miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53945_ptc-miRf12123-akr:pmrd
Length = 111
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttcttgatcgcaacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttcttgatcgcaacg 70
Query: 61 acgcaattttggctgctgatttctggatcggcagc 95
|||||||||||||||||||||||||||||||||||
Sbjct: 71 acgcaattttggctgctgatttctggatcggcagc 105
>53946_ptc-miRf12124-akr:pmrd
Length = 86
Score = 109 bits (55), Expect = 4e-25
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttcttgatcg 55
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttcttgatcg 86
>53323_ptc-miRf11501-akr:pmrd
Length = 100
Score = 97.6 bits (49), Expect = 1e-21
Identities = 71/77 (92%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 20 gcagcgaagtagttttcgttgccgatttcttgatcg-caacgacgcaattttggctgctg 78
||||||||| |||||||| ||||||||||||||||| || ||||||| |||||||||| |
Sbjct: 4 gcagcgaagcagttttcgctgccgatttcttgatcggcagcgacgcagttttggctgccg 63
Query: 79 atttctggatcggcagc 95
|||||||||||||||||
Sbjct: 64 atttctggatcggcagc 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 64/77 (83%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttcttgatc-gcaac 59
|||||||||||| ||| ||||||| | |||||| | ||||||||||| |||| ||| |
Sbjct: 21 gctgccgatttcttgatcggcagcgacgcagttttggctgccgatttctggatcggcagc 80
Query: 60 gacgcaattttggctgc 76
|||||| |||| |||||
Sbjct: 81 gacgcacttttcgctgc 97
>52004_ptc-miRf10182-akr:pmrd
Length = 172
Score = 87.7 bits (44), Expect = 1e-18
Identities = 84/96 (87%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttcttgatc-gcaac 59
|||||||||||| ||||| || |||| | |||||||| |||||||||| ||||| ||| |
Sbjct: 39 gctgccgatttctgcatcggcggcgacgcagttttcgctgccgatttcatgatcggcagc 98
Query: 60 gacgcaattttggctgctgatttctggatcggcagc 95
|||||| |||||||||| |||||||| |||||||||
Sbjct: 99 gacgcagttttggctgccgatttctgcatcggcagc 134
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttct 49
|||||||||||| ||||| ||||||| | |||||||| | |||||||||
Sbjct: 111 gctgccgatttctgcatcggcagcgacgcagttttcgctaccgatttct 159
Score = 40.1 bits (20), Expect = 3e-04
Identities = 63/76 (82%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 21 cagcgaagtagttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgctga 79
|||||| | |||||||| ||||||||||| ||| || ||||||| |||| ||||| ||
Sbjct: 23 cagcgatgcagttttcgctgccgatttctgcatcggcggcgacgcagttttcgctgccga 82
Query: 80 tttctggatcggcagc 95
|||| ||||||||||
Sbjct: 83 tttcatgatcggcagc 98
>53335_ptc-miRf11513-akr:pmrd
Length = 107
Score = 79.8 bits (40), Expect = 3e-16
Identities = 83/96 (86%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttcttgatc-gcaac 59
|||||||||||| | ||| ||||||| | |||||||| |||||||||||||||| || |
Sbjct: 7 gctgccgatttctggatcggcagcgacgcagttttcgctgccgatttcttgatcatcagc 66
Query: 60 gacgcaattttggctgctgatttctggatcggcagc 95
|||||| |||| ||||| |||||||| |||||||||
Sbjct: 67 gacgcagttttcgctgccgatttctgcatcggcagc 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 31 gttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgctgatttctggatc 89
||||||| ||||||||||| |||| ||| ||||||| |||| ||||| ||||||| ||||
Sbjct: 1 gttttcgctgccgatttctggatcggcagcgacgcagttttcgctgccgatttcttgatc 60
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 67 ttttggctgctgatttctggatcggcagc 95
|||| ||||| ||||||||||||||||||
Sbjct: 2 ttttcgctgccgatttctggatcggcagc 30
>53334_ptc-miRf11512-akr:pmrd
Length = 107
Score = 79.8 bits (40), Expect = 3e-16
Identities = 83/96 (86%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttcttgatc-gcaac 59
|||||||||||| | ||| ||||||| | |||||||| |||||||||||||||| || |
Sbjct: 7 gctgccgatttctggatcggcagcgacgcagttttcgctgccgatttcttgatcatcagc 66
