miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 176 bits (89), Expect = 6e-44
Identities = 128/141 (90%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| |||||||||||| | |||||||||||||||| |||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattatgaatgtgggaaatgctagaatgactta 124
Query: 135 cattgtgaaacggaggaagta 155
|||||| ||||||||||||||
Sbjct: 125 cattgtaaaacggaggaagta 145
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| || ||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 60 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcata 65
|||| ||||||||| | ||||||||||||||||| ||||| || |||||||
Sbjct: 145 tacttcctccgttttacaatgtaagtcattctagcatttcccacattcata 95
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 163 bits (82), Expect = 1e-39
Identities = 127/142 (89%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||||||||||||||| ||||||||||||||||| |||||||||||| ||||| || ||
Sbjct: 146 ttactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtt 87
Query: 74 aatgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactt 133
||| |||||| | || |||||| ||||||||||||||||||||| ||| ||||||||
Sbjct: 86 aataaatctagatagatctatctatcatcaatatgaatgtgggaaatgctaaaatgactt 27
Query: 134 acattgtgaaacggaggaagta 155
||||||||||||||||||||||
Sbjct: 26 acattgtgaaacggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 120/143 (83%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||| ||| ||||| || ||||||||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgata 64
Query: 75 -atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactt 133
|| ||||| | | || ||| ||| |||||||| ||| || ||||| ||||||||||||
Sbjct: 65 gatagatctatctagatttat-taacatcaatataaatatgagaaatgctagaatgactt 123
Query: 134 acattgtgaaacggaggaagtaa 156
||||||||||||||||| |||||
Sbjct: 124 acattgtgaaacggagggagtaa 146
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 155 bits (78), Expect = 2e-37
Identities = 127/141 (90%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| |||||||| ||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| |||| || | | |||||||||||| |||||||| |||||||||||||
Sbjct: 65 atgaatcta--gatatccat-tgacatcaatatgaatatgggaaatgctagaatgactta 121
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||||||||
Sbjct: 122 cattgtgaaacggaggaagta 142
Score = 115 bits (58), Expect = 2e-25
Identities = 122/141 (86%), Gaps = 3/141 (2%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| |||||||||||| || | |
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtca 83
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||| || | | | || || ||||||||||||||||||| ||||| |||||||||||||
Sbjct: 82 atggatat--ctagattcat-taatatcaatatgaatgtgagaaatgctagaatgactta 26
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||| ||||
Sbjct: 25 cattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 147 bits (74), Expect = 6e-35
Identities = 121/136 (88%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| || ||| |||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 75 atgaatctaaccatatatat---ctaatatcaatatgaatgtgggaaatactagaatgac 131
||||||||| ||||||||| ||| ||||||||||||||||||||| ||||||||||
Sbjct: 65 atgaatctagacatatatattcattaacatcaatatgaatgtgggaaatgctagaatgac 124
Query: 132 ttacattgtgaaacgg 147
||||||||||||||||
Sbjct: 125 ttacattgtgaaacgg 140
Score = 107 bits (54), Expect = 5e-23
Identities = 122/144 (84%), Gaps = 3/144 (2%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||| |||||||| ||||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 148 tactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 89
Query: 75 atgaatctaaccatatatatc---taatatcaatatgaatgtgggaaatactagaatgac 131
|||||| || | || || ||| || ||||| |||||||||||| ||||||||||
Sbjct: 88 atgaatatatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgac 29
Query: 132 ttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 145 bits (73), Expect = 2e-34
Identities = 124/141 (87%), Gaps = 5/141 (3%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||| ||||||||||||| ||||| || ||||||||| || |||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| ||||| ||| || |||||||||||||||||| |||||||||||||
Sbjct: 80 atgaatctatacatat-----taacattaatatgaatgtgggaaatgctagaatgactta 26
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 8e-22
Identities = 120/141 (85%), Gaps = 5/141 (3%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| || |||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
|| || || || || ||| ||||||||||||||||||||| |||||||||||||
Sbjct: 65 at--atgtatagattcat---taacatcaatatgaatgtgggaaatgctagaatgactta 119
Query: 135 cattgtgaaacggaggaagta 155
||||||||||||||| ||||
Sbjct: 120 tattgtgaaacggagggagta 140
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 143 bits (72), Expect = 9e-34
Identities = 128/144 (88%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 12 tgttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaata 71
||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| ||
Sbjct: 148 tgttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 89
Query: 72 ttaatgaatcta-accatatatatctaatatcaatatgaatgtgggaaatactagaatga 130
|||||||||||| || | || ||| ||| |||||||| |||||| ||||| |||||||||
Sbjct: 88 ttaatgaatctagactagatttat-taacatcaatataaatgtgagaaatgctagaatga 30
Query: 131 cttacattgtgaaacggaggaagt 154
|||||||| |||||||||||||||
Sbjct: 29 cttacattatgaaacggaggaagt 6
Score = 117 bits (59), Expect = 5e-26
Identities = 121/139 (87%), Gaps = 2/139 (1%)
Strand = Plus / Plus
Query: 20 cctccgtttcataatgtaagtcattctagtatttctcatattcatattaatattaatgaa 79
||||||||||||||||||||||||||||| |||||||| ||| ||||| || ||||| ||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaa 69
Query: 80 tctaacc-atatatatctaatatcaatatgaatgtgggaaatactagaatgacttacatt 138
|||| | | || || ||| |||||||||||| ||| |||| |||||||||||||||||
Sbjct: 70 tctagtctagattcat-taacatcaatatgaatatggaaaatgctagaatgacttacatt 128
Query: 139 gtgaaacggaggaagtaac 157
|||||||||||| ||||||
Sbjct: 129 gtgaaacggagggagtaac 147
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 143 bits (72), Expect = 9e-34
Identities = 126/142 (88%), Gaps = 4/142 (2%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||| ||||||||| |||||||| ||||||||| || |||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||| || || || ||| ||||||||||||||||||||| |||||||||||||
Sbjct: 81 atgaatc-aatgattcat---taacatcaatatgaatgtgggaaatgctagaatgactta 26
Query: 135 cattgtgaaacggaggaagtaa 156
||||||||||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagtaa 4
Score = 103 bits (52), Expect = 8e-22
Identities = 121/142 (85%), Gaps = 4/142 (2%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| || ||
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 74 aatgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactt 133
|||||||| | || || ||| ||||||||||||||| ||||| ||||||||| ||
Sbjct: 64 aatgaatc-attgattcat---taacatcaatatgaatgtgagaaatgctagaatgaatt 119
Query: 134 acattgtgaaacggaggaagta 155
||||||||||||||||| ||||
Sbjct: 120 acattgtgaaacggagggagta 141
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 139 bits (70), Expect = 1e-32
Identities = 125/142 (88%), Gaps = 1/142 (0%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||| |||||||||||||||||||||||||||||| || ||||||| | || |||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
|| |||||| |||||||| ||| |||| |||||||||| |||| |||||||||||||
Sbjct: 84 ataaatctagatatatatat-taacatcactatgaatgtgaaaaatgctagaatgactta 26
Query: 135 cattgtgaaacggaggaagtaa 156
|||| |||||||||||||||||
Sbjct: 25 cattatgaaacggaggaagtaa 4
Score = 115 bits (58), Expect = 2e-25
Identities = 122/142 (85%), Gaps = 1/142 (0%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||| ||||||||||||||||||||||||||||| |||| ||| ||||||| | || ||
Sbjct: 4 ttacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtt 63
Query: 74 aatgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactt 133
||| || || | | || ||| ||| |||| |||||||||||||||||||||||||||||
Sbjct: 64 aatatatatatctagatttat-taacatcactatgaatgtgggaaatactagaatgactt 122
Query: 134 acattgtgaaacggaggaagta 155
||||| |||||| |||| ||||
Sbjct: 123 acattatgaaacagagggagta 144
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 137 bits (69), Expect = 5e-32
Identities = 131/154 (85%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 75 atgaatctaaccatatatatct------------aatatcaatatgaatgtgggaaatac 122
|||||||||| ||||| ||| | || ||||||||||||||||||||| |
Sbjct: 97 atgaatctaaacatatgtatgtgctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 123 tagaatgacttacattgtgaaacggaggaagtaa 156
||||||||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagtaa 4
Score = 111 bits (56), Expect = 3e-24
Identities = 129/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| || ||
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 74 aatgaatctaac-catatatatct-----------aatatcaatatgaatgtgggaaata 121
|||||||||| | |||| |||| | || |||||||||||||||||||||
Sbjct: 64 aatgaatctagcacatacatatgtttagattcattaacatcaatatgaatgtgggaaatg 123
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||| ||||
Sbjct: 124 ctagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 137 bits (69), Expect = 5e-32
Identities = 123/141 (87%), Gaps = 5/141 (3%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||| ||||||||||||| |||| || ||||||||| || |||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| ||||| ||| || |||||||||||||||||| |||||||||||||
Sbjct: 80 atgaatctatacatat-----taacattaatatgaatgtgggaaatgctagaatgactta 26
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 119/141 (84%), Gaps = 5/141 (3%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| || |||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
|| || || || || ||| |||||||||||||||| |||| |||||||||||||
Sbjct: 65 at--atgtatagattcat---taacatcaatatgaatgtggaaaatgctagaatgactta 119
Query: 135 cattgtgaaacggaggaagta 155
||||||||||||||| ||||
Sbjct: 120 tattgtgaaacggagggagta 140
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 135 bits (68), Expect = 2e-31
Identities = 124/141 (87%), Gaps = 5/141 (3%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||||||||||||||||||||| ||||| |||||||||||| || |||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| || || ||| |||||||||||| |||||||| |||||||||||||
Sbjct: 80 atgaatcta--gattcat---taacatcaatatgaatatgggaaatgctagaatgactta 26
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||| ||||
Sbjct: 25 cattgtgaaacggagggagta 5
Score = 135 bits (68), Expect = 2e-31
Identities = 124/141 (87%), Gaps = 5/141 (3%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| ||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| || || ||| |||||||||||| |||||||| |||||||||||||
Sbjct: 65 atgaatcta--gattcat---taacatcaatatgaatatgggaaatgctagaatgactta 119
Query: 135 cattgtgaaacggaggaagta 155
|||| ||||||||||||||||
Sbjct: 120 cattatgaaacggaggaagta 140
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 133 bits (67), Expect = 9e-31
Identities = 126/144 (87%), Gaps = 5/144 (3%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| |||| |||||| ||||| ||||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 75 atgaatctaaccatatatat---ctaatatcaatatgaatgtgggaaatactagaatgac 131
||||||||| ||| || || ||| ||||||||||||||| ||||| ||||||||||
Sbjct: 86 atgaatcta--catctagattcattaacatcaatatgaatgtgagaaatgctagaatgac 29
Query: 132 ttacattgtgaaacggaggaagta 155
||||||||||||||||| ||||||
Sbjct: 28 ttacattgtgaaacggaagaagta 5
Score = 113 bits (57), Expect = 8e-25
Identities = 118/136 (86%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 22 tccgtttcataatgtaagtcattctagtatttctcatattcatattaatattaatgaatc 81
||||||||| ||||||||||||||||| |||||||| ||||||||| || ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 82 taaccatatat--atctaatatcaatatgaatgtgggaaatactagaatgacttacattg 139
|| || || || |||||||||||| ||| ||| |||| ||||||||||||||||||
Sbjct: 72 tagatgtagattcat-taatatcaatataaatatggaaaatgctagaatgacttacattg 130
Query: 140 tgaaacggaggaagta 155
||||||||||| ||||
Sbjct: 131 tgaaacggagggagta 146
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 133 bits (67), Expect = 9e-31
Identities = 127/145 (87%), Gaps = 4/145 (2%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 75 atgaatcta-accatatatatc---taatatcaatatgaatgtgggaaatactagaatga 130
||||||||| | | || || ||| ||||||||||||||||||||| |||||||||
Sbjct: 89 atgaatctagaatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatga 30
Query: 131 cttacattgtgaaacggaggaagta 155
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggaggaagta 5
Score = 125 bits (63), Expect = 2e-28
Identities = 126/145 (86%), Gaps = 4/145 (2%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 75 atgaatctaaccata-tatatc---taatatcaatatgaatgtgggaaatactagaatga 130
||||||||| ||| || || ||| ||||||||||||||||||||| |||||||||
Sbjct: 65 atgaatctagacattctagattcattaacatcaatatgaatgtgggaaatgctagaatga 124
Query: 131 cttacattgtgaaacggaggaagta 155
|||||||||||||||||||| ||||
Sbjct: 125 cttacattgtgaaacggagggagta 149
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 133 bits (67), Expect = 9e-31
Identities = 131/155 (84%), Gaps = 13/155 (8%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| ||
Sbjct: 159 ttactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtt 100
Query: 74 aatgaatctaaccatatatatc-------------taatatcaatatgaatgtgggaaat 120
|||||||||| |||||||||| ||| ||| |||||||| |||| |||
Sbjct: 99 aatgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaat 40
Query: 121 actagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 103 aatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
|||||||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 106 aatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagggagtaa 159
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 131 bits (66), Expect = 3e-30
Identities = 124/144 (86%), Gaps = 7/144 (4%)
Strand = Plus / Minus
Query: 12 tgttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaata 71
||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| ||
Sbjct: 141 tgttactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatg 82
Query: 72 ttaatgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgac 131
||||||||| | ||| || ||||||||||||||||||||| ||||||||||
Sbjct: 81 ctaatgaatcgattcat-------tagcatcaatatgaatgtgggaaatgctagaatgac 29
Query: 132 ttacattgtgaaacggaggaagta 155
||||||||||||||||||| ||||
Sbjct: 28 ttacattgtgaaacggagggagta 5
Score = 113 bits (57), Expect = 8e-25
Identities = 121/143 (84%), Gaps = 7/143 (4%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| ||||| || ||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||| | ||| || ||||||||||||||||||||| |||||||||||||
Sbjct: 65 atgaatcgattcat-------tagcatcaatatgaatgtgggaaatgctagaatgactta 117
Query: 135 cattgtgaaacggaggaagtaac 157
|||| ||||||||||| ||||||
Sbjct: 118 cattatgaaacggagggagtaac 140
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 131 bits (66), Expect = 3e-30
Identities = 124/142 (87%), Gaps = 1/142 (0%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| |||| || ||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 75 atgaatctaaccatatatatct-aatatcaatatgaatgtgggaaatactagaatgactt 133
||| ||||| ||| ||| | || ||||||||||||||||||||| ||||||||||||
Sbjct: 65 atgtatctagatatagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 124
Query: 134 acattgtgaaacggaggaagta 155
|||||||| |||||||||||||
Sbjct: 125 acattgtggaacggaggaagta 146
Score = 111 bits (56), Expect = 3e-24
Identities = 123/143 (86%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| |||||||| || ||||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 75 atgaatctaa--ccatatatatctaatatcaatatgaatgtgggaaatactagaatgact 132
||| ||||| | | ||| || ||| |||||||||||||||| |||| |||||||||||
Sbjct: 86 atgtatctatatctagatacat-taacatcaatatgaatgtggaaaatgctagaatgact 28
Query: 133 tacattgtgaaacggaggaagta 155
|||||||||||||||||| ||||
Sbjct: 27 tacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 130/154 (84%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| |||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 75 atgaatctaaccatatatatcta-------------atatcaatatgaatgtgggaaata 121
||||||||| ||||||||| || | |||||||||||||||||||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
Score = 83.8 bits (42), Expect = 7e-16
Identities = 124/154 (80%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 75 atgaatctaaccatatatat-------------ctaatatcaatatgaatgtgggaaata 121
||||||||| | |||||| ||| |||||||||||| ||| ||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 129 bits (65), Expect = 1e-29
Identities = 121/141 (85%), Gaps = 9/141 (6%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| ||| |||||||||||| || ||||||||||||| |||||
Sbjct: 76 atgaatcta---------gactagcatcaatatgaatatgagaaatactagaattactta 26
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 81 atcaatatgaatatgggaaatactagaatgacttacattatgaaacggagggagta 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||| ||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatatt 57
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 129 bits (65), Expect = 1e-29
Identities = 123/141 (87%), Gaps = 1/141 (0%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| |||||||| |||||||| ||||| || ||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
|||||| | | | || ||| || ||||||||||||||||||||| |||||||||||||
Sbjct: 65 atgaatttgtctagatttatg-aacatcaatatgaatgtgggaaatgctagaatgactta 123
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||||||||
Sbjct: 124 cattgtgaaacggaggaagta 144
Score = 113 bits (57), Expect = 8e-25
Identities = 121/141 (85%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| || ||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
|| |||||| || || || || ||||||||||||||||||||| |||||||| ||||
Sbjct: 84 ataaatctagacaaattcatg-aacatcaatatgaatgtgggaaatgctagaatggctta 26
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||| ||||
Sbjct: 25 cattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 127 bits (64), Expect = 5e-29
Identities = 125/143 (87%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||| |||||| ||||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 75 atgaatctaaccatatatatc--taatatcaatatgaatgtgggaaatactagaatgact 132
||||| ||| |||| || || ||| |||||||||||||||| |||| |||||||||||
Sbjct: 86 atgaaactagacatagat-tcattaacatcaatatgaatgtggaaaatgctagaatgact 28
Query: 133 tacattgtgaaacggaggaagta 155
|||||| ||||||||||||||||
Sbjct: 27 tacattatgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 122/142 (85%), Gaps = 1/142 (0%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||||||||||||||||||||| |||| || ||||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 75 atgaatctaaccata-tatatctaatatcaatatgaatgtgggaaatactagaatgactt 133
||||||||| || | | ||| ||||||||||||||||||||| ||||||||||||
Sbjct: 65 atgaatctatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaatgactt 124
Query: 134 acattgtgaaacggaggaagta 155
|||||||||||| |||| ||||
