miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45845_miR396:micropc
Length = 108
Score = 214 bits (108), Expect = 1e-56
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatctggctttatcactccatgaatatgattcttgcgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttccacatctttcttgaactgcatctggctttatcactccatgaatatgattcttgcgag 60
Query: 61 acttcggaggaggtgacgcgatgatggcggttcaataaagctgtggga 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acttcggaggaggtgacgcgatgatggcggttcaataaagctgtggga 108
>46751_miR396:micropc
Length = 108
Score = 190 bits (96), Expect = 1e-49
Identities = 105/108 (97%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatctggctttatcactccatgaatatgattcttgcgag 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 ttccacagctttcttgaactgcatctggctttatcactccatgaatatgattcttgcaag 60
Query: 61 acttcggaggaggtgacgcgatgatggcggttcaataaagctgtggga 108
||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acttcggtggaggtgacgcgatgatggcggttcaataaagctgtggga 108
>46345_miR396:micropc
Length = 108
Score = 190 bits (96), Expect = 1e-49
Identities = 105/108 (97%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatctggctttatcactccatgaatatgattcttgcgag 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 ttccacagctttcttgaactgcatctggctttatcactccatgaatatgattcttgcaag 60
Query: 61 acttcggaggaggtgacgcgatgatggcggttcaataaagctgtggga 108
||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acttcggtggaggtgacgcgatgatggcggttcaataaagctgtggga 108
>45064_miR396:micropc
Length = 108
Score = 190 bits (96), Expect = 1e-49
Identities = 105/108 (97%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatctggctttatcactccatgaatatgattcttgcgag 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 ttccacagctttcttgaactgcatctggctttatcactccatgaatatgattcttgcaag 60
Query: 61 acttcggaggaggtgacgcgatgatggcggttcaataaagctgtggga 108
||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acttcggtggaggtgacgcgatgatggcggttcaataaagctgtggga 108
>46804_miR396:micropc
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 67 gcggttcaataaagctgtggga 88
>46787_miR396:micropc
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatct 26
||||||| ||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatct 26
>46729_miR396:micropc
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 93 gcggttcaataaagctgtggga 114
>46723_miR396:micropc
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 80 gcggttcaataaagctgtggga 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatc 25
||||||| |||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatc 25
>46571_miR396:micropc
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 94 gcggttcaataaagctgtggga 115
>46469_miR396:micropc
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 67 gcggttcaataaagctgtggga 88
>46290_miR396:micropc
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 66 gcggttcaataaagctgtggga 87
>46087_miR396:micropc
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 67 gcggttcaataaagctgtggga 88
>46014_miR396:micropc
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 93 gcggttcaataaagctgtggga 114
>45774_miR396:micropc
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 80 gcggttcaataaagctgtggga 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatc 25
||||||| |||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatc 25
>45646_miR396:micropc
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 94 gcggttcaataaagctgtggga 115
>45626_miR396:micropc
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatct 26
||||||| ||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatct 26
>45555_miR396:micropc
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 94 gcggttcaataaagctgtggga 115
>45530_miR396:micropc
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatct 26
||||||| ||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatct 26
>45477_miR396:micropc
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 80 gcggttcaataaagctgtggga 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatc 25
||||||| |||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatc 25
>45423_miR396:micropc
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 66 gcggttcaataaagctgtggga 87
>45408_miR396:micropc
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 93 gcggttcaataaagctgtggga 114
>45341_miR396:micropc
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 66 gcggttcaataaagctgtggga 87
>45339_miR396:micropc
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatct 26
||||||| ||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatct 26
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 79 gcggttcaataaagctgtggga 100
>45336_miR396:micropc
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 94 gcggttcaataaagctgtggga 115
>45046_miR396:micropc
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 94 gcggttcaataaagctgtggga 115
>45040_miR396:micropc
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatct 26
||||||| ||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatct 26
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 79 gcggttcaataaagctgtggga 100
>44996_miR396:micropc
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 94 gcggttcaataaagctgtggga 115
>44986_miR396:micropc
Length = 182
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatct 26
||||||| ||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatct 26
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 161 gcggttcaataaagctgtggga 182
>44921_miR396:micropc
Length = 182
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatct 26
||||||| ||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatct 26
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gcggttcaataaagctgtggga 108
||||||||||||||||||||||
Sbjct: 161 gcggttcaataaagctgtggga 182
>46815_miR396:micropc
Length = 110
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatc 25
||||||| |||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatc 25
>46556_miR396:micropc
Length = 113
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatc 25
||||||| |||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatc 25
>46059_miR396:micropc
Length = 113
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatc 25
||||||| |||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatc 25
>45980_miR396:micropc
Length = 113
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatc 25
||||||| |||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatc 25
>45667_miR396:micropc
Length = 110
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatc 25
||||||| |||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatc 25
>45463_miR396:micropc
Length = 113
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatc 25
||||||| |||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatc 25
>45335_miR396:micropc
Length = 113
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatc 25
||||||| |||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatc 25
>44875_miR396:micropc
Length = 113
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatc 25
||||||| |||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatc 25
>44831_miR396:micropc
Length = 110
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcatc 25
||||||| |||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatc 25
>46137_miR396:micropc
Length = 74
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcat 24
||||||| ||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
>45938_miR396:micropc
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcat 24
||||||| ||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
>45790_miR396:micropc
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcat 24
||||||| ||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
>45426_miR396:micropc
Length = 74
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcat 24
||||||| ||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
>45136_miR396:micropc
Length = 74
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcat 24
||||||| ||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
>44995_miR396:micropc
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacatctttcttgaactgcat 24
||||||| ||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