Query: 60 gacgcaattttggctgctgatttctggatcggcagc 95
|||||| |||| ||||| |||||||| |||||||||
Sbjct: 67 gacgcagttttcgctgccgatttctgcatcggcagc 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 31 gttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgctgatttctggatc 89
||||||| ||||||||||| |||| ||| ||||||| |||| ||||| ||||||| ||||
Sbjct: 1 gttttcgctgccgatttctggatcggcagcgacgcagttttcgctgccgatttcttgatc 60
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 67 ttttggctgctgatttctggatcggcagc 95
|||| ||||| ||||||||||||||||||
Sbjct: 2 ttttcgctgccgatttctggatcggcagc 30
>53333_ptc-miRf11511-akr:pmrd
Length = 107
Score = 79.8 bits (40), Expect = 3e-16
Identities = 83/96 (86%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttcttgatc-gcaac 59
|||||||||||| | ||| ||||||| | |||||||| |||||||||||||||| || |
Sbjct: 7 gctgccgatttctggatcggcagcgacgcagttttcgctgccgatttcttgatcatcagc 66
Query: 60 gacgcaattttggctgctgatttctggatcggcagc 95
|||||| |||| ||||| |||||||| |||||||||
Sbjct: 67 gacgcagttttcgctgccgatttctgcatcggcagc 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 31 gttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgctgatttctggatc 89
||||||| ||||||||||| |||| ||| ||||||| |||| ||||| ||||||| ||||
Sbjct: 1 gttttcgctgccgatttctggatcggcagcgacgcagttttcgctgccgatttcttgatc 60
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 67 ttttggctgctgatttctggatcggcagc 95
|||| ||||| ||||||||||||||||||
Sbjct: 2 ttttcgctgccgatttctggatcggcagc 30
>52146_ptc-miRf10324-akr:pmrd
Length = 135
Score = 79.8 bits (40), Expect = 3e-16
Identities = 84/96 (87%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttcttgatcg-caac 59
|||||||||||| ||||| || |||||| |||||||| | |||||||||||||| || |
Sbjct: 39 gctgccgatttctgcatcggcggcgaagcagttttcgct-acgatttcttgatcgtcagc 97
Query: 60 gacgcaattttggctgctgatttctggatcggcagc 95
|||||| |||||||||| |||||||| |||||||||
Sbjct: 98 gacgcagttttggctgccgatttctgcatcggcagc 133
Score = 46.1 bits (23), Expect = 4e-06
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 39 tgccgatttcttgatc-gcaacgacgcaattttggctgctgatttctggatcggc 92
||||||||||||| || ||||||| ||| |||| ||||| |||||||| ||||||
Sbjct: 5 tgccgatttcttggtcggcaacgatgcagtttttgctgccgatttctgcatcggc 59
>52103_ptc-miRf10281-akr:pmrd
Length = 102
Score = 58.0 bits (29), Expect = 1e-09
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttct 49
||||| |||||| ||||| ||||||| |||||||||| |||||||||||
Sbjct: 81 gctgctgatttcagcatcggcagcgacgtagttttcgctgccgatttct 33
Score = 42.1 bits (21), Expect = 7e-05
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgat 45
|||||||||||| ||||| ||||| | | |||||||| |||||||
Sbjct: 45 gctgccgatttctgcatcggcagcaacgcagttttcgctgccgat 1
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 59 cgacgcaattttggctgctgatttctggatcggcagc 95
||||||| |||| |||||||||||| | |||||||||
Sbjct: 94 cgacgcagtttttgctgctgatttcagcatcggcagc 58
>52963_ptc-miRf11141-akr:pmrd
Length = 107
Score = 56.0 bits (28), Expect = 5e-09
Identities = 80/96 (83%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttcttgatc-gcaac 59
|||||||||||| ||||| ||||||| | |||||||| || |||||||| ||| ||| |
Sbjct: 7 gctgccgatttctgcatcggcagcgacgcagttttcgctgtcgatttctgcatcggcagc 66
Query: 60 gacgcaattttggctgctgatttctggatcggcagc 95
|||||| |||| |||| |||||| ||||||||||
Sbjct: 67 gacgcagtttttactgccgatttcatgatcggcagc 102
>52189_ptc-miRf10367-akr:pmrd
Length = 110
Score = 56.0 bits (28), Expect = 5e-09
Identities = 80/96 (83%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttcttgatc-gcaac 59
|||||||||||| ||||| ||||||| | |||||||| || ||||||| ||||| ||| |