Sbjct: 125 acattgtgaaaccgagggagta 146
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 125 bits (63), Expect = 2e-28
Identities = 115/133 (86%), Gaps = 7/133 (5%)
Strand = Plus / Minus
Query: 18 tccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatattaatg 77
||||||||||||| ||||||||||||||||| |||||||| ||||||||| || | ||||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 78 aatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgacttacat 137
|||||| |||||| ||| |||||||||||| ||||| ||||||||||||||||
Sbjct: 75 aatctagacatatacatc-------aatatgaatgtgagaaatgctagaatgacttacat 23
Query: 138 tgtgaaacggagg 150
|||||||||||||
Sbjct: 22 tgtgaaacggagg 10
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 12 tgttactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
||||| ||||||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 2 tgttattccctccgtttcacaatgtaagtcattctagcatttctcacattcatatt 57
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 103 aatatgaatgtgggaaatactagaatgacttacattgtgaaacggagg 150
|||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 86 aatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 133
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 125 bits (63), Expect = 2e-28
Identities = 125/144 (86%), Gaps = 5/144 (3%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||| ||| |||| |||||| ||||| ||||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 75 atgaatctaaccatatatatc---taatatcaatatgaatgtgggaaatactagaatgac 131
||||||||| ||| || || ||| ||||||||||||||| ||||| ||||||||||
Sbjct: 86 atgaatcta--catctagattcattaacatcaatatgaatgtgagaaatgctagaatgac 29
Query: 132 ttacattgtgaaacggaggaagta 155
||||||||||||||||| ||||||
Sbjct: 28 ttacattgtgaaacggaagaagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 117/136 (86%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 22 tccgtttcataatgtaagtcattctagtatttctcatattcatattaatattaatgaatc 81
||||||||| ||||||||||||||||| |||||||| ||||||||| || ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 82 taaccatatat--atctaatatcaatatgaatgtgggaaatactagaatgacttacattg 139
|| || || || |||||||||||| ||| ||| |||| ||| ||||||||||||||
Sbjct: 72 tagatgtagattcat-taatatcaatataaatatggaaaatgctataatgacttacattg 130
Query: 140 tgaaacggaggaagta 155
||||||||||| ||||
Sbjct: 131 tgaaacggagggagta 146
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 130/155 (83%), Gaps = 13/155 (8%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| |||||||||||||||| ||||| || ||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 75 atgaatctaaccatatatatc-------------taatatcaatatgaatgtgggaaata 121
||||||||| |||||||||| ||| ||||||||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 122 ctagaatgacttacattgtgaaacggaggaagtaa 156
||||||||||||||||||||||||||||| |||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtaa 159
Score = 117 bits (59), Expect = 5e-26
Identities = 129/155 (83%), Gaps = 13/155 (8%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||||||||||||||| |||||||||||||||||||||| ||| ||||||||| || ||
Sbjct: 159 ttactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttt 100
Query: 74 aatgaatctaaccatatatat-------------ctaatatcaatatgaatgtgggaaat 120
|||||||||| | |||||| |||||||||||||||||||||||||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 40
Query: 121 actagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||||||||||||| ||||
Sbjct: 39 gttagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 123 bits (62), Expect = 8e-28
Identities = 68/70 (97%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 75 atgaatctaa 84
||||||||||
Sbjct: 66 atgaatctaa 57
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 96 taatatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||| || ||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 67 taatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtattt 53
|||| ||||||||||| ||| ||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattt 43
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 123 bits (62), Expect = 8e-28
Identities = 123/143 (86%), Gaps = 9/143 (6%)
Strand = Plus / Plus
Query: 13 gttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatat 72
|||||||||||||||||| ||||||||||||||||| ||||| || ||| ||||| ||||
Sbjct: 3 gttactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatat 62
Query: 73 taatgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgact 132
|||| ||| || ||| |||||||||||||||||||||||| |||||||||||
Sbjct: 63 taataaatttag------ata---aatatcaatatgaatgtgggaaatgctagaatgact 113
Query: 133 tacattgtgaaacggaggaagta 155
|| ||||||||||||||||||||
Sbjct: 114 tatattgtgaaacggaggaagta 136
Score = 105 bits (53), Expect = 2e-22
Identities = 122/143 (85%), Gaps = 9/143 (6%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||| ||||||||||||| ||||| || ||||||||| |||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgatattt 77
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
|| |||| || ||| |||||||||||| |||||||||||| |||||||||||||
Sbjct: 76 at----ctaa----atttat-taatatcaatataaatgtgggaaatgctagaatgactta 26
Query: 135 cattgtgaaacggaggaagtaac 157
|||||||||||||||| ||||||
Sbjct: 25 cattgtgaaacggagggagtaac 3
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 123 bits (62), Expect = 8e-28
Identities = 120/141 (85%), Gaps = 10/141 (7%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| ||||||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| ||||||| |||||||||||||||||| |||||||||||||
Sbjct: 75 atgaatctagacatatat----------aatatgaatgtgggaaatgctagaatgactta 26
Query: 135 cattgtgaaacggaggaagta 155
|||||||||| ||||| ||||
Sbjct: 25 cattgtgaaatggagggagta 5
Score = 103 bits (52), Expect = 8e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 96 taatatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 76 taatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 135
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 123 bits (62), Expect = 8e-28
Identities = 125/144 (86%), Gaps = 4/144 (2%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||| |||||||||||| ||||||||| || |||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 75 atgaatcta---accatatatatctaatatcaatatgaatgtgggaaatactagaatgac 131
||||||||| | ||| |||| ||| |||||||| |||||| |||||||| ||||||
Sbjct: 87 atgaatctagacaacattaatat-taacatcaatataaatgtgacaaatactaaaatgac 29
Query: 132 ttacattgtgaaacggaggaagta 155
|||||||||||||| |||| ||||
Sbjct: 28 ttacattgtgaaacagagggagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 92 atcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacggagggagta 147
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 123 bits (62), Expect = 8e-28
Identities = 122/141 (86%), Gaps = 7/141 (4%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| |||| ||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| |||| ||| |||||||||||||| ||||||| ||||||||||||
Sbjct: 65 atgaatctag------atat-taacatcaatatgaatgtaggaaatagtagaatgactta 117
Query: 135 cattgtgaaacggaggaagta 155
||||||||||||||||||||
Sbjct: 118 tattgtgaaacggaggaagta 138
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| | | |||| ||||||||||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatatagaaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 123 bits (62), Expect = 8e-28
Identities = 129/154 (83%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||||||||| || ||||||||| | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 75 atgaatctaaccatatatatc-------------taatatcaatatgaatgtgggaaata 121
||||||||| |||||||||| ||| ||||||||| |||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 53/54 (98%)
Strand = Plus / Plus
Query: 102 caatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 105 caatatgaatgtgggaaatactagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 121 bits (61), Expect = 3e-27
Identities = 119/141 (84%), Gaps = 13/141 (9%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||| ||||||||||||| ||||| || |||||||||||| ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 72 atgaatctag-------------atatcaatatgaatgtgggaaatgctagaatgactta 26
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 103 aatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 80 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatat 72
|||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 62
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 121 bits (61), Expect = 3e-27
Identities = 121/141 (85%), Gaps = 5/141 (3%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| ||||||| | ||||||||| |||| |||| |||||||||||||
Sbjct: 65 atgaatctagacatatat-----acatcaatatgtatgtacaaaatgctagaatgactta 119
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||||||||
Sbjct: 120 cattgtgaaacggaggaagta 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggtagta 5
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 121 bits (61), Expect = 3e-27
Identities = 119/141 (84%), Gaps = 13/141 (9%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||| ||||||||||||| ||||| || |||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 65 atgaatctag-------------atatcaatatgaatgtgggaaatgctagaatgactta 111
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||||||||
Sbjct: 112 cattgtgaaacggaggaagta 132
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 103 aatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatat 72
|||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| ||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 75
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 121 bits (61), Expect = 3e-27
Identities = 122/142 (85%), Gaps = 9/142 (6%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||||||||||||||| |||||||||||||||| ||||| || ||||||||| || ||
Sbjct: 137 ttactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 78
Query: 74 aatgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactt 133
|||||||||| ||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 77 aatgaatctag------atag---atatcaatatgaatatgggaaatgctagaatgactt 27
Query: 134 acattgtgaaacggaggaagta 155
||||||||||||||||||||||
Sbjct: 26 acattgtgaaacggaggaagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 119/142 (83%), Gaps = 9/142 (6%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatat-- 62
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||| | | || || ||| ||||||||||||||||||||| ||||||||||||
Sbjct: 63 ------ctatctagattcat-taacatcaatatgaatgtgggaaatgttagaatgactta 115
Query: 135 cattgtgaaacggaggaagtaa 156
|||||||||||||||| |||||
Sbjct: 116 cattgtgaaacggagggagtaa 137
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 130/156 (83%), Gaps = 13/156 (8%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| ||||| || ||||||| | || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 75 atgaatctaaccatatatatc-------------taatatcaatatgaatgtgggaaata 121
||||||||| |||||||||| |||||||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggaggaagtaac 157
|||||||||||||||||||||||||||| ||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagtaac 160
Score = 105 bits (53), Expect = 2e-22
Identities = 129/157 (82%), Gaps = 13/157 (8%)
Strand = Plus / Minus
Query: 12 tgttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaata 71
||||||||||||||||||| |||||||||||||||| |||| || ||||||||| |||
Sbjct: 161 tgttactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgata 102
Query: 72 ttaatgaatctaaccatatatat-------------ctaatatcaatatgaatgtgggaa 118
||||||||||||| | |||||| ||| |||| ||||||||||||||
Sbjct: 101 ttaatgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaa 42
Query: 119 atactagaatgacttacattgtgaaacggaggaagta 155
|| ||||||||||||||||||||||||||||| ||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 117 bits (59), Expect = 5e-26
Identities = 125/145 (86%), Gaps = 4/145 (2%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||| |||||| ||||||||||||||||| |||||||| ||||||||| || |||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 75 atgaatctaac-catatatatc---taatatcaatatgaatgtgggaaatactagaatga 130
||||| ||| || ||| || ||| |||||||||||||||| |||| |||||||||
Sbjct: 89 atgaaactatgtcacatagattcattaacatcaatatgaatgtggaaaatgctagaatga 30
Query: 131 cttacattgtgaaacggaggaagta 155
|||||||| ||||||||||||||||
Sbjct: 29 cttacattatgaaacggaggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 123/145 (84%), Gaps = 4/145 (2%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||||||||||||||||||||| |||| || ||||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 75 atgaatcta---accata-tatatctaatatcaatatgaatgtgggaaatactagaatga 130
||||||||| |||| | | ||| ||||||||||||||| ||||| |||||||||
Sbjct: 65 atgaatctatgtgacatagtttcattaacatcaatatgaatgtgagaaatgctagaatga 124
Query: 131 cttacattgtgaaacggaggaagta 155
||||||||||||||| |||| ||||
Sbjct: 125 cttacattgtgaaaccgagggagta 149
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 117 bits (59), Expect = 5e-26
Identities = 126/147 (85%), Gaps = 6/147 (4%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||| |||||||||||| |||||| || ||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 75 atgaatctaaccatatata----tc--taatatcaatatgaatgtgggaaatactagaat 128
||||| ||| ||| || || ||| |||||||| ||||||||||||||||||||
Sbjct: 65 atgaaactacatctatttaagtttcattaacatcaatataaatgtgggaaatactagaat 124
Query: 129 gacttacattgtgaaacggaggaagta 155
|||||||||||||||||||||||||||
Sbjct: 125 gacttacattgtgaaacggaggaagta 151
Score = 99.6 bits (50), Expect = 1e-20
Identities = 125/147 (85%), Gaps = 6/147 (4%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||||||||| || ||| ||||| || |||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 75 atgaatct-aaccatatata---tc--taatatcaatatgaatgtgggaaatactagaat 128
||||| || || | || || || ||| |||||||||||||||||||||| ||||||
Sbjct: 91 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 32
Query: 129 gacttacattgtgaaacggaggaagta 155
|||||| ||||||||||||||| ||||
Sbjct: 31 gacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 129/155 (83%), Gaps = 13/155 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| |||||||||||||||| |||||| || ||||||||| || |||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 75 atgaatctaaccatatatatcta-------------atatcaatatgaatgtgggaaata 121
|||||| || |||||||||||| | |||||||||||||||||||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagtaa 156
||||||||||||||||||||||||||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtaa 4
Score = 117 bits (59), Expect = 5e-26
Identities = 129/155 (83%), Gaps = 13/155 (8%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||||||||||||||| ||||||||||||||||| ||||| || ||||||||| || ||
Sbjct: 4 ttactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 74 aatgaatctaaccatatatatct-------------aatatcaatatgaatgtgggaaat 120
|||||||||| | |||||| | || |||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaat 123
Query: 121 actagaatgacttacattgtgaaacggaggaagta 155
| |||||||||||||||||||||||||||||||||
Sbjct: 124 attagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 128/154 (83%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||| ||| |||||||| || |||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 75 atgaatctaaccatatatatc-------------taatatcaatatgaatgtgggaaata 121
||||||||| |||||||||| |||||| | ||||||||||||||||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| || ||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 115 bits (58), Expect = 2e-25
Identities = 122/143 (85%), Gaps = 9/143 (6%)
Strand = Plus / Plus
Query: 13 gttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatat 72
|||||||||||||||||| ||||||||||||||||| |||| || ||| ||||| ||||
Sbjct: 3 gttactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatat 62
Query: 73 taatgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgact 132
|||| ||| || ||| |||||||||||||||||||||||| |||||||||||
Sbjct: 63 taataaatttag------ata---aatatcaatatgaatgtgggaaatgctagaatgact 113
Query: 133 tacattgtgaaacggaggaagta 155
|| ||||||||||||||||||||
Sbjct: 114 tatattgtgaaacggaggaagta 136
Score = 97.6 bits (49), Expect = 5e-20
Identities = 121/143 (84%), Gaps = 9/143 (6%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||| ||||||||||||| ||||| || ||||||||| |||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgatattt 77
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
|| |||| || ||| |||||||||||| ||||||| |||| |||||||||||||
Sbjct: 76 at----ctaa----atttat-taatatcaatataaatgtggaaaatgctagaatgactta 26
Query: 135 cattgtgaaacggaggaagtaac 157
|||||||||||||||| ||||||
Sbjct: 25 cattgtgaaacggagggagtaac 3
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 115 bits (58), Expect = 2e-25
Identities = 125/148 (84%), Gaps = 7/148 (4%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||||||||||||||||| ||||| || ||||||||| || | |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 75 atgaatctaaccatatatatctaat-------atcaatatgaatgtgggaaatactagaa 127
||||||||| || || | | | | ||||||||||||||||||||| |||||
Sbjct: 92 atgaatctagacagatgtctagattcattgacatcaatatgaatgtgggaaatgatagaa 33
Query: 128 tgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 97 atcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 152
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 115 bits (58), Expect = 2e-25
Identities = 125/148 (84%), Gaps = 7/148 (4%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||| ||||||||||||| ||||| | ||||||||| || ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 75 atgaatctaaccatatatatctaat-------atcaatatgaatgtgggaaatactagaa 127
||||||||| ||||||| | | | ||||||||||||||||||||| ||||||
Sbjct: 92 atgaatctagacatatatctagattcattagcatcaatatgaatgtgggaaatgctagaa 33
Query: 128 tgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggaggaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 125/150 (83%), Gaps = 11/150 (7%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 75 atgaatctaaccatatatatcta-----at----atcaatatgaatgtgggaaatactag 125
||||||||| |||||| |||| || |||||||||||||| |||||| ||||
Sbjct: 65 atgaatctag--atatatgtctagattcattagcatcaatatgaatgtaggaaatgctag 122
Query: 126 aatgacttacattgtgaaacggaggaagta 155
||||||||| ||||||||||||||| ||||
Sbjct: 123 aatgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 113 bits (57), Expect = 8e-25
Identities = 129/153 (84%), Gaps = 10/153 (6%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||||||||||||||||||||||||| | ||||| || ||||||||| || |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 75 atgaatcta-accatatatatctaa---------tatcaatatgaatgtgggaaatacta 124
||| ||||| || |||| |||||| ||||||||||||||||||||||||||
Sbjct: 95 atggatctagactatatctatctagattcattagtatcaatatgaatgtgggaaatacta 36
Query: 125 gaatgacttacattgtgaaacggaggaagtaac 157
|||||||||| ||||||||||||||||||||||
Sbjct: 35 gaatgacttatattgtgaaacggaggaagtaac 3
Score = 89.7 bits (45), Expect = 1e-17
Identities = 128/154 (83%), Gaps = 10/154 (6%)
Strand = Plus / Plus
Query: 12 tgttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaata 71
