miRNEST 2.0, an integrative microRNA resource :: BLAST
>45488_miR171:micropc
Length = 100
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1 ggtattggcgcgcctcaatccgaaggcgtggctgatt 37
|||||||||| |||||||||||||||| |||||||||
Sbjct: 1 ggtattggcgtgcctcaatccgaaggcatggctgatt 37
Score = 56.0 bits (28), Expect = 4e-09
Identities = 35/36 (97%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 45 gcagccatgtt-cttggattgagccgcgtcaatatc 79
||||||||||| ||||||||||||||||||||||||
Sbjct: 65 gcagccatgtttcttggattgagccgcgtcaatatc 100
>44972_miR171:micropc
Length = 102
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1 ggtattggcgcgcctcaatccgaaggcgtggctgatt 37
|||||||||| |||||||||||||||| |||||||||
Sbjct: 2 ggtattggcgtgcctcaatccgaaggcatggctgatt 38
Score = 58.0 bits (29), Expect = 1e-09
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 45 gcagccatgtt-cttggattgagccgcgtcaatatct 80
||||||||||| |||||||||||||||||||||||||
Sbjct: 66 gcagccatgtttcttggattgagccgcgtcaatatct 102
>44829_miR171:micropc
Length = 100
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1 ggtattggcgcgcctcaatccgaaggcgtggctgatt 37
|||||||||| |||||||||||||||| |||||||||
Sbjct: 1 ggtattggcgtgcctcaatccgaaggcatggctgatt 37
Score = 56.0 bits (28), Expect = 4e-09
Identities = 35/36 (97%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 45 gcagccatgtt-cttggattgagccgcgtcaatatc 79
||||||||||| ||||||||||||||||||||||||
Sbjct: 65 gcagccatgtttcttggattgagccgcgtcaatatc 100
>45955_miR171:micropc
Length = 98
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 2 gtattggcgcgcctcaatccgaaggcgtggctgatt 37
||||||||| |||||||||||||||| |||||||||
Sbjct: 1 gtattggcgtgcctcaatccgaaggcatggctgatt 36
Score = 54.0 bits (27), Expect = 2e-08
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 45 gcagccatgtt-cttggattgagccgcgtcaatat 78
||||||||||| |||||||||||||||||||||||
Sbjct: 64 gcagccatgtttcttggattgagccgcgtcaatat 98
>46163_miR171:micropc
Length = 83
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 47 agccatgttcttggattgagccgcgtcaatatct 80
|||||||| || |||||||||||||||||||||
Sbjct: 50 agccatgtgatttgattgagccgcgtcaatatct 83
>46553_miR171:micropc
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 47 agccatgttcttggattgagccgcgtcaatatc 79
|||||||| || ||||||||||||||||||||
Sbjct: 49 agccatgtgatttgattgagccgcgtcaatatc 81
>45160_miR171:micropc
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 47 agccatgttcttggattgagccgcgtcaatatc 79
|||||||| || ||||||||||||||||||||
Sbjct: 49 agccatgtgatttgattgagccgcgtcaatatc 81
>44859_miR171:micropc
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 gattgagccgcgtcaatatct 80
|||||||||||||||||||||
Sbjct: 64 gattgagccgcgtcaatatct 84
>46684_miR171:micropc
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gattgagccgcgtcaatatc 79
||||||||||||||||||||
Sbjct: 60 gattgagccgcgtcaatatc 79
>46257_miR171:micropc
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gattgagccgcgtcaatatc 79
||||||||||||||||||||
Sbjct: 64 gattgagccgcgtcaatatc 83
>45523_miR171:micropc
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 attgagccgcgtcaatatct 80
||||||||||||||||||||
Sbjct: 63 attgagccgcgtcaatatct 82
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 ggtattggcgcgcctcaat 19
|||||||||||||||||||
Sbjct: 2 ggtattggcgcgcctcaat 20
>45361_miR171:micropc
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gattgagccgcgtcaatatc 79
||||||||||||||||||||
Sbjct: 60 gattgagccgcgtcaatatc 79
>45337_miR171:micropc
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 47 agccatgttcttggattgagccgcgtcaatat 78
|||||||| || |||||||||||||||||||
Sbjct: 48 agccatgtgatttgattgagccgcgtcaatat 79
>45171_miR171:micropc
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gattgagccgcgtcaatatc 79
||||||||||||||||||||
Sbjct: 64 gattgagccgcgtcaatatc 83
>46593_miR171:micropc
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 ggtattggcgcgcctcaat 19
|||||||||||||||||||
Sbjct: 1 ggtattggcgcgcctcaat 19
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 61 attgagccgcgtcaatatc 79
|||||||||||||||||||
Sbjct: 62 attgagccgcgtcaatatc 80
>46581_miR171:micropc
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 60 gattgagccgcgtcaatat 78
|||||||||||||||||||
Sbjct: 63 gattgagccgcgtcaatat 81
>45662_miR171:micropc
Length = 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 60 gattgagccgcgtcaatat 78
|||||||||||||||||||
Sbjct: 60 gattgagccgcgtcaatat 78
>45177_miR171:micropc
Length = 79
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 61 attgagccgcgtcaatatc 79
|||||||||||||||||||
Sbjct: 61 attgagccgcgtcaatatc 79