Sbjct: 101 gctgccgatttctgcatcggcagcgatgcagttttcgctggcgatttcatgatcggcagc 42
Query: 60 gacgcaattttggctgctgatttctggatcggcagc 95
| ||| |||| ||||| |||||||| ||| |||||
Sbjct: 41 aatgcagttttcgctgccgatttctgcatcagcagc 6
>54147_ptc-miRf12325-akr:pmrd
Length = 110
Score = 54.0 bits (27), Expect = 2e-08
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgctgatttctggat 88
|||||||| |||| ||||||||||| ||| ||||||| |||| ||||| ||||||| ||
Sbjct: 19 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgccgatttctcaat 78
Query: 89 cggcagc 95
|||||||
Sbjct: 79 cggcagc 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttct 49
|||||||||||| ||| ||||||| | |||||||| |||||||||||
Sbjct: 62 gctgccgatttctcaatcggcagcgatgcagttttcgctgccgatttct 110
>54146_ptc-miRf12324-akr:pmrd
Length = 110
Score = 54.0 bits (27), Expect = 2e-08
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgctgatttctggat 88
|||||||| |||| ||||||||||| ||| ||||||| |||| ||||| ||||||| ||
Sbjct: 19 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgccgatttctcaat 78
Query: 89 cggcagc 95
|||||||
Sbjct: 79 cggcagc 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttct 49
|||||||||||| ||| ||||||| | |||||||| |||||||||||
Sbjct: 62 gctgccgatttctcaatcggcagcgatgcagttttcgctgccgatttct 110
>52613_ptc-miRf10791-akr:pmrd
Length = 112
Score = 54.0 bits (27), Expect = 2e-08
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 30 agttttcgttgccgatttcttgatcg-caacgacgcaattttggctgctgatttctggat 88
|||||||| ||| ||||||| |||| || ||| ||| |||| |||||||||||||||||
Sbjct: 109 agttttcgctgctgatttctgcatcggcagcgatgcagttttcgctgctgatttctggat 50
Query: 89 cggcagc 95
|||||||
Sbjct: 49 cggcagc 43
>52055_ptc-miRf10233-akr:pmrd
Length = 112
Score = 54.0 bits (27), Expect = 2e-08
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 30 agttttcgttgccgatttcttgatcg-caacgacgcaattttggctgctgatttctggat 88
|||||||| ||| ||||||| |||| || ||| ||| |||| |||||||||||||||||
Sbjct: 109 agttttcgctgctgatttctgcatcggcagcgatgcagttttcgctgctgatttctggat 50
Query: 89 cggcagc 95
|||||||
Sbjct: 49 cggcagc 43
>53240_ptc-miRf11418-akr:pmrd
Length = 79
Score = 52.0 bits (26), Expect = 7e-08
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 20 gcagcgaagtagttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgctg 78
||||||| | |||||||| |||| ||||||||||| ||| ||||||| |||| ||||| |
Sbjct: 12 gcagcgacgcagttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgccg 71
Query: 79 atttct 84
||||||
Sbjct: 72 atttct 77
>53239_ptc-miRf11417-akr:pmrd
Length = 110
Score = 52.0 bits (26), Expect = 7e-08
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 20 gcagcgaagtagttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgctg 78
||||||| | |||||||| |||| ||||||||||| ||| ||||||| |||| ||||| |
Sbjct: 45 gcagcgacgcagttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgccg 104
Query: 79 atttct 84
||||||
Sbjct: 105 atttct 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1 gctgccgatttcggcatctgcagcgaa 27
|||||||||||| ||||||||||||||
Sbjct: 49 gctgccgatttctgcatctgcagcgaa 23
>53958_ptc-miRf12136-akr:pmrd
Length = 96
Score = 50.1 bits (25), Expect = 3e-07
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 20 gcagcgaagtagttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgctg 78
||||||| | |||||||| ||||||||||| ||| || ||||||| |||| ||||| |
Sbjct: 2 gcagcgatgcagttttcgctgccgatttctgcatcggcggcgacgcagttttcgctgccg 61
Query: 79 atttctggatcggcagc 95
||||||| |||||||||
Sbjct: 62 atttctgcatcggcagc 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttct 49
|||||||||||| ||||| || |||| | |||||||| |||||||||||
Sbjct: 19 gctgccgatttctgcatcggcggcgacgcagttttcgctgccgatttct 67