||||||| ||||||||||| ||| ||||||||||||||||||| || ||||||||| |||
Sbjct: 2 tgttacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgata 61
Query: 72 ttaatgaatctaaccatatata-tcta-at--------atcaatatgaatgtgggaaata 121
||||||||||| | ||||| |||| || |||||||||||||||||||||
Sbjct: 62 ctaatgaatctagatagatatagtctagatccattggcatcaatatgaatgtgggaaatg 121
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
| |||||||||||||| ||||||||||| ||||
Sbjct: 122 gtggaatgacttacattatgaaacggagggagta 155
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 111 bits (56), Expect = 3e-24
Identities = 122/141 (86%), Gaps = 6/141 (4%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| ||||| |||||||||||| || |||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| || | || || || || |||||| |||||||| |||||||||||||
Sbjct: 79 atgaatctagaca-agat-tc----attaacatgaatatgggaaatgctagaatgactta 26
Query: 135 cattgtgaaacggaggaagta 155
|||| ||||||||||||||||
Sbjct: 25 cattatgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 120/142 (84%), Gaps = 8/142 (5%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||||||||||||||||||||| ||||| ||||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatgttaat---- 60
Query: 75 atgaatctaacc-atatatatctaatatcaatatgaatgtgggaaatactagaatgactt 133
|||||| | | || || ||| |||||||||||| |||||||| ||||||||||||
Sbjct: 61 --gaatcttgtctagattcat-taacatcaatatgaatatgggaaatgctagaatgactt 117
Query: 134 acattgtgaaacggaggaagta 155
||||||||||||||||| ||||
Sbjct: 118 acattgtgaaacggagggagta 139
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 111 bits (56), Expect = 3e-24
Identities = 121/142 (85%), Gaps = 8/142 (5%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| || |
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggt 63
Query: 74 aatgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactt 133
||||||||| | ||| ||| ||||||||||||||||||||| ||||||||||||
Sbjct: 64 aatgaatct-------tttat-taacatcaatatgaatgtgggaaatgctagaatgactt 115
Query: 134 acattgtgaaacggaggaagta 155
|| |||||||||||||| ||||
Sbjct: 116 actttgtgaaacggagggagta 137
Score = 105 bits (53), Expect = 2e-22
Identities = 56/57 (98%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 130/154 (84%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| |||||||||||||||| ||||| || ||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 75 atgaatctaaccatatatatcta-ata---tca---------atatgaatgtgggaaata 121
||||||||| |||||||||||| || ||| ||||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 96 taatatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 64 taatatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 111 bits (56), Expect = 3e-24
Identities = 122/141 (86%), Gaps = 6/141 (4%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| ||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| || | || || || || |||||| |||||||| |||||||||||||
Sbjct: 65 atgaatctagaca-agat-tc----attaacatgaatatgggaaatgctagaatgactta 118
Query: 135 cattgtgaaacggaggaagta 155
|||| ||||||||||||||||
Sbjct: 119 cattatgaaacggaggaagta 139
Score = 93.7 bits (47), Expect = 7e-19
Identities = 120/142 (84%), Gaps = 8/142 (5%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||||||||||||||||||||| ||||| ||||||||| |||||
Sbjct: 139 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatgttaat---- 84
Query: 75 atgaatctaacc-atatatatctaatatcaatatgaatgtgggaaatactagaatgactt 133
|||||| | | || || ||| |||||||||||| |||||||| ||||||||||||
Sbjct: 83 --gaatcttgtctagattcat-taacatcaatatgaatatgggaaatgctagaatgactt 27
Query: 134 acattgtgaaacggaggaagta 155
||||||||||||||||| ||||
Sbjct: 26 acattgtgaaacggagggagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 76/83 (91%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| |||||||| |||||||||||||| || ||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 75 atgaatctaaccatatatatcta 97
||||||||| ||||||||||||
Sbjct: 98 atgaatctagacatatatatcta 76
Score = 103 bits (52), Expect = 8e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 96 taatatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 99 taatatcaatatgaatgtgggaaatactagaatgtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 107 bits (54), Expect = 5e-23
Identities = 119/141 (84%), Gaps = 6/141 (4%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||| ||||||||||||| ||||||| || ||||| | | |||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtta 80
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| |||||| ||| | ||||||||||| ||||||||||||||||||
Sbjct: 79 atgaatctagacatata------ataactctatgaatgtggaaaatactagaatgactta 26
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 116 gaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 100 gaaatcctagaatgacttatattgtgaaacggaggaagta 139
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtattt 53
|||| ||||||||||| ||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattt 43
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 127/154 (82%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 75 atgaatctaaccatatatat-------------ctaatatcaatatgaatgtgggaaata 121
||||||||| ||||||||| |||||| ||||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||| ||||||||||||||||||||||||| ||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 127/154 (82%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||| ||| |||| || ||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 75 atgaat----ctaaccatatatatcta---------atatcaatatgaatgtgggaaata 121
|| ||| |||| |||||| |||| | |||||||||||||||||||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 107 bits (54), Expect = 5e-23
Identities = 128/154 (83%), Gaps = 14/154 (9%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| |||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 75 atgaatctaaccatatatatc-------------taatatcaatatgaatgtgggaaata 121
||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa-a 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||| ||||||||||| ||||||||| ||||
Sbjct: 38 ctagaataacttacattgtaaaacggagggagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||
Sbjct: 102 atcaatatgaatgtggaaaatattagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 107 bits (54), Expect = 5e-23
Identities = 124/145 (85%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| |||||||||||||||||||||| ||||||| ||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 75 atgaatct--aaccatatatatctaatatcaatatgaatgtgggaaatactagaatgact 132
|||||||| | | | || || || |||||||||||||| | |||| ||||||||| |
Sbjct: 65 atgaatctagatctaaattcat-tagcatcaatatgaatgtagaaaatgctagaatgatt 123
Query: 133 tacattgtgaaacggaggaagtaac 157
|||||||||||||||||| ||||||
Sbjct: 124 tacattgtgaaacggagggagtaac 148
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| ||| || |||||||||||||||||||||||||||||||||| ||||
Sbjct: 60 atcaatataaatatgaaaaatactagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 107 bits (54), Expect = 5e-23
Identities = 129/153 (84%), Gaps = 12/153 (7%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| |||||||||||||||| ||||| |||||| |||||||| |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 75 atgaatctaaccatata---tatcta-at--------atcaatatgaatgtgggaaatac 122
||||||||| ||||| |||||| || ||||||||||||||| ||||| |
Sbjct: 97 atgaatctagatatatattctatctagattcattaccatcaatatgaatgtgagaaatgc 38
Query: 123 tagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||| |||||||||||||||
Sbjct: 37 tagaatgacttacattgcgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 124/153 (81%), Gaps = 12/153 (7%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| |||||||||| ||||||||||||||||| |||||||| ||||||||| || ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 75 atgaatcta---accatatatatc---------taatatcaatatgaatgtgggaaatac 122
||||||||| | ||||||||| ||| || ||||| ||| ||||||||
Sbjct: 65 atgaatctagatagaatatatatctagattcattaacattaatataaatatgggaaatgt 124
Query: 123 tagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||||||||||||| ||||
Sbjct: 125 tagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 107 bits (54), Expect = 5e-23
Identities = 122/144 (84%), Gaps = 8/144 (5%)
Strand = Plus / Plus
Query: 12 tgttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaata 71
||||| ||||||||||||| ||| ||||||||||||| ||||||||||| ||||| |||
Sbjct: 2 tgttattccctccgtttcacaatataagtcattctagcatttctcatatagatattgata 61
Query: 72 ttaatgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgac 131
|||||||||||| |||| ||| ||||| ||||||||| |||| ||| ||||||
Sbjct: 62 ttaatgaatcta--cata------taacatcaacatgaatgtgaaaaatgctaaaatgac 113
Query: 132 ttacattgtgaaacggaggaagta 155
||| ||||||||||||||||||||
Sbjct: 114 ttatattgtgaaacggaggaagta 137
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 96 taatatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggagg 150
|||||||||||| || || ||||| ||||||||||||| |||||||||||||||
Sbjct: 64 taatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacggagg 10
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcat 64
|||| ||||||||||| ||| ||||||||| ||| |||| ||| ||||||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttttcacattcat 88
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 107 bits (54), Expect = 5e-23
Identities = 126/152 (82%), Gaps = 11/152 (7%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||||||| || ||||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 75 atgaatctaaccatatatat-----------ctaatatcaatatgaatgtgggaaatact 123
||||||||| ||||||||| ||| |||||||||||||| | |||| ||
Sbjct: 96 atgaatctagacatatatatgtctacattcattaacatcaatatgaatgtagaaaatgct 37
Query: 124 agaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||| |||||||||||||
Sbjct: 36 agaatgacttacattgtggaacggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 101 atcaatatgaatgtgggaaatgctagaatgacttacattgtggaacggagggagta 156
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 127/154 (82%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| ||| || |||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 75 atgaatctaaccatatatatc-------------taatatcaatatgaatgtgggaaata 121
||||||||| |||||||||| ||| | ||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||| ||||||||||||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||| ||| ||||| || |||||||||| | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 103 aatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| ||||||||||||||||||||||||||||| ||||
Sbjct: 106 aatatgaatgtggagaatgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 105 bits (53), Expect = 2e-22
Identities = 122/143 (85%), Gaps = 4/143 (2%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||| ||||||||||| ||||||||||||| ||| ||||| || ||||||||| || |
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgct 63
Query: 74 aatgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactaga-atgact 132
|||||||||| | ||| || || ||||||||||||||||||||| ||| | ||||||
Sbjct: 64 aatgaatctagctatacat---tagcatcaatatgaatgtgggaaatgctaaacatgact 120
Query: 133 tacattgtgaaacggaggaagta 155
|||||||||||||||||| ||||
Sbjct: 121 tacattgtgaaacggagggagta 143
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 105 bits (53), Expect = 2e-22
Identities = 122/143 (85%), Gaps = 4/143 (2%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||| ||||||||||| ||||||||||||| ||| ||||| || ||||||||| || |
Sbjct: 144 ttacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgct 85
Query: 74 aatgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactaga-atgact 132
|||||||||| | ||| || || ||||||||||||||||||||| ||| | ||||||
Sbjct: 84 aatgaatctagctatacat---tagcatcaatatgaatgtgggaaatgctaaacatgact 28
Query: 133 tacattgtgaaacggaggaagta 155
|||||||||||||||||| ||||
Sbjct: 27 tacattgtgaaacggagggagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 88 atcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtaa 144
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| |||||||||||||||||||||||||||||||||||||| ||||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatactagaatgacttacattatgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||||||||| ||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 105 bits (53), Expect = 2e-22
Identities = 127/147 (86%), Gaps = 6/147 (4%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||||||||||||||| ||| ||||||||| ||| ||||| |||||||||||| || ||
Sbjct: 150 ttactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtt 91
Query: 74 aatgaatctaaccatata--tatcta-at--atcaatatgaatgtgggaaatactagaat 128
|||||||||| |||||| |||||| || || || || |||||||||||| ||||||
Sbjct: 90 aatgaatctagacatatatctatctagattcattaacatcaatgtgggaaatgctagaa- 32
Query: 129 gacttacattgtgaaacggaggaagta 155
||||||||||||||||| |||||||||
Sbjct: 31 gacttacattgtgaaacagaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
|||||||||||| |||||||| ||| ||||||||| ||||||||||||||| |||||
Sbjct: 94 atcaatatgaatatgggaaatgctaaaatgacttatattgtgaaacggagggagtaa 150
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 105 bits (53), Expect = 2e-22
Identities = 118/141 (83%), Gaps = 9/141 (6%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| |||| |||||||| ||| ||||| |||||||||||| || |||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
|| |||||| ||| |||| ||| |||||||||||||||||||||| |||||
Sbjct: 76 ataaatctagacatttata---------aatgtgaatgtgggaaatactagaataactta 26
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| |||||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 81 atcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacggaggaagta 136
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 103 bits (52), Expect = 8e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 98 atatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaac 157
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 80 atatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtaac 139
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 12 tgttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaata 71
||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||| |||
Sbjct: 140 tgttacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgata 81
Query: 72 t 72
|
Sbjct: 80 t 80
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 103 bits (52), Expect = 8e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 96 taatatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 67 taatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||| ||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| | ||||||||| ||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 75 atgaat 80
||||||
Sbjct: 66 atgaat 61
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 103 bits (52), Expect = 8e-22
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 117/141 (82%), Gaps = 10/141 (7%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| || | |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| || | ||||||||||||||||||||| |||||||||||||
Sbjct: 65 atgaatctagaca----------acatcaatatgaatgtgggaaatgctagaatgactta 114
Query: 135 cattgtgaaacggaggaagta 155
|||| ||||||||||| ||||
Sbjct: 115 cattatgaaacggagggagta 135
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 103 bits (52), Expect = 8e-22
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagt 40
|||||||||||||||| |||||||||
Sbjct: 107 tactccctccgtttcacaatgtaagt 82
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 130 acttacattgtgaaacggaggaagta 155
||||||||||||||||||||| ||||
Sbjct: 82 acttacattgtgaaacggagggagta 107
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 103 bits (52), Expect = 8e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 96 taatatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 56 taatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagta 115
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||||||||||||||||||||| ||||| || ||||||||| ||||||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 75 atgaatcta 83
|||||||||
Sbjct: 55 atgaatcta 47
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 101 bits (51), Expect = 3e-21
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| |||||||||||||| || ||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 75 atgaatctaaccatatatatcta 97
||||||||| ||||||||||||
Sbjct: 65 atgaatctagacatatatatcta 87
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| |||||||| || |||||||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttc 54
|||||||||||||||| ||||||||||||||||| |||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttc 117
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 54/55 (98%)
Strand = Plus / Minus
Query: 101 tcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| |||||||||||| ||| ||||||||| ||||||||||||||| ||||
Sbjct: 103 atcaatattaatgtgggaaattctaaaatgacttagattgtgaaacggagggagta 158
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 101 bits (51), Expect = 3e-21
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| |||||||||||||| || ||||| |||||||||||| || |||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 75 atgaatctaaccatatatatcta 97
||||||||| ||||||||||||
Sbjct: 96 atgaatctagacatatatatcta 74
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| |||||||| || |||||||||||||||||||||||||| ||||
Sbjct: 101 atcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggagggagta 156
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttc 54
|||||||||||||||| ||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 101 bits (51), Expect = 3e-21
Identities = 118/142 (83%), Gaps = 10/142 (7%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||| |||||||||||| ||||| || ||||||||| || |||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| ||| |||||||||||||||| |||| |||||||||||||
Sbjct: 75 atgaatctaga----------taacatcaatatgaatgtggaaaatgctagaatgactta 26
Query: 135 cattgtgaaacggaggaagtaa 156
|||||||||||||||||||||
Sbjct: 25 tattgtgaaacggaggaagtaa 4
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 80 atcaatatgaatgtgggaaatgttagaatgacttatattgtgaaacggagggagta 135
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 99.6 bits (50), Expect = 1e-20
Identities = 118/141 (83%), Gaps = 6/141 (4%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||| ||| |||||||||||| ||||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| |||| || |||||||||||||||| |||| ||| |||||||||
Sbjct: 65 atgaatctagacata------tagcatcaatatgaatgtggaaaatgctaaaatgactta 118
Query: 135 cattgtgaaacggaggaagta 155
||||||||||||||| ||||
Sbjct: 119 tattgtgaaacggagggagta 139
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| ||| || ||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 60 atcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||||||||||||||| ||| ||||||||| ||| |||| || |||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatatt 87
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 126/154 (81%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||| | | ||||| || ||| ||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 75 atgaatctaaccatatatatcta-------------atatcaatatgaatgtgggaaata 121
