaccaggcttcattcc 95
>48711_mtr-miR165:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 60 tctcggaccaggcttcattcc 80
>48672_ini-miR166:pmrd
Length = 169
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 tcggaccaggcttcattcctc 103
|||||||||||||||||||||
Sbjct: 149 tcggaccaggcttcattcctc 169
>48552_gma-miR166q:pmrd
Length = 156
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 134 tctcggaccaggcttcattcc 154
>48549_gma-miR166b:pmrd
Length = 167
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 126 tctcggaccaggcttcattcc 146
>48345_bna-miR166d:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 75 tctcggaccaggcttcattcc 95
>46951_ath-miR166g:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 83 tctcggaccaggcttcattcc 103
>46948_ath-miR166d:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 85 tctcggaccaggcttcattcc 105
>46947_ath-miR166c:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 tctcggaccaggcttcattcc 101
|||||||||||||||||||||
Sbjct: 101 tctcggaccaggcttcattcc 121
>46869_aqc-miR166d:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 tcggaccaggcttcattcctc 103
|||||||||||||||||||||
Sbjct: 105 tcggaccaggcttcattcctc 125
>54792_vvi-miR166d:pmrd
Length = 160
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 ctcggaccaggcttcattcc 101
||||||||||||||||||||
Sbjct: 128 ctcggaccaggcttcattcc 147
>54425_sbi-miR166j:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 ctcggaccaggcttcattcc 101
||||||||||||||||||||
Sbjct: 84 ctcggaccaggcttcattcc 103
>51636_ptc-miR166l:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 ctcggaccaggcttcattcc 101
||||||||||||||||||||
Sbjct: 67 ctcggaccaggcttcattcc 86
>51633_ptc-miR166i:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 ctcggaccaggcttcattcc 101
||||||||||||||||||||
Sbjct: 73 ctcggaccaggcttcattcc 92
>51373_ppt-miR166f:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 ctcggaccaggcttcattcc 101
||||||||||||||||||||
Sbjct: 73 ctcggaccaggcttcattcc 92
>48856_osa-miR166m:pmrd
Length = 200
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 ctcggaccaggcttcattcc 101
||||||||||||||||||||
Sbjct: 146 ctcggaccaggcttcattcc 165
>48553_gma-miR166r:pmrd
Length = 136
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 ctcggaccaggcttcattcc 101
||||||||||||||||||||
Sbjct: 115 ctcggaccaggcttcattcc 134