>54128_ptc-miRf12306-akr:pmrd
Length = 151
Score = 48.1 bits (24), Expect = 1e-06
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgctgatttct 84
|||||||| |||| ||||||||||| ||| ||||||| |||| ||||| |||||||
Sbjct: 94 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgccgatttct 149
>54127_ptc-miRf12305-akr:pmrd
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgctgatttct 84
|||||||| |||| ||||||||||| ||| ||||||| |||| ||||| |||||||
Sbjct: 19 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgccgatttct 74
>53507_ptc-miRf11685-akr:pmrd
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgctgatttct 84
|||||||| |||| ||||||||||| ||| ||||||| |||| ||||| |||||||
Sbjct: 19 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgccgatttct 74
>53505_ptc-miRf11683-akr:pmrd
Length = 146
Score = 48.1 bits (24), Expect = 1e-06
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgctgatttct 84
|||||||| |||| ||||||||||| ||| ||||||| |||| ||||| |||||||
Sbjct: 91 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgccgatttct 146
>53457_ptc-miRf11635-akr:pmrd
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 2 ctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttct 49
||||||||||| | ||| ||||||| | |||||||| |||||||||||
Sbjct: 11 ctgccgatttctgtatcggcagcgacgcagttttcgctgccgatttct 58
>53936_ptc-miRf12114-akr:pmrd
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 67 ttttggctgctgatttctggatcggca 93
||||||||||||||||||| |||||||
Sbjct: 5 ttttggctgctgatttctgaatcggca 31
>52219_ptc-miRf10397-akr:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 39 tgccgatttcttgatcgcaa-cgacgcaattttggctgctgatttctggat 88
||||||||| ||||||| | ||||||| |||||||||| |||||||||||
Sbjct: 5 tgccgattttttgatcggtagcgacgcagttttggctgccgatttctggat 55
>54264_ptc-miRf12442-akr:pmrd
Length = 156
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 20 gcagcgaagtagttttcgttgccgatttct 49
||||||| | ||||||||||||||||||||
Sbjct: 122 gcagcgacgcagttttcgttgccgatttct 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 48/56 (85%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgctgatttct 84
|||||||| |||| ||||||||||| ||| ||||||| |||| | ||| |||||||
Sbjct: 96 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgttgccgatttct 151
>54109_ptc-miRf12287-akr:pmrd
Length = 156
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 20 gcagcgaagtagttttcgttgccgatttct 49
||||||| | ||||||||||||||||||||
Sbjct: 122 gcagcgacgcagttttcgttgccgatttct 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 48/56 (85%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgctgatttct 84
|||||||| |||| ||||||||||| ||| ||||||| |||| | ||| |||||||
Sbjct: 96 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgttgccgatttct 151
>53824_ptc-miRf12002-akr:pmrd
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 66 attttggctgctgatttctggatcggcagc 95
||||| |||||||||||||| |||||||||
Sbjct: 40 atttttgctgctgatttctgaatcggcagc 69
>53721_ptc-miRf11899-akr:pmrd
Length = 80
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 70 tggctgctgatttctggatcggcagc 95
|||||||||||||||| |||||||||
Sbjct: 35 tggctgctgatttctgaatcggcagc 10
>53378_ptc-miRf11556-akr:pmrd
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 70 tggctgctgatttctggatcggcagc 95
|||||||||||||||| |||||||||
Sbjct: 45 tggctgctgatttctgaatcggcagc 70
>52814_ptc-miRf10992-akr:pmrd
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 70 tggctgctgatttctggatcggcagc 95
|||||||||||||||| |||||||||
Sbjct: 45 tggctgctgatttctgaatcggcagc 70
>52560_ptc-miRf10738-akr:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 70 tggctgctgatttctggatcggcagc 95