||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| ||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgatacggagggagta 158
Score = 91.7 bits (46), Expect = 3e-18
Identities = 125/154 (81%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||| ||| ||||||||||||||||| ||||| || ||||||||| ||||||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 75 atgaatctaaccatatatat-------------ctaatatcaatatgaatgtgggaaata 121
||||||||| | |||||| ||| |||||||| ||||||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
| | ||||||||||||||||||||||||||||||
Sbjct: 38 caaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 99.6 bits (50), Expect = 1e-20
Identities = 125/152 (82%), Gaps = 11/152 (7%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||||||||||||||| |||||||| ||| |||| ||| |||||||| || |||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 75 atgaatctaaccatatatatct-----------aatatcaatatgaatgtgggaaatact 123
||||||||| ||||||||| | || ||| | ||||||||||||||| ||
Sbjct: 96 atgaatctatgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatgct 37
Query: 124 agaatgacttacattgtgaaacggaggaagta 155
| ||||||||||||||||||||||||||||||
Sbjct: 36 aaaatgacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||| ||| ||||| || |||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 75 atgaatctaaccatatatat 94
||||||| | |||||||||
Sbjct: 65 atgaatcaagacatatatat 84
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||| |||| ||| |||||||| |||| ||||||||||| ||||
Sbjct: 105 atatgaatgtgaaaaatgctaaaatgacttgcattatgaaacggagggagta 156
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 126/154 (81%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||| |||||||||||||||||||||||| | ||||| || ||||||||| || ||
Sbjct: 158 tactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatggta 99
Query: 75 atgaatctaaccatatatatcta-------------atatcaatatgaatgtgggaaata 121
||||||||| |||||||||||| | | |||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| ||||| || ||||||||| | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacgga 148
||||||||||||||||||||| | |||||||||||||| |||||||||
Sbjct: 103 atcaatatgaatgtgggaaatggtggaatgacttacattatgaaacgga 151
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 126/154 (81%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||| ||||||||||||| |||| ||||||||||| || ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 75 atgaatctaaccatatatatcta-------------atatcaatatgaatgtgggaaata 121
||||||||| |||||||||||| | ||||||| |||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| | | |||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 103 atcaatatgaatatagaaaatgctagaatgacttatattgtgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| |||| || |||| |||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 75 atgaatcta 83
|||| ||||
Sbjct: 65 atgactcta 73
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 99.6 bits (50), Expect = 1e-20
Identities = 53/54 (98%)
Strand = Plus / Plus
Query: 103 aatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
|||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagtaa 110
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaa 69
||||| ||||||||||| ||||||||||||| ||||||||| || |||||||||||
Sbjct: 110 ttacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatattaa 55
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcatt 44
|||||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 126/154 (81%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| |||||||||||||||| |||| || ||||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 75 atgaatctaaccatatatatctaa-------------tatcaatatgaatgtgggaaata 121
||||||||| |||||||||||| |||||||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||| ||||||||||||| |||||||| ||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct: 103 atcaatatgaatgtggtaaatgttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 126/154 (81%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||| ||| ||| | || ||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 75 atgaatctaaccatatatatc-------------taatatcaatatgaatgtgggaaata 121
||||||||| |||||||||| ||| || ||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||| ||||||||| ||||||||||||||||||||
Sbjct: 125 ctaaaatgacttatattgtgaaacggaggaagta 158
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggtaatgctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 127/154 (82%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||||||| || ||| |||||||||||| |||||||||||||||||| || ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 75 atgaatctaaccatatatatct-----aat--------atcaatatgaatgtgggaaata 121
|||||||||| ||||||||||| ||| |||||||||||| ||| |||||
Sbjct: 98 atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| | |||| |||||||||||||
Sbjct: 38 ctagaatgacttatactgtggaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| || ||||| |||||||||||| |||||| |||||||| ||||
Sbjct: 103 atcaatatgaatatgagaaatgttagaatgacttatattgtggaacggagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| |||||||| || | | |||||||||||||||||| |||||||||||| || ||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 75 atgaat 80
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 97.6 bits (49), Expect = 5e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 103 aatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 85.7 bits (43), Expect = 2e-16
Identities = 114/141 (80%), Gaps = 15/141 (10%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| || |||||||||| || ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtacta 71
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| ||| ||||||||||| ||||| ||||||| |||||
Sbjct: 70 atgaatctagacat---------------atatgaatgtgagaaatgctagaataactta 26
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
|||| ||||||||||| ||||||||| ||||||| |||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 97.6 bits (49), Expect = 5e-20
Identities = 117/141 (82%), Gaps = 9/141 (6%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||||||||||||||||||||||||||| |||| | ||||| ||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| || ||||| |||||||||| | ||| |||||||||||||
Sbjct: 65 atgaatcta---------gacttatatctatatgaatgtagacaatgctagaatgactta 115
Query: 135 cattgtgaaacggaggaagta 155
|||| ||||||||||||||||
Sbjct: 116 cattatgaaacggaggaagta 136
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 96 taatatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||| ||||| || |||| |||| |||||||||||||||| ||||||||||| ||||
Sbjct: 64 taatatctatatgcatatgggcaatattagaatgacttacattatgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||| |||||||||||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctag 103
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 97.6 bits (49), Expect = 5e-20
Identities = 118/141 (83%), Gaps = 10/141 (7%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||| ||||||||||||| ||||| || ||||| ||| ||||||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
|||||||| ||| |||||||||| |||||||| ||||| |||||||||||||
Sbjct: 75 atgaatct---cat-------taatatcaatgtgaatgtgtgaaatgctagaatgactta 26
Query: 135 cattgtgaaacggaggaagta 155
||||||||||||||| ||||
Sbjct: 25 tattgtgaaacggagggagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 118/141 (83%), Gaps = 10/141 (7%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||| ||||||||||||| ||||| || ||||| ||| ||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatta 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
|||| | ||| |||||||||| |||||||||||||| |||||||||||||
Sbjct: 65 atgagatt---cat-------taatatcaatgtgaatgtgggaaatgctagaatgactta 114
Query: 135 cattgtgaaacggaggaagta 155
||||||||||||||||||||
Sbjct: 115 tattgtgaaacggaggaagta 135
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
|||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaagtaa 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||| ||||||||||| ||||||||||||| |||||||| || ||||||||| || ||
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtt 63
Query: 74 aat 76
|||
Sbjct: 64 aat 66
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcatt 44
|||||||||||||||| |||||||| ||||
Sbjct: 110 tactccctccgtttcacaatgtaagccatt 81
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 126 aatgacttacattgtgaaacggaggaagta 155
|||| |||||||||||||||||||| ||||
Sbjct: 81 aatggcttacattgtgaaacggagggagta 110
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 129/155 (83%), Gaps = 13/155 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||||||||||||||||||| | |||||| ||| ||||||||||||| || |||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 75 atgaatcta-ac-catatatatct-----------aatatcaatatgaatgtgggaaata 121
||||||||| || ||||||||| | || ||| ||||||||||||| ||||
Sbjct: 98 atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagtaa 156
|||||| |||||||||| |||||||||||||||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagtaa 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||| |||||||||||||||||||||| |||||||||| | || |||||||| || ||
Sbjct: 4 ttacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtt 63
Query: 74 aatgaatctaaccatatatat 94
|||||||||| |||||||||
Sbjct: 64 aatgaatctagacatatatat 84
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 74 atcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagta 129
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||||||||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 75 atgaatctaaccatatat 92
||| ||||| |||||||
Sbjct: 69 atggatctagacatatat 52
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 130 acttacattgtgaaacggaggaagta 155
||||||||||||||||||||| ||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagt 40
|||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 96 taatatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 99 taatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 158
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||| ||||||||||||| ||||| || ||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 75 atgaatcta 83
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/154 (83%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||||||||||||||||| ||| | ||||||||||| || |||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 75 atgaatcta-ac---catatatatc---------taatatcaatatgaatgtgggaaata 121
||||||||| || ||| |||||| ||| ||| ||||| ||||||| |||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| |||| ||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 107 atatgaatatgggtaatgctagaatgacttacattatgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||| |||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctag 38
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 121/143 (84%), Gaps = 3/143 (2%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||||||||||||| || ||||| || ||||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 75 atgaatct--aaccatatatatctaatatcaatatgaatgtgggaaatactagaatgact 132
|||||||| | | | || || ||| |||||||||||| | | |||| |||||||||||
Sbjct: 65 atgaatctagatctagattcat-taacatcaatatgaatatagtaaatgctagaatgact 123
Query: 133 tacattgtgaaacggaggaagta 155
|| |||||| |||||||||||||
Sbjct: 124 tatattgtggaacggaggaagta 146
Score = 79.8 bits (40), Expect = 1e-14
Identities = 119/143 (83%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| |||||||| || ||| ||||||||||||| |||| ||||||||||| || |||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 75 atgaatctaaccatatatatc--taatatcaatatgaatgtgggaaatactagaatgact 132
||||||||| || || || ||| ||||||||||||||||||||| || |||||||
Sbjct: 86 atgaatctagatctagat-tcattaacatcaatatgaatgtgggaaatggtaaaatgact 28
Query: 133 tacattgtgaaacggaggaagta 155
|||||| ||||||||||| ||||
Sbjct: 27 tacattatgaaacggagggagta 5
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 59 atcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggaggaagta 114
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 106 atgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcat 64
|||||||||||||||| ||||||||||||||||| ||||| || ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| ||||| | ||||||||| || |||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 75 atgaat 80
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 121/143 (84%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||||||||||||| || ||||| || ||||||||| || |||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 75 atgaatct--aaccatatatatctaatatcaatatgaatgtgggaaatactagaatgact 132
|||||||| | | | || || ||| |||||||||||| | | |||| |||||||||||
Sbjct: 86 atgaatctagatctagattcat-taacatcaatatgaatatagtaaatgctagaatgact 28
Query: 133 tacattgtgaaacggaggaagta 155
|| |||||| |||||||||||||
Sbjct: 27 tatattgtggaacggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 119/143 (83%), Gaps = 3/143 (2%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| |||||||| || ||| ||||||||||||| |||| ||||||||||| || |||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 75 atgaatctaaccatatatatc--taatatcaatatgaatgtgggaaatactagaatgact 132
||||||||| || || || ||| ||||||||||||||||||||| || |||||||
Sbjct: 65 atgaatctagatctagat-tcattaacatcaatatgaatgtgggaaatggtaaaatgact 123
Query: 133 tacattgtgaaacggaggaagta 155
|||||| ||||||||||| ||||
Sbjct: 124 tacattatgaaacggagggagta 146
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||
Sbjct: 97 atcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggagggagta 152
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||| ||||||||||| ||||||||||||||||| |||| || |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatatt 57
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatatt 57
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcatt 44
||||||||| ||||||||||||||||||||
Sbjct: 143 tactccctctgtttcataatgtaagtcatt 114
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 79 atcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 134
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||| ||| ||||| || ||||||||| || |||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 75 atgaatc 81
|||||||
Sbjct: 74 atgaatc 68
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacgga 148
|||||||||||||||| |||| | | |||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| |||| |||||||||||| ||||| || ||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 75 atgaa 79
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||| ||||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatt 57
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||||||||||||||| ||||||||||| |||||
Sbjct: 111 tactccctccgtttcacaatgtaagtcaatctag 78
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||| ||||||||||||||||||||||| ||||
Sbjct: 78 ctagattgacttacattgtgaaacggagggagta 111
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| ||| |||||||| ||| |||||||||||||||| |||||||| ||||
Sbjct: 60 atcaatataaatatgggaaatgctataatgacttacattgtggaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||| ||||||||||| |||||||| |||||||| ||||| || |||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatatt 80
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 79 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 87.7 bits (44), Expect = 5e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 93.7 bits (47), Expect = 7e-19
Identities = 119/141 (84%), Gaps = 9/141 (6%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||||||||||||| |||||||| ||||||||| ||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattttagtatttttcatattca------tattg 83
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
|||| ||| | | || || ||| |||||||||||| ||| |||| ||||||||||||
Sbjct: 82 atga--ctatctacattcat-taacatcaatatgaatatggaaaatgttagaatgactta 26
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| |||||||||||||||| |||| |||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 75 atgaat 80
||||||
Sbjct: 65 atgaat 70
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| || |||||||| ||||||||||||| ||||||||||| ||||
Sbjct: 81 atcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagta 136
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 120/147 (81%), Gaps = 13/147 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| |||| | |||||| || ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 75 atgaatctaaccatatatatc-------------taatatcaatatgaatgtgggaaata 121
||||||||| |||||||||| ||| ||||||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 122 ctagaatgacttacattgtgaaacgga 148
||||||||||||||||||||||||||
Sbjct: 38 gtagaatgacttacattgtgaaacgga 12
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||| ||||||||| |||||||||||||||| |||||||| ||||||||| || |||
Sbjct: 5 tactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 93.7 bits (47), Expect = 7e-19
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| ||||| || ||||||| | || |||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 75 atgaatctaaccatatatatcta 97
||||||||| ||||||||||||
Sbjct: 102 atgaatctagacatatatatcta 80
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 107 atcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcata 65
|||| ||||||||||| ||||||||||||||||| ||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcata 55
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 93.7 bits (47), Expect = 7e-19
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 105 tatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcata 65
|||| ||||||||||| ||||||||||||||||| ||||| || |||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttct 55
||||||||| |||||| ||||||||||||||||| ||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcatttct 45
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 116 gaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| |||||||||||||||||||||||| |||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 93.7 bits (47), Expect = 7e-19
Identities = 116/141 (82%), Gaps = 11/141 (7%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||| |||||| ||||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| ||| |||||||||||||||| |||| ||| |||||||||
Sbjct: 70 atgaatcta-----------ttaacatcaatatgaatgtggaaaatgctataatgactta 22
Query: 135 cattgtgaaacggaggaagta 155
|||||||||| |||||||||
Sbjct: 21 tattgtgaaacagaggaagta 1
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||
Sbjct: 75 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagggagta 130
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 101 tcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 71.9 bits (36), Expect = 3e-12
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||| |||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 59 atcaatatgaatgtgg-aaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||||||||||||||| ||| ||||||||||||| ||||| || |||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttc-cacattcatatt 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||| ||||||||||| ||| ||||||||||||| ||||| || |||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 62
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/152 (81%), Gaps = 11/152 (7%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| |||| ||| ||||||| | || |||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 75 atgaatctaaccatatatat-----------ctaatatcaatatgaatgtgggaaatact 123
||||||||| |||||||| ||| || | |||||||||||||||| |
Sbjct: 96 atgaatctagatatatatatgtctaaattcattaacatgagtatgaatgtgggaaatgcc 37
Query: 124 agaatgacttacattgtgaaacggaggaagta 155
||||||||||| ||||||||||||||||||||
Sbjct: 36 agaatgacttatattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 105 tatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||| |||| ||||||||||||||||||||||||||||| ||||
Sbjct: 106 tatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaac 157
||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 80 atcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggaggaagtaac 137
Score = 85.7 bits (43), Expect = 2e-16
Identities = 118/143 (82%), Gaps = 10/143 (6%)
Strand = Plus / Minus
Query: 13 gttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatat 72
|||||| ||||||||||| ||| ||||||||||||| |||||||| ||||||||| ||
Sbjct: 137 gttacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgc 78
Query: 73 taatgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgact 132
|||||||||| ||| || ||||||||||||||| ||||| |||||||||||
Sbjct: 77 taatgaatct---cat-------tagcatcaatatgaatgtgagaaatgctagaatgact 28
Query: 133 tacattgtgaaacggaggaagta 155
||||| ||||||| |||| ||||
Sbjct: 27 tacatcgtgaaacagagggagta 5
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 120/146 (82%), Gaps = 13/146 (8%)
Strand = Plus / Minus
Query: 18 tccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatattaatg 77
||||||||||||| ||||||||||||||||| |||||||| ||||||||| || | ||||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 78 aatctaaccata----tatatcta---------atatcaatatgaatgtgggaaatacta 124
|||||| |||| ||| |||| || |||||||||||||| || || |||
Sbjct: 95 aatctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgcta 36
Query: 125 gaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||||||
Sbjct: 35 gaatgacttacattgtgaaacggagg 10
Score = 87.7 bits (44), Expect = 5e-17
Identities = 125/152 (82%), Gaps = 13/152 (8%)
Strand = Plus / Plus
Query: 12 tgttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaata 71
||||| ||||||||||||| ||||||||||||||||| || ||||| ||||||||| | |
Sbjct: 2 tgttattccctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaa 61
Query: 72 ttaatgaatcta-ac---catatatatcta---------atatcaatatgaatgtgggaa 118
| |||||||| || ||||||| |||| | ||||||||||||||| |||
Sbjct: 62 tcgntgaatctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaa 121
Query: 119 atactagaatgacttacattgtgaaacggagg 150
|| |||||||||||||||||||||||||||||
Sbjct: 122 atgctagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 125/154 (81%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||||||| || ||| ||||||||||||| |||| ||| ||||||||| ||||||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 75 atgaatctaaccatatatatct-------------aatatcaatatgaatgtgggaaata 121
|||||||||| | |||||| | || | |||||| ||||||||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 125/154 (81%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 75 atgaatctaaccatatatatc-------------taatatcaatatgaatgtgggaaata 121
||||||||| |||||||||| ||||||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| |||||| |||||||| ||||
Sbjct: 125 ctagaatgacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||||||||||||||||| |||||||||||| |||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 75 atgaatctaa 84
|||||||||
Sbjct: 65 gtgaatctaa 74
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 95 ctaatatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagt 154
|||| ||| |||| ||| || ||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 65 ctaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacggagggagt 6
Query: 155 a 155
|
Sbjct: 5 a 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattca 63
||||||||| |||||||||||||||||||| ||| |||| ||| |||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattca 110
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaac 157
|||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 103 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtaac 160
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 12 tgttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaata 71
||||||||||||||||||| ||||||||||||||||| |||| || ||||||||| ||
Sbjct: 161 tgttactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 102
Query: 72 ttaatgaatcta 83
||||||||||||
Sbjct: 101 ttaatgaatcta 90
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 102 caatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 58 caatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 115/141 (81%), Gaps = 15/141 (10%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| |||||||| ||||||||| | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
|||||| |||||||| |||||||| ||| |||| |||||||||||||
Sbjct: 65 atgaat------atatatat---------atatgaatatggaaaatgctagaatgactta 109
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||| ||||
Sbjct: 110 cattgtgaaacggagggagta 130
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||||||||||||||||| ||||| | ||||||||| || |||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 63 atgaatcta 55
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||| |||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 68 atcaatatgaatgtaggaaatgctagaatgacttacattatgaaacggagggagta 123
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 117 aaatactagaatgacttacattgtgaaacggaggaagta 155
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtattt 53
|||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 103 aatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacgga 148
|||||||||||| |||||||| ||||||||||||| |||||||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 22 tccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
||||||||| ||| ||||||||||||| ||||| ||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatatt 57
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatta 68
|||| ||||||||||| ||| ||||||||||||| ||||| || ||||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatta 66
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 115/141 (81%), Gaps = 13/141 (9%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||| ||||||||||||| || || || ||||||||| || |||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
|||||||||| ||| |||||||||||||| |||| |||||||||||||
Sbjct: 72 atgaatctaaacat-------------caatatgaatgtggaaaatgctagaatgactta 26
Query: 135 cattgtgaaacggaggaagta 155
|||||||||||||||| ||||
Sbjct: 25 cattgtgaaacggagggagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||| || ||||||||||||| ||||||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggatatgctagaatgacttatattgtgaaacggaggaagta 132
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 103 aatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||| ||| |||||||||||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 66 atcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagggagta 121
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||| ||||||||||| ||||||||||||| ||| ||||| || |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||| ||||||||||||| ||||| || ||| ||| | || |||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 75 atgaa 79
|||||
Sbjct: 61 atgaa 57
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
|||||||||||| | |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatataggaaatgctagaatgacttacattgtgaaacggaggaagtaa 4
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||| || ||
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtt 63
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
|||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||
Sbjct: 75 atcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacggaggaagtaa 131
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||| |||||| | ||||||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||||||||||||||| ||||||||||||| | |||||| || |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatatt 57
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 96 taatatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 49 taatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaagta 108
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| |||| ||||||||||||||||| ||| ||| ||||| ||||||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatta 49
Query: 75 at 76
||
Sbjct: 48 at 47
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtgaaacggaggaagtaac 157
|||||||||||||||||||||||||||| ||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagtaac 3
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 13 gttactccctccgtttcataatgtaagtcattcta 47
|||||||||||||||||| ||||||||||||||||
Sbjct: 3 gttactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 97 atcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 152
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| |||| ||||||||||||||||||||||||||||| ||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||| ||||||||||| ||||||||||||||||| |||| ||||||||||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatatt 100
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||||||||||||||| ||||||||||||||||| ||||| || ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatatt 57
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 12 tgttactccctccgtttcataatgtaagtcattctagtatttc 54
||||||||||||||||| | ||||||| ||||||||| |||||
Sbjct: 110 tgttactccctccgttttacaatgtaaatcattctagcatttc 68
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 87.7 bits (44), Expect = 5e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| ||||| || |||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
|||||||||||||||| ||||||||||||||||| ||||| || ||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| |||| |||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 75 atgaat 80
||||||
Sbjct: 65 atgaat 70
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
||||| |||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 129 tactctctccgtttcataatgtaagtcattctagcattttccatattcatatt 77
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggag 149
|||||||||||| ||| |||| ||||||||||||||||| ||||||||||
Sbjct: 74 atcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 12 tgttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaata 71
|||||||||||||||||||||||||||||||||||||||||| ||| || ||||| ||
Sbjct: 161 tgttactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatg 102
Query: 72 ttaatgaatcta 83
|||||||||||
Sbjct: 101 ctaatgaatcta 90
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
|||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatat 56
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 107 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| ||||| || |||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 75 atgaatctaaccatatata 93
|||||||||| |||||||
Sbjct: 98 atgaatctaaatatatata 80
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 76 atcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||| ||||||||||| ||||||||||||||||| |||| ||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatatt 79
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| |||| || ||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattcta 47
|||| |||||||||||||||| |||||||||||
Sbjct: 134 tacttcctccgtttcataatggaagtcattcta 102
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 53/56 (94%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 101 tcaatatgaatgtgggaaatactagaatgacttacattgtg-aaacggaggaagta 155
|||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagta 116
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||||||||||||||| ||| ||||||||||||| ||||| || |||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 26 tttcataatgtaagtcattctagtatttctcatattcatatt 67
||||| ||| ||||||||||||| ||||| || |||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatatt 63
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 72 atcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggaggaagta 127
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||| ||||||||||||| |||||||| ||||||||| || |||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 75 atgaatcta 83
|||||||||
Sbjct: 67 atgaatcta 59
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 116 gaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttc 54
|||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
||||||||||| |||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 117 ttactccctccatttcataatgtaagtcattctagtatttttcacattcatatt 64
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||||||||||||||| ||||||||||||| |||||||| ||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatatt 57
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 101 tcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
|||||||||||||| |||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagtaa 117
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 83.8 bits (42), Expect = 7e-16
Identities = 91/105 (86%), Gaps = 3/105 (2%)
Strand = Plus / Minus
Query: 36 taagtcattctagtatttctcatattcatattaatattaatgaatctaaccatatatatc 95
||||||||||||| |||||||| ||||||||| || ||||||||||| ||||||| ||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagacatatat-tc 46
Query: 96 --taatatcaatatgaatgtgggaaatactagaatgacttacatt 138
|| ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 45 attagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 32 aatgtaagtcattctagtatttctcatattcatattaatattaatgaat 80
||||||||||||||||| |||||||| ||||||||| || ||||||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaat 49
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgactta 134
||||||||||||||| ||||| |||||||||||||
Sbjct: 70 atcaatatgaatgtgagaaatgctagaatgactta 104
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 16 actccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatattaa 75
||||||||||||||||||||||||||||||||| ||||| || |||||||| | |||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 76 tgaatctaaccatatatatcta 97
|||||||| ||||||||||||
Sbjct: 97 tgaatctagacatatatatcta 76
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 4 ttactccctccgtttcataatgtaagtcattctagcatttcctatattcatat 56
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggagg 150
||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 107 atatgaatgtgggaaatgctagaatgacttacattatgaaacggagg 153
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggag 149
||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggag 11
Score = 81.8 bits (41), Expect = 3e-15
Identities = 116/140 (82%), Gaps = 12/140 (8%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||| |||||||||| |||||||||||||||| ||||| || ||||||||| || |||
Sbjct: 5 tactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 64
Query: 75 atgaatctaaccatatata---tc--taatatcaatatgaatgtgggaaatactagaatg 129
|||||||||| ||||| || || ||| |||||||||| |||| ||||||||
Sbjct: 65 atgaatctaaacatatctagattcattaacatcaatatga-------aaatgctagaatg 117
Query: 130 acttacattgtgaaacggag 149
||||||||||||||||||||
Sbjct: 118 acttacattgtgaaacggag 137
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 83.8 bits (42), Expect = 7e-16
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 99 tatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 69 tatcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 99 tatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 61 tatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||||||||||||||| ||||||||| ||||||| |||| || |||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatatt 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||||||||||||||| ||||||||| ||||||| |||| || |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatatt 57
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 124/154 (80%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||| |||| |||||||| |||| ||| ||| ||||| || ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 75 atgaatctaaccatatatatcta-------------atatcaatatgaatgtgggaaata 121
||||||||| |||||||||||| | || ||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||| ||||||||| ||||||||||||||||||||
Sbjct: 38 ctacaatgacttatattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||| ||||||||| ||| ||||| || ||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| |||||| |||| |||||||| |||| ||||||||||||||| ||||
Sbjct: 103 atcaatataaatgtgaaaaatgctagaatggcttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 83.8 bits (42), Expect = 7e-16
Identities = 116/141 (82%), Gaps = 6/141 (4%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||||||| |||||||||||| |||| || ||||||||| || |||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| |||| ||| ||||| || |||||| |||| |||||||||||||
Sbjct: 79 atgaatctagacata------taacatcaacataaatgtgaaaaatgctagaatgactta 26
Query: 135 cattgtgaaacggaggaagta 155
|||| ||||||||||| ||||
Sbjct: 25 cattatgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||| |||| |||||||||||| ||| ||||||||||||||||
Sbjct: 84 atcaatatgaatgtggaaaatgttagaatgacttatattatgaaacggaggaagta 139
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtattt 53
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 103 aatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||| ||| ||| ||||||||||||||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 103 aatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaac 157
|||||||||||| ||||| || ||| ||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagtaac 3
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatta 68
|||| ||||||||||| ||||||||| ||| ||| ||||| || ||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatta 87
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 99 tatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 61 tatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 99 tatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 69 tatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||||||||||||||| ||||||||| ||||||| |||| || |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatatt 57
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||||||||||||||| ||||||||| ||||||| |||| || |||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatatt 73
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||||||||||||||||| ||| | |||||||||| || |||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 75 atgaatcta 83
|||||||||
Sbjct: 98 atgaatcta 90