|||||||||||||||| |||||||||
Sbjct: 40 tggctgctgatttctgaatcggcagc 15
>52362_ptc-miRf10540-akr:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 66 attttggctgctgatttctggatcggcagc 95
||||| |||||||||||||| |||||||||
Sbjct: 66 atttttgctgctgatttctgaatcggcagc 95
>52309_ptc-miRf10487-akr:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 70 tggctgctgatttctggatcggcagc 95
|||||||||||||||| |||||||||
Sbjct: 40 tggctgctgatttctgaatcggcagc 15
>54145_ptc-miRf12323-akr:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 46/53 (86%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 44 atttcttgatc-gcaacgacgcaattttggctgctgatttctggatcggcagc 95
||||||||||| ||| ||||||| |||| ||||| ||||||| |||||||||
Sbjct: 2 atttcttgatcggcagcgacgcagttttcgctgccgatttctcaatcggcagc 54
Score = 42.1 bits (21), Expect = 7e-05
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttct 49
|||||||||||| ||| ||||||| | |||||||| |||||||||||
Sbjct: 31 gctgccgatttctcaatcggcagcgatgcagttttcgctgccgatttct 79
>54056_ptc-miRf12234-akr:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 1 gctgccgatttcggcatctgcagcgaagtagttttcgttgccgatttct 49
|||||||||||| ||| ||||||| | |||||||| |||||||||||
Sbjct: 39 gctgccgatttcatgatcggcagcgacgcagttttcgctgccgatttct 87
>54018_ptc-miRf12196-akr:pmrd
Length = 110
Score = 42.1 bits (21), Expect = 7e-05
Identities = 43/49 (87%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 29 tagttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgc 76
||||||||| |||| ||||||||||| ||| ||||||| |||| |||||
Sbjct: 18 tagttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgc 66
>53009_ptc-miRf11187-akr:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 59 cgacgcaattttggctgctgatttctggatcggcagc 95
|||| ||||||| |||| ||||||||||||||||||
Sbjct: 25 cgacacaatttttgctgtcgatttctggatcggcagc 61
>52782_ptc-miRf10960-akr:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 67 ttttggctgctgatttctggatcggcagc 95
||||||||||||||||||| |||| ||||
Sbjct: 3 ttttggctgctgatttctgaatcgacagc 31
>52291_ptc-miRf10469-akr:pmrd
Length = 180
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 67 ttttggctgctgatttctggatcggcagc 95
|||||||||||||||||| |||||||||
Sbjct: 2 ttttggctgctgatttctaaatcggcagc 30
>52089_ptc-miRf10267-akr:pmrd
Length = 110
Score = 42.1 bits (21), Expect = 7e-05
Identities = 43/49 (87%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 29 tagttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgc 76
||||||||| |||| ||||||||||| ||| ||||||| |||| |||||
Sbjct: 93 tagttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgc 45
>52023_ptc-miRf10201-akr:pmrd
Length = 179
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 67 ttttggctgctgatttctggatcggcagc 95
|||||||||||||||| || |||||||||
Sbjct: 108 ttttggctgctgatttttgaatcggcagc 80
>52022_ptc-miRf10200-akr:pmrd
Length = 179
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 67 ttttggctgctgatttctggatcggcagc 95
|||||||||||||||| || |||||||||
Sbjct: 108 ttttggctgctgatttttgaatcggcagc 80
>54272_ptc-miRf12450-akr:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgc 76
|||||||| |||| ||||||||||| ||| ||||||| |||| |||||
Sbjct: 19 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgc 66
>54240_ptc-miRf12418-akr:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgc 76
|||||||| |||| ||||||||||| ||| ||||||| |||| |||||
Sbjct: 19 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgc 66
>54149_ptc-miRf12327-akr:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgc 76
|||||||| |||| ||||||||||| ||| ||||||| |||| |||||
Sbjct: 19 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgc 66