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||||||||||||||||||||| | | |||| |||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
|||||||||||| |||| ||||||||||||||||||||||||||||| |||||
Sbjct: 107 atatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtaa 159
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||||||||||||||| ||||||||||||||||| |||| || |||||||| | ||
Sbjct: 159 ttactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtt 100
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacgga 148
||||||||||||||||| |||||||||||||||| || ||||||
Sbjct: 56 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 12
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||| |||||||||||||||||||||||||| ||||| || ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| ||| || ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 60 atcaatataaatatgagaaatactagaatgacttatattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatat 60
|||||||||||||||||||||||||||||| ||| ||||| |||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcatttcacatat 83
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 116 gaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| ||| ||||||||||||| ||||||||||| ||||
Sbjct: 89 gaaatgctacaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 103 aatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| |||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 57 aatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| |||||||| ||| |||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtta 64
Query: 75 atg 77
|||
Sbjct: 65 atg 67
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 122 ctagaatgacttacattgtgaaacgga 148
|||||||||||||||||||| ||||||
Sbjct: 68 ctagaatgacttacattgtggaacgga 94
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||||| |||||| || |||||||||||||||||
Sbjct: 101 tactccttccgttccacaatgtaagtcattctag 68
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||||||||||||||||| ||| | |||||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||||||||||||||||||||| | | |||| |||||||| || |||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 75 atgaatcta 83
|||||||||
Sbjct: 98 atgaatcta 90
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| | || ||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 56 atatgaatataggcaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
|||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 4 ttactccctccgtttcataatgtaagtcattctaacatttctcacattcatat 56
Score = 77.8 bits (39), Expect = 4e-14
Identities = 118/145 (81%), Gaps = 7/145 (4%)
Strand = Plus / Minus
Query: 12 tgttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaata 71
||||||||||||||||| |||||||||||||||||| |||| || |||| ||| ||
Sbjct: 141 tgttactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatg 82
Query: 72 ttaatgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgac 131
||| |||||||| |||||| ||| | |||||||||| ||||| |||||||||
Sbjct: 81 ttagtgaatctagacatatacatcca-------tatgaatgtgagaaatgttagaatgac 29
Query: 132 ttacattgtgaaacggaggaagtaa 156
||||||| ||||||||||| |||||
Sbjct: 28 ttacattatgaaacggagggagtaa 4
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| |||||||||| |||||| |||| ||||||||||||||| |||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 75 atgaatcta 83
|||||||||
Sbjct: 74 atgaatcta 66
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 103 aatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||| ||| |||| |||||| |||||||||||||||||||||||||||
Sbjct: 82 aatatgaatatggaaaatgctagaaggacttacattgtgaaacggaggaagta 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattcta 47
||||||||||||||||||||||||||||||||||
Sbjct: 4 ttactccctccgtttcataatgtaagtcattcta 37
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
||||||||||||||||| ||||||||||||| ||||||||||||||| |||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtaa 4
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| |||||||||||||||||||| ||||||| |||| ||| ||||||||| || |||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 75 atgaatcta 83
|||||||||
Sbjct: 70 atgaatcta 62
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
||||||||||||||||| ||| ||||||||||||| ||||| || ||||||||
Sbjct: 4 ttactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||
Sbjct: 75 atcaatatgaatgtgaaaaatgatagaatggcttacattatgaaacggaggaagta 130
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||| | |||||||||||||||||||||||| |||| ||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
|||||||||||||||| || | ||| ||||||||||||| |||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggaggaagtaa 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||| ||||||||||||||||||||||||| ||| | || || ||||||||| || ||
Sbjct: 4 ttacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtt 63
Query: 74 aatga 78
|||||
Sbjct: 64 aatga 68
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
||||||||| |||||| ||||||||||||||||| | ||| || |||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatatt 71
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| |||| ||||||||||||||||||||||||||||| ||||
Sbjct: 107 atatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| |||| || |||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 75 atgaatctaaccatatatat 94
|||||| ||| |||||||||
Sbjct: 98 atgaatttaaacatatatat 79
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||||||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||
Sbjct: 83 atcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||||||||||||||||||||||||||||| ||| ||||| || |||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatatt 86
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||| ||||||||||| |||| ||||||||||||| ||| |||||| |||||||||
Sbjct: 60 atcagtatgaatgtggaaaatgctagaatgacttatattatgaaacagaggaagta 5
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 12 tgttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaata 71
|||||||||||||||||||||||||||||||||||| |||| ||| || |||||| ||
Sbjct: 161 tgttactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatg 102
Query: 72 ttaatgaatcta 83
|||||||||||
Sbjct: 101 ctaatgaatcta 90
Score = 77.8 bits (39), Expect = 4e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||||||||||||||||| |||| || |||||||| || |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 75 atgaatctaaccatatatatcta 97
||||||||| ||||||||||||
Sbjct: 65 atgaatctagacatatatatcta 87
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| |||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||| ||| |||| || ||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 75 atga 78
||||
Sbjct: 65 atga 68
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||| |||| ||| ||| | ||||||||||||||||||| ||||
Sbjct: 73 atcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||| ||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
|||||||||||||| | |||||||||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 117 aaatactagaatgacttacattgtgaaacggaggaagtaa 156
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 92 aaatgctagaatgacttacattgtgaaacggaggaagtaa 131
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||| ||||||||||| ||||||||||||||||| |||| ||| | ||||| || ||
Sbjct: 131 ttacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtt 72
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 71 aatgaatcta 62
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||| |||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 109 aatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacgg 147
|||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttc 54
|||||||||||||||| ||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc 44
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttc 54
|||||||||||||||| ||||||||||||||||| |||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttc 110
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 23 ccgtttcataatgtaagtcattctagtatttc 54
|||||||| ||||||||||||||||| |||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttc 67
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| |||||||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 103 atcaatataaatgtgggaaatgctaaaatgacttactttgtgaaacggaggaagta 158
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| |||||||||||| | | |||||||||| |||||||||||||| ||||
Sbjct: 60 atcaatataaatgtgggaaatgcaaaaatgacttactttgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| || |||||||||| ||| ||||| || ||| ||||| || |||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 75 atgaatcta 83
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 101 tcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||| || ||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttc 54
|||||||||||||||| ||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc 44
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||||||||||||| ||||||
Sbjct: 71 ctagaatgacttatattgtgaaacggaagaagta 104
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||||||||||||||| |||||||| | |||||||||| | ||||||||||| || ||
Sbjct: 159 ttactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtt 100
Query: 74 aatgaatctaaccatatat 92
|||||||||| |||||||
Sbjct: 99 aatgaatctagacatatat 81
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
|||||||| |||| |||||||||| | |||||||||||||||||||| |||||
Sbjct: 107 atatgaatatgggcaatactagaaagtcttacattgtgaaacggagggagtaa 159
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||| | |||||||| | | ||||||||||| || |||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 75 atgaat 80
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa
Japonica Group
Length = 143
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtattt 53
|||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagtattt 43
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 110 atgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||| |||||||||||||||||||||| ||||||||||| ||||
Sbjct: 50 atgtggaaaatactagaatgacttacattatgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||||||||| ||||||||| ||||||||||||| |||| |||||| |||||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatatt 87
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| ||| ||| |||| ||||||||||||| ||| ||||| ||||| ||||
Sbjct: 84 atcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagta 139
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 110 atgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttc 54
|||||||||||||||| ||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc 44
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||||||||||||||| ||||||| |||||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctag 62
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||| ||||||||||||||||||| ||||
Sbjct: 62 ctagaatgatttacattgtgaaacggagggagta 95
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 75.8 bits (38), Expect = 2e-13
Identities = 120/145 (82%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||| ||||||| |||| ||| ||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 75 atgaatct--aaccatatatatctaatatcaatatgaatgtgggaaatactagaatgact 132
|||||||| | | | || || || |||||||| ||||| | |||| ||| ||||| |
Sbjct: 65 atgaatctagatctaaattcat-tagcatcaatataaatgtagaaaatgctaaaatgatt 123
Query: 133 tacattgtgaaacggaggaagtaac 157
|||||||||||||||||| ||||||
Sbjct: 124 tacattgtgaaacggagggagtaac 148
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgaaaaatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 110 atgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||||||||||||||| |||||||||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattctag 61
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||| ||||
Sbjct: 61 ctagaatgacttacattgtgaaacggagggagta 94
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttc 54
|||| |||||||| || ||||||||||||||||| |||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||||||||||||||| ||||||||||||| ||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatatt 57
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| ||| || ||||| ||| ||||||||||||||||||||||||| ||||
Sbjct: 60 atcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| ||| || ||||| ||| ||||||||| ||||||||||||||||||||
Sbjct: 67 atcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagta 122
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||| ||||||||||| ||| ||||||||| ||| |||||||||||| |||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatatt 70
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 73.8 bits (37), Expect = 7e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 119 atactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||||||||||||||||||||||
Sbjct: 41 atactagaatgacttacattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 109 aatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
||||| |||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 43 aatgtaggaaatgctagaatgacttacattgtgaaacggagtaagtaa 90
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtat 51
|||| ||||||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtat 41
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 21 ctccgtttcataatgtaagtcattctagtatttc 54
|||||||||| ||||||||||||||||| |||||
Sbjct: 83 ctccgtttcacaatgtaagtcattctagcatttc 50
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 111 tgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 64 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 106 atgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||| ||||||| ||| ||||||||||||||||||||||||| ||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttc 54
|||||||||||||||| ||||||||||||| ||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttc 44
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtattt 53
|||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattt 70
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||||||||||||||||||| | |||||| ||| | ||||||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| |||||||||||||||||||| | |||||| ||| || |||||||| ||| |||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 75 atgaatcta 83
|||||||||
Sbjct: 96 atgaatcta 88
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| ||| |||||| | |||||||| ||||||||||||||||
Sbjct: 105 atatgaatgtggacaatgctagaaagtcttacattatgaaacggaggaagta 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| | || ||| |||||| | |||||||| ||||||||||| ||||
Sbjct: 60 atcaatatgaatataggcaatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||||||||||||||||| ||| | | |||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||| || ||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 56 atatgaatgttggtaatgctagaatgacttacattatgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctag 48
||||| |||||||||||||||||||||||||||||
Sbjct: 159 ttacttcctccgtttcataatgtaagtcattctag 125
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
||||||||||||| |||||||||| | |||||||||||||||||||| |||||
Sbjct: 107 atatgaatgtgggcaatactagaaagtcttacattgtgaaacggagggagtaa 159
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||||||||||||||| |||||||| | |||||||||| | || |||||||| || ||
Sbjct: 159 ttactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtt 100
Query: 74 aatgaatctaaccatatat 92
|||||||||| |||||||
Sbjct: 99 aatgaatctagacatatat 81
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| |||| | |||||||| | |||||||||||||||||||| ||||
Sbjct: 56 atatgaatatgggcagtactagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
|||||| |||||||||||||| ||||||| ||||| ||||||||||||||| |||||
Sbjct: 60 atcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagtaa 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 116 gaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 87 gaaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctca 57
|||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttctca 84
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattca 63
||||||||||||||||| ||| ||||| ||||||| ||||| || |||||
Sbjct: 4 ttactccctccgtttcacaatataagttattctagcatttcccacattca 53
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 73.8 bits (37), Expect = 7e-13
Identities = 115/141 (81%), Gaps = 5/141 (3%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||||||||||||||||||| | |||||| ||| | || |||||||| || |||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
||||||||| || || ||| ||| |||||||||| || ||| |||||| | ||||
Sbjct: 80 atgaatctatacacat-----taacatctatatgaatgtaggcaatgctagaaagtctta 26
Query: 135 cattgtgaaacggaggaagta 155
|||| ||||||||| ||||||
Sbjct: 25 cattatgaaacggaagaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| |||||| | |||||||| ||||||||||| ||||
Sbjct: 89 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 140
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| |||||| |||||||||| ||||||||||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagacttacattatgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| |||||||||||||||||||||| |||||| ||| | || |||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
||||||||||||||||||||||||| | ||||||
Sbjct: 122 tactccctccgtttcataatgtaagactttctag 89
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| |||||| |||||||||| ||||||||||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagacttacattatgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| |||||||||||||||||||||| |||||| ||| | || |||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
|||||||||||||||||||||||||||||||||| ||| | ||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattacctatattcatat 56
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||| ||||||||||||||||||||||| ||| | || |||||||| || |||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 75 atgaatctaaccatatatat 94
||||||||| |||||||||
Sbjct: 72 atgaatctagacatatatat 53
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||| | ||| ||||||||||||||||| ||||| ||||||||||
Sbjct: 81 atatgaatgtgtgcaatgctagaatgacttacattatgaaatggaggaagta 132
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttc 54
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttc 89
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 110 atgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagta 128
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||| ||||||||||| |||||||||||| |||||||| ||| |||| | ||||
Sbjct: 5 tacttccttcgtttcataatataagtcattctaacatttctcacatttatatggaaatta 64
Query: 75 atgaatcta 83
||||||||
Sbjct: 65 gtgaatcta 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 95 ctaatatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagt 154
||||| || |||| |||||| ||||| |||||||||||| ||| ||||||| |||||||
Sbjct: 65 ctaatttccatataaatgtgagaaatgttagaatgacttatattatgaaacgaaggaagt 6
Query: 155 a 155
|
Sbjct: 5 a 5
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||| |||||||||||||||| ||||||||||||||| ||||||||| ||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
||||||||| | ||| |||| ||| |||||||||||||||||||||||||||||||
Sbjct: 75 atcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaacggaggaagtaa 131
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||| ||||||||||| ||||||||||||| ||| |||| ||| | |||||| || ||
Sbjct: 131 ttacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtt 72
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 71 aatgaatcta 62
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttc 54
|||||||||||||| | ||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattttagtatttc 44
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||||||||||||| ||| ||| | || |||||||| || ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 75 atgaatctaaccatat 90
|||||||||| |||||
Sbjct: 98 atgaatctaaacatat 83
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||||||||||||||||||||| || | ||||| ||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| ||| ||||||||||||| ||||||||||| ||||
Sbjct: 107 atatgaatgtgggcaatgctaaaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 108 gaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| || | ||||||||||||||||||||||||||||||||||
Sbjct: 52 gaatgtggaaagtgctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||| ||||||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctag 48
||||| ||||||| ||||||| |||||||||||||
Sbjct: 86 ttactacctccgtctcataatataagtcattctag 52
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 71.9 bits (36), Expect = 3e-12
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 59 atcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| |||| ||| || |||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatgtta 63
Query: 75 atgaat 80
||||||
Sbjct: 64 atgaat 69
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 117 aaatactagaatgacttacattgtgaaacggagg 150
|||| |||||||||||||||||||||||||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacggagg 107
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 19 ccctccgtttcataatgtaagtcattctagtattt 53
|||||||||||| ||||||||||||||||| ||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagcattt 74
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||| | |||||| ||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 60 atcaatgtaaatgtgagaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| ||||||| |||| ||| ||||||||| ||||||||||||||| ||||
Sbjct: 97 atcaatataaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 152
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctca 57
|||| ||||||||||| ||||||||||||| ||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctca 47
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 116 gaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttc 54
|||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctca 57
|||||| ||||||||||||| ||||||||| ||| ||||||||
Sbjct: 91 tactccatccgtttcataatataagtcattttagcatttctca 49
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| | ||||| |||| ||||||||||||||||||||||||||||| ||||
Sbjct: 84 atcaatataattgtggaaaatgctagaatgacttacattgtgaaacggagggagta 139
Score = 67.9 bits (34), Expect = 4e-11
Identities = 114/141 (80%), Gaps = 6/141 (4%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||||||||||| |||| || | | ||||| || |||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
|| |||| |||||| || ||||||||| | |||| |||| ||| |||||||||
Sbjct: 79 ataaatc------tatatagatactatcaatataattgtgaaaaatgctaaaatgactta 26
Query: 135 cattgtgaaacggaggaagta 155
|||||||||| ||||| ||||
Sbjct: 25 cattgtgaaatggagggagta 5
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||| ||||||| |||||||||||||||||||||||| ||| |||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaacagagaaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagt 154
|||||||||||| || |||| ||| ||||||||| |||||||||||||||||||
Sbjct: 77 atcaatatgaatacggaaaatgctaaaatgacttatattgtgaaacggaggaagt 131
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 25 gtttcataatgtaagtcattctagtatttc 54
|||||| ||||||||||||||||| |||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| |||||| ||||| ||||||||||||| ||||| ||||||||||||||
Sbjct: 38 atcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggaggaagta 93
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatatt 67
|||| ||||||||| | ||| ||||||||||||| |||||||| ||| |||||
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatatt 41
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| |||||| | |||||||||||||||||||||||||
Sbjct: 83 atatgaatgtgggcaatgctagaaagtcttacattgtgaaacggaggaagta 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
|||||||||||||||||| |||||| | |||||| ||| ||| ||||||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattgttcacattcatat 56
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| || ||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 76 atcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| ||||||||||||||||| |||| ||| || ||||| || |||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 75 atgaat 80
||||||
Sbjct: 71 atgaat 66
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 117 aaatactagaatgacttacattgtgaaacggaggaagta 155
|||| ||| ||||||||||||||||||||||||| ||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtattt 53
|||||||||||||||| ||||||||||||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 109 aatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||| |||| ||||||||||||||||||||||||||||| ||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtattt 53
|||||||||||||||| ||||||||||||||||| ||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattt 78
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 108 gaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||| ||| |||| |||||||||||| |||||||||||||||| ||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattc 62
|||||||||||||||| |||| |||||||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattttccatattc 52
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 106 atgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
||||||||||| ||| |||||| | ||||||||||||||||||||||||||
Sbjct: 54 atgaatgtgggtaatgctagaaagtcttacattgtgaaacggaggaagtaa 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| |||||||| | |||||| ||| ||||| ||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 75 atgaatctaa 84
||||||||||
Sbjct: 98 atgaatctaa 89
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
|||||| | |||||||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 69.9 bits (35), Expect = 1e-11
Identities = 119/149 (79%), Gaps = 11/149 (7%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||| ||||||||||||| ||| | || |||| ||| ||| ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 75 atgaatctaaccatatatatct-----------aatatcaatatgaatgtgggaaatact 123
||||||||| ||| |||||| | || ||| ||||||||||||| ||| ||
Sbjct: 96 atgaatctagccacatatatgtccagattcattaacatctatatgaatgtgggcaatgct 37
Query: 124 agaatgacttacattgtgaaacggaggaa 152
||||||||||| ||| |||||||||||||
Sbjct: 36 agaatgacttatattatgaaacggaggaa 8
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 99 tatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||| ||| ||||||||| ||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 100 tatctataagaatgtgggcaatcctagaatgacttatattgtgaaacggagggagta 156
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 20 cctccgtttcataatgtaagtcattctagtatttctcatattcatattaatattaatgaa 79
||||||||||||||| ||||||||||||| ||| | || |||||||| || ||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 80 tct 82
|||
Sbjct: 70 tct 72
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 106 atgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||| ||||| ||||||||| ||||||||||||||||||| ||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcat 64
|||||||||||||||| ||||||| ||||||||| |||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||| ||| |||||||| ||||||| |||| |||||||
Sbjct: 59 atcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacgagggaagta 114
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||| ||||| ||||||| ||||| ||| |||| ||||||| ||||| ||| ||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatacta 47
Query: 75 atgaatcta 83
|||||||||
Sbjct: 46 atgaatcta 38
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtgaaacggaggaagta 155
||||||||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcatt 44
|||| ||||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| |||| |||||||||| |||||| |||||| ||| ||||||||||||| || |||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||| |||| | |||||| ||| | ||||||||||| || ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 75 atgaatcta 83
|||||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 107 tgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||| ||| ||||||| ||||||||| ||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| ||| ||||||| ||||||||| ||||||||||| ||||
Sbjct: 86 atatgaatgtggacaatgctagaataacttacattatgaaacggagggagta 137
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||| ||||||||||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagttattctag 38
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||| |||| | |||||||||| | ||||||||||| || |||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 75 atgaa 79
|||||
Sbjct: 65 atgaa 69
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| |||| |||||||||| | |||| ||| ||||||||||| ||||
Sbjct: 56 atatgaatatgggcaatactagaaagtcttatattatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| ||| ||| || | |||||||||||||||||||| ||||
Sbjct: 107 atatgaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 99 tatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||| ||||||||||||| ||| |||||| | |||||||||||||||||| ||||||
Sbjct: 70 tatccatatgaatgtgggcaatgctagaaagtcttacattgtgaaacggatgaagta 126
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| |||||||||||||||| |||| ||| |||||||| || ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 75 atgaatcta 83
|||||||||
Sbjct: 71 atgaatcta 63
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||| ||| |||| |||||||||||||||||||||||||||| ||||
Sbjct: 76 atcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaacggagggagta 131
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 18 tccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
||||||||||||| ||| |||||||||||| |||||||| ||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggagg 150
|||||||| || ||||| |||||||||||| |||||||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttct 55
|||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 146 tactcccttcgtttcataatgtaagtcattctagcatttct 106
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtattt 53
|||||||||||||||||||| ||||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcattt 43
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 112 gtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||| |||| ||||||||||||| ||| ||||||||||| ||||
Sbjct: 48 gtggaaaatgctagaatgacttatattatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 116 gaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| ||||||||||||||||| ||||||| ||| ||||
Sbjct: 107 gaaatgctagaatgacttacattatgaaacgaagggagta 146
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 96 taatatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||| ||||||||||||| || |||||| | ||||||||||||||| |||||||||
Sbjct: 55 taatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacagaggaagta 114
Query: 156 a 156
|
Sbjct: 115 a 115
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 37 aagtcattctagtatttctcatattcatattaatattaatgaatctaaccatatatatct 96
|||||||||||| ||||| || ||||||||| || |||||||||||| |||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 97 a 97
|
Sbjct: 50 a 50
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 37 aagtcattctagtatttctcatattcatattaatattaatgaatcta 83
|||||||||||| |||||||| ||||||||| || ||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatcta 47
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgactt 133
||||||||||||||||||||| ||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgactt 110
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgactt 133
||||||||||||||| ||||| ||||||||||||
Sbjct: 34 atcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||||| |||| | |||||||||| | ||||||||||| || |||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 75 atgaa 79
|||||
Sbjct: 98 atgaa 94
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| ||| ||| || | |||||||||||||||||||| ||||
Sbjct: 56 atatgaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| |||| |||||||||| | |||| ||| ||||||||||| ||||
Sbjct: 107 atatgaatatgggcaatactagaaagtcttatattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||||||||||||||||||| | || ||| ||| |||| |||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| |||||| | |||||||| ||||||||||||||||
Sbjct: 107 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| |||||||||||||||||||| | |||||| ||| | || |||||||| || |||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 75 atgaatcta 83
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||||||||||||||||||| | || ||| ||| |||| |||||||| || |||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 75 atgaatcta 83
|||||||||
Sbjct: 98 atgaatcta 90
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| |||||| | |||||||| ||||||||||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| |||||||||||||||||||| | |||||| ||| | || |||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 37 aagtcattctagtatttctcatattcatattaatattaatgaatctaaccatatatatct 96
|||||||||||| ||||| || ||||||||| || |||||||||||| |||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 97 a 97
|
Sbjct: 61 a 61
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgactt 133
||||||||||||||||||||| ||||||||||||
Sbjct: 34 atcaatatgaatgtgggaaatgctagaatgactt 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgactt 133
||||||||||||||||||||| ||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgactt 110
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 37 aagtcattctagtatttctcatattcatattaatattaatgaatctaa 84
|||||||||||| ||||| || ||||||||| || |||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaa 63
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| ||||||| ||| |||||| | |||||||||||||||||||||||||
Sbjct: 56 atatgtatgtgggcaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| |||||||| | |||||| ||| | || || ||||| ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 75 atgaatctaa 84
||||||||||
Sbjct: 65 atgaatctaa 74
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 106 atgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||| |||| ||| |||||| | |||||||||||||||||||| ||||
Sbjct: 109 atgaatttgggcaatgctagaaagtcttacattgtgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||||||||||||||| |||||||| | ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctag 125
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| | ||||| |||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 60 atcaatataattgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||||||||| ||||||| |||| || | | ||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcat 43
|||||||||||||||| ||||||||||||
Sbjct: 126 tactccctccgtttcacaatgtaagtcat 98
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 127 atgacttacattgtgaaacggaggaagta 155
|||||||||||||||||||||||| ||||
Sbjct: 98 atgacttacattgtgaaacggagggagta 126
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa
Indica Group
Length = 134
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
|||||||||||||||| |||| |||||| | ||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||| |||| |||| |||||||||| |||||||||||| ||||
Sbjct: 75 atcaatatgaatgtggaaaatgttagagtgacttacatggtgaaacggagggagta 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| |||||||||| |||| |||| || ||||||||| || |||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 75 atgaatcta 83
|||||||||
Sbjct: 70 atgaatcta 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| || ||||| ||| | |||||| |||||||||||||||| ||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| || |||| ||| ||||||||||||||||| ||||||||||||||||
Sbjct: 56 atatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
|||| ||||||||||||||||||||||||||||| ||| | ||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattacccatatgcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||| |||||||||||||| ||||||||| ||| | || || ||||| || |||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtta 73
Query: 75 atgaatcta 83
|||||||||
Sbjct: 72 atgaatcta 64
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| || |||||| | |||||||||||||||||||||||||
Sbjct: 56 atatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| |||||| |||||||||||||||||||| ||||
Sbjct: 69 atatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagta 120
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 13 gttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatat 72
||||||||||||||||||||||||||| | |||||| ||| | || |||||||| ||
Sbjct: 160 gttactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgc 101
Query: 73 taatgaatcta 83
|||||||||||
Sbjct: 100 taatgaatcta 90
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaac 157
||||||||||||| ||| |||||| | |||||||| ||||||||||| ||||||
Sbjct: 107 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagtaac 160
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 61.9 bits (31), Expect = 3e-09
Identities = 114/141 (80%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||||||||||||||||||| | |||||| ||| | || |||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 75 atgaatctaaccatatatatctaatatcaatatgaatgtgggaaatactagaatgactta 134
|||||| || || | | | | ||| ||||||||||||| ||| |||||| | ||||
Sbjct: 65 atgaatttagacacacaga---cacatctatatgaatgtgggcaatgctagaaagtctta 121
Query: 135 cattgtgaaacggaggaagta 155
|||| ||||||||||| ||||
Sbjct: 122 cattatgaaacggagggagta 142
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| |||||| | |||||||| ||||||||||| ||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
||||||||||||||||||||||||| | |||||| ||| | || ||||||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatat 91
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatatt 61
|||||||||||||||| ||||||| ||||||||| |||| |||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcatttttcatatt 58
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 117 aaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 43 aaatactagaatgacttatattgtgaaacgaagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtattt 53
|||||||| ||||||| ||| ||||||||||||||||||
Sbjct: 5 tactcccttcgtttcacaatataagtcattctagtattt 43
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 117 aaatactagaatgacttacattgtgaaacggaggaagta 155
|||| ||||||||| ||||||||||||||||||| ||||
Sbjct: 66 aaatgctagaatgatttacattgtgaaacggagggagta 104
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 106 atgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