>54148_ptc-miRf12326-akr:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgc 76
|||||||| |||| ||||||||||| ||| ||||||| |||| |||||
Sbjct: 19 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgc 66
>54130_ptc-miRf12308-akr:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgc 76
|||||||| |||| ||||||||||| ||| ||||||| |||| |||||
Sbjct: 19 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgc 66
>53855_ptc-miRf12033-akr:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 gctgctgatttctggatcggcagc 95
||||| ||||||||||||||||||
Sbjct: 12 gctgccgatttctggatcggcagc 35
>53812_ptc-miRf11990-akr:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgc 76
|||||||| |||| ||||||||||| ||| ||||||| |||| |||||
Sbjct: 16 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgc 63
>53506_ptc-miRf11684-akr:pmrd
Length = 138
Score = 40.1 bits (20), Expect = 3e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgc 76
|||||||| |||| ||||||||||| ||| ||||||| |||| |||||
Sbjct: 87 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgc 134
>53474_ptc-miRf11652-akr:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgc 76
|||||||| |||| ||||||||||| ||| ||||||| |||| |||||
Sbjct: 15 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgc 62
>53357_ptc-miRf11535-akr:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 30 agttttcgttgccgatttcttgatcg-caacgacgcaattttggctgc 76
|||||||| |||| |||||||||||| || ||||||| |||| |||||
Sbjct: 12 agttttcgctgcccatttcttgatcgacagcgacgcagttttcgctgc 59
>53093_ptc-miRf11271-akr:pmrd
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 68 tttggctgctgatttctggatcgg 91
|||||||||||||||||| |||||
Sbjct: 7 tttggctgctgatttctgaatcgg 30
>53092_ptc-miRf11270-akr:pmrd
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 68 tttggctgctgatttctggatcgg 91
|||||||||||||||||| |||||
Sbjct: 10 tttggctgctgatttctgaatcgg 33
>52865_ptc-miRf11043-akr:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 72 gctgctgatttctggatcggcagc 95
||||| ||||||||||||||||||
Sbjct: 102 gctgccgatttctggatcggcagc 79
>52778_ptc-miRf10956-akr:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 gctgctgatttctggatcggcagc 95
|||||||||||||| |||||||||
Sbjct: 81 gctgctgatttctgaatcggcagc 104
>52437_ptc-miRf10615-akr:pmrd
Length = 147
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 68 tttggctgctgatttctggatcggcagc 95
|||||||||||||||||| ||| |||||
Sbjct: 75 tttggctgctgatttctgaatcagcagc 102
>52436_ptc-miRf10614-akr:pmrd
Length = 147
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 68 tttggctgctgatttctggatcggcagc 95
|||||||||||||||||| ||| |||||
Sbjct: 75 tttggctgctgatttctgaatcagcagc 102
>52225_ptc-miRf10403-akr:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 72 gctgctgatttctggatcggcagc 95
|||||||||||||| |||||||||
Sbjct: 66 gctgctgatttctgcatcggcagc 43
>52138_ptc-miRf10316-akr:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 30 agttttcgttgccgatttcttgatc-gcaacgacgcaattttggctgc 76
|||||||| |||| ||||||||||| ||| ||||||| |||| |||||
Sbjct: 92 agttttcgctgcccatttcttgatcggcagcgacgcagttttcgctgc 45
>52027_ptc-miRf10205-akr:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 68 tttggctgctgatttctggatcggcagc 95
|||||||||||||||||| ||| |||||
Sbjct: 72 tttggctgctgatttctgaatcagcagc 45
>52021_ptc-miRf10199-akr:pmrd
Length = 144
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 ttttggctgctgatttctggatcg 90
||||||||||||||||||| ||||
Sbjct: 20 ttttggctgctgatttctgaatcg 43
>51980_ptc-miRf10158-akr:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 gctgctgatttctggatcggcagc 95
|||||||||||||| |||||||||
Sbjct: 75 gctgctgatttctgcatcggcagc 98