|||||| |||| ||| |||||| | ||||||||||||||||||||||||||
Sbjct: 54 atgaatatgggcaatgctagaaagtcttacattgtgaaacggaggaagtaa 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 112 gtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| |||||||||| | |||||||||||||||||||| ||||
Sbjct: 115 gtgggcaatactagaaagtcttacattgtgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||| ||||||||||| |||||||| | |||||| ||| | ||||||||| | || ||
Sbjct: 4 ttacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtt 63
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatt 52
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtatt 121
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctca 57
||||||||||||||||||||||||||| |||||| ||| ||||
Sbjct: 83 tactccctccgtttcataatgtaagtctttctagcattgctca 41
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
|||||| |||||||||| ||||||||||||||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||| |||||||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctag 38
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
|||||| |||||||||| ||||||||||| ||||
Sbjct: 50 ctagaaagacttacattatgaaacggagggagta 83
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 22 tccgtttcataatgtaagtcattctagtatttctcatattcatattaatattaatgaatc 81
||||||||| ||| ||||||||| ||| |||| ||||||| | |||||| ||||||||||
Sbjct: 12 tccgtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatc 71
Query: 82 ta 83
||
Sbjct: 72 ta 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 117 aaatactagaatgacttacattgtgaaacggaggaagta 155
|||| ||| ||||||||| ||||||||||||| ||||||
Sbjct: 43 aaatgctaaaatgacttatattgtgaaacggaagaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 12 tgttactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
|||||| |||||||||||| ||| ||||||||| || |||| ||| ||||||||
Sbjct: 133 tgttaccccctccgtttcacaatataagtcattttaacatttttcacattcatat 79
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggagg 150
||||||||||| |||| || ||||||||| |||||||||||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggagg 125
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 106 atgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||| ||| |||||| | |||||||||||||||||||||||||
Sbjct: 54 atgaatgtggataatgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| |||||||| | |||||| ||| ||||||| ||||| | |||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 75 atgaatctaa 84
||||||||||
Sbjct: 65 atgaatctaa 74
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 106 atgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||| |||| ||| ||| || | |||||||||||||||||||||||||
Sbjct: 109 atgaatatgggcaatgctaaaaagtcttacattgtgaaacggaggaagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
|||||| | |||||||||||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgactt 133
||||||||||||||||||||| ||||||||||||
Sbjct: 34 atcaatatgaatgtgggaaatgctagaatgactt 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatgactt 133
||||||||||||||||||||| ||||||||||||
Sbjct: 90 atcaatatgaatgtgggaaatgctagaatgactt 123
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 37 aagtcattctagtatttctcatattcatattaatattaatgaatcta 83
|||||||||||| ||||| || ||||||||| || |||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatcta 47
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 37 aagtcattctagtatttctcatattcatattaatattaatgaatcta 83
|||||||||||| ||||| || ||||||||| || |||||| |||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatcta 77
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||| ||||||||||||||| | || ||| ||| | || |||||||| |||| |
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatca 99
Query: 75 atgaatctaaccatatat 92
|||||||||| |||||||
Sbjct: 98 atgaatctaaacatatat 81
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| || |||||| | |||||||| |||||| |||||||||
Sbjct: 56 atatgaatgtgggcaaggctagaaagtcttacattatgaaaccgaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 98 atatcaatatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| ||||||||||||| ||| ||| || | |||||||| |||||| |||| ||||
Sbjct: 101 atatctatatgaatgtgggcaatgctaaaaagtcttacattatgaaaccgagggagta 158
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 100 atcaatatgaatgtgggaaatactagaatgactt 133
||||||||||||||||||||| ||||||||||||
Sbjct: 34 atcaatatgaatgtgggaaatgctagaatgactt 1
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 100 atcaatatgaatgtgggaaatactagaatga 130
||||||||||||||||||||| |||||||||
Sbjct: 57 atcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaac 157
||||||||||||| ||| |||||| | |||||||| ||||| ||||||||||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagtaac 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 12 tgttactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
||||||| ||||| |||||||||||||| | |||||| ||| | || ||||||||
Sbjct: 133 tgttacttcctccatttcataatgtaagactttctagcattgcccacattcatat 79
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
||||||||| ||||||||||||||| | ||||||
Sbjct: 5 tactccctcagtttcataatgtaagactttctag 38
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa Japonica
Group
Length = 93
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
||||||||||||||| ||||||||||||||||||
Sbjct: 38 ctagaatgacttacactgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 117 aaatactagaatgacttacattgtgaaacggaggaagtaa 156
|||| ||||||||||||| |||||||||||||| ||||||
Sbjct: 51 aaatgctagaatgacttatattgtgaaacggagtaagtaa 90
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||| ||||||||||| | |||||||||||||||
Sbjct: 5 tacttcctccgtttcacagtgtaagtcattctag 38
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
||||| ||||| | ||| |||||| | ||||||||||||||||||||||||||
Sbjct: 107 atatgtatgtgagcaatgctagaaagtcttacattgtgaaacggaggaagtaa 159
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||| ||||||||||| |||||||| | |||||| ||| |||| || ||||| || ||
Sbjct: 159 ttacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtt 100
Query: 74 aatgaatctaa 84
|||||||||||
Sbjct: 99 aatgaatctaa 89
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 106 atgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
|||||||| || |||| || || | |||||||||| |||||||||||||||
Sbjct: 54 atgaatgtaggcaatattaaaaagtcttacattgtaaaacggaggaagtaa 4
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 107 tgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||| ||| |||||| | |||||||| ||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
||||||||| ||| ||| |||||| | |||||||||||||||||||| |||||
Sbjct: 107 atatgaatgcgggcaatgctagaaagtcttacattgtgaaacggagggagtaa 159
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
||||||||||||||||| |||||||| | |||||| ||| | | |||||||| || ||
Sbjct: 159 ttactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtt 100
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||| |||||||||||||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctag 38
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 107 tgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||| | ||| |||||| | |||||||||||||||||||||||||
Sbjct: 53 tgaatgtgagcaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||||||||||||||||||| | |||||| ||| | || || ||||| || |||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 75 atgaatcta 83
|||||||||
Sbjct: 87 atgaatcta 79
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| ||||||| ||| |||||| | |||||||| ||||||||||| ||||
Sbjct: 96 atatgtatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 147
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| |||||||| | | |||| ||| |||| |||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 75 atgaatcta 83
|||||||||
Sbjct: 65 atgaatcta 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||| | ||| |||| | | |||||||||||||||||||| ||||
Sbjct: 56 atatgaatgtgagcaatgctaggaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| |||||| | |||||||| ||||||||||| ||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
||||||||||||||||||||||||| | |||||| ||| | || ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatat 56
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaa 38
||||||||||||||||||||||||
Sbjct: 142 tactccctccgtttcataatgtaa 119
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| ||| |||||| | |||||||||||||||||||| ||||
Sbjct: 89 atatgaatgtggacaatgctagaaagtcttacattgtgaaacggagggagta 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||||||||||||||| |||||||| | ||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctag 107
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| ||| || | |||||||| ||||||||||||||||
Sbjct: 56 atatgaatgtgggtaatgctataaagtcttacattatgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| ||||| | |||||||||||||||||||| ||||
Sbjct: 107 atatgaatgtgggcaatgttagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 13 gttactccctccgtttcataatgtaagtcattctag 48
||||||||||||||||||||||||||| | ||||||
Sbjct: 160 gttactccctccgtttcataatgtaagactttctag 125
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||| | ||| |||||| | |||||||| ||||||||||||||||
Sbjct: 56 atatgaatgtagacaatgctagaaagtcttacattatgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 67/79 (84%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatt-tctcatattcatattaatatt 73
|||| |||||||||||||||||||| | |||||| ||| ||| | |||||||| || ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtct-acattcatatagatgtt 63
Query: 74 aatgaatctaaccatatat 92
|||||||||| |||||||
Sbjct: 64 aatgaatctagacatatat 82
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaac 157
|||||||||||| || |||||| | |||||||| ||||||||||| ||||||
Sbjct: 107 atatgaatgtggacaaacctagaaagtcttacattatgaaacggagggagtaac 160
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| |||||||||| | |||| | | ||||||||||||||||
Sbjct: 56 atatgaatgtgggtaatactagaaagtcttataatatgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| | | |||| | |||||| ||| | || |||||||| || |||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 75 atgaatctaaccatatatat 94
||||||||| |||||||||
Sbjct: 72 atgaatctagacatatatat 53
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
|||||||||||||| | |||||||| | |||||| ||| |||||||||||||
Sbjct: 108 tactccctccgttttacaatgtaagactttctagcattgctcatattcatat 57
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 106 atgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagtaa 156
||||||||||| ||| |||||| | ||||||||||||||| |||| |||||
Sbjct: 54 atgaatgtgggtaatgctagaaagtcttacattgtgaaacagagggagtaa 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 14 ttactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatt 73
|||||||||| |||||| |||||||| | |||||| ||| | || |||||| | || ||
Sbjct: 4 ttactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtt 63
Query: 74 aatgaatctaaccatat 90
||||||||||| |||||
Sbjct: 64 aatgaatctaaacatat 80
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 13 gttactccctccgtttcataatgtaag 39
|||||||||||||||||| ||||||||
Sbjct: 162 gttactccctccgtttcacaatgtaag 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 131 cttacattgtgaaacggaggaagtaac 157
|||||||||||||||||||| ||||||
Sbjct: 136 cttacattgtgaaacggagggagtaac 162
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 118 aatactagaatgacttacattgtgaaacggaggaagtaa 156
||||||| || | ||||||||||||||||||||||||||
Sbjct: 42 aatactataaagtcttacattgtgaaacggaggaagtaa 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 110 atgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||| ||| |||||| | |||||||||||||||||||| ||||
Sbjct: 113 atgtgggcaatgctagaaagtcttacattgtgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||||||||||||||| |||||||| | ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctag 125
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| |||||||| |||| ||| ||| ||||||| ||||| || |||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 75 atgaat 80
||||||
Sbjct: 77 atgaat 72
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 126 aatgacttacattgtgaaacggaggaagta 155
|||| |||||||||||||||||||||||||
Sbjct: 108 aatgtcttacattgtgaaacggaggaagta 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaa 38
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaa 28
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
|||||| | |||||||||||||||||||||||||
Sbjct: 106 ctagaaagtcttacattgtgaaacggaggaagta 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
|||||| | |||| ||||||||||||||||||||
Sbjct: 38 ctagaaaggcttagattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 109 aatgtgggaaatactagaatgacttacattgtgaaacggagg 150
||||||| |||||||||| | ||||||||||||||||||||
Sbjct: 72 aatgtggacaatactagaaagccttacattgtgaaacggagg 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 18 tccctccgtttcataatgtaagtcattctagtatt 52
||||||||||||| |||||||| | ||||||||||
Sbjct: 115 tccctccgtttcacaatgtaaggctttctagtatt 81
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 122 ctagaatgacttacattgtgaaacggaggaagta 155
|||||| | |||||||||||||||||||| ||||
Sbjct: 38 ctagaaagccttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||||||||||||||| |||||||| | ||||||
Sbjct: 5 tactccctccgtttcacaatgtaaggctttctag 38
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 21 ctccgtttcataatgtaagtcattctagtatttctcatattcatat 66
||||||||||||||||||| | |||||| ||| | |||||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccatattcatat 56
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 14 ttactccctccgtttcataatgtaagtcattctag 48
||||||||||||||||| |||||||| | ||||||
Sbjct: 99 ttactccctccgtttcacaatgtaagactttctag 65
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 122 ctagaatgacttacattgtgaaacggaggaagtaa 156
|||||| | |||||||||||||||||||| |||||
Sbjct: 65 ctagaaagtcttacattgtgaaacggagggagtaa 99
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| ||||||||||| |||||||| |||| ||| ||| ||||||| ||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 75 atgaat 80
||||||
Sbjct: 65 atgaat 70
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtgaaacggaggaagta 155
|||| |||||||||||||||||||||||||
Sbjct: 34 aatgtcttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaa 38
||||||||||||||||||||||||
Sbjct: 137 tactccctccgtttcataatgtaa 114
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 18 tccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatattaatg 77
|||||||||||||||||||||| | |||||| ||| ||||||||||| || |||| |
Sbjct: 8 tccctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacg 67
Query: 78 aatcta 83
||||||
Sbjct: 68 aatcta 73
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
||||||||||||||||||||||||| | ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctag 38
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 106 atgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||| ||| |||||| | ||| |||| ||||||||||||||||
Sbjct: 54 atgaatgtgggtaatgctagaaagtcttgcattatgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||| |||||||||||||||| ||| | |||||| ||| | || |||||| | || |||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 75 atgaatctaaccatatatat 94
|||||||||| || ||||||
Sbjct: 65 atgaatctaaacacatatat 84
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
||||||||||||||||||||||||| | ||||||
Sbjct: 124 tactccctccgtttcataatgtaagactttctag 91
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctag 48
|||||||||| |||||||||||||| | ||||||
Sbjct: 5 tactccctccatttcataatgtaagactttctag 38
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 106 atgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||| || ||| || | |||||||||||||||||||||||||
Sbjct: 54 atgaatgtgggcaacgctacaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||| ||||||||||||||||||| | |||||| ||| |||||| |||| || |||
Sbjct: 137 tactctctccgtttcataatgtaagactttctagcattgtccatatttatatagatgtta 78
Query: 75 atgaatcta 83
|||||||||
Sbjct: 77 atgaatcta 69
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaag 39
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaag 29
>RF00906;MIR1122;AAAA02014181.1/4882-4767 39946:Oryza sativa Indica
Group
Length = 116
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaag 39
|||||||||||||||||||||||||
Sbjct: 112 tactccctccgtttcataatgtaag 88
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
||||||||| ||||||||||||||| | |||||| ||| || |||||||| || |||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 75 atgaatcta 83
|||||||||
Sbjct: 72 atgaatcta 64
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
|||||||||||| ||| |||||| | |||||||| ||||| ||||||||||
Sbjct: 56 atatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagta 5
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||||| | |||| | |||||| ||| | || |||||||| || |||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 75 atgaatcta 83
|||||||||
Sbjct: 100 atgaatcta 92
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| |||||| | |||| | | ||||||||||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa
Japonica Group
Length = 160
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaag 39
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaag 29
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 131 cttacattgtgaaacggaggaagta 155
|||||||||||||||||||||||||
Sbjct: 132 cttacattgtgaaacggaggaagta 156
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| |||||| | |||| | | ||||||||||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| |||||| | |||| | | ||||||||||||||||
Sbjct: 107 atatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagta 158
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||| |||| | |||||| ||| | || || ||||| || |||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 75 atgaatctaaccatat 90
|||||||||| |||||
Sbjct: 76 atgaatctaaacatat 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| ||||||| ||| |||||| | |||| ||||||||||||||| ||||
Sbjct: 85 atatgtatgtgggtaatgctagaaagtcttatattgtgaaacggagggagta 136
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 15 tactccctccgtttcataatgtaagtcattctagtatttctcatattcatattaatatta 74
|||||||||||||||| ||| |||| | |||||| ||| | || || ||||| || |||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 75 atgaatctaaccatat 90
|||||||||| |||||
Sbjct: 65 atgaatctaaacatat 80
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||| ||||||| ||| |||||| | |||| ||||||||||||||| ||||
Sbjct: 56 atatgtatgtgggtaatgctagaaagtcttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 155
||||||||||||| ||| |||||| | |||| | | ||||||||||||||||
Sbjct: 75 atatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagta 126
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 104 atatgaatgtgggaaatactagaatgacttacattgtgaaacggagg 150
|||||||||||| ||| |||||| | |||||||| |||||||||||
Sbjct: 57 atatgaatgtggacaatgctagaaagtcttacattatgaaacggagg 103
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 18 tccctccgtttcataatgtaagtcattctag 48
|||||||||||||||||||||| | ||||||
Sbjct: 105 tccctccgtttcataatgtaagactttctag 75
