miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00005;tRNA;ABRN01084603.1/7597-7525 :
Length = 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 142 tccctggtggtctagtggttgagactccg 170
|||||||||||||||||||| ||||||||
Sbjct: 1 tccctggtggtctagtggttaagactccg 29
>RF00005;tRNA;ABRN01223534.1/1436-1508 :
Length = 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 142 tccctggtggtctagtggttgagactcc 169
|||||||||||||||||||| |||||||
Sbjct: 1 tccctggtggtctagtggttaagactcc 28
>RF00005;tRNA;ABRN01402814.1/3957-3885 :
Length = 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 142 tccctggtggtctagtggttgagactcc 169
|||||||||||| |||||||||||||||
Sbjct: 1 tccctggtggtccagtggttgagactcc 28
>RF00005;tRNA;AAWR02003477.1/84086-84157 :
Length = 72
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 143 ccctggtggtctagtggttgaga 165
|||||||||||||||||||||||
Sbjct: 2 ccctggtggtctagtggttgaga 24
>RF00005;tRNA;AAFC03091566.1/2000-1928 :
Length = 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 142 tccctggtggtctagtggttgagactc 168
|||||||||||||||||||| ||||||
Sbjct: 1 tccctggtggtctagtggttaagactc 27
>RF00005;tRNA;ABRN01187964.1/564-636 :
Length = 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 142 tccctggtggtctagtggttgagactc 168
||||||||||||||||||||| |||||
Sbjct: 1 tccctggtggtctagtggttgggactc 27
>RF00005;tRNA;ABRN01383491.1/15375-15447 :
Length = 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 142 tccctggtggtctagtggttgagactccgggctgc 176
|||||||||||| ||||||| |||||||| |||||
Sbjct: 1 tccctggtggtccagtggttaagactccgcgctgc 35
>RF00005;tRNA;ABRN01385999.1/4687-4616 :
Length = 72
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 142 tccctggtggtctagtggttgagactc 168
|||||||||||| ||||||||||||||
Sbjct: 1 tccctggtggtccagtggttgagactc 27
>RF00005;tRNA;ABRN01369038.1/7909-7837 :
Length = 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 142 tccctggtggtctagtggttgagactc 168
|||||||||||||||||||| ||||||
Sbjct: 1 tccctggtggtctagtggttaagactc 27
>RF00005;tRNA;AAWR02004317.1/23407-23336 :
Length = 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 143 ccctggtggtctagtggttgagactc 168
||||||||||||||||||| ||||||
Sbjct: 2 ccctggtggtctagtggttaagactc 27
>RF00005;tRNA;AAWR02027989.1/5306-5234 :
Length = 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 143 ccctggtggtctagtggttgagactc 168
||||||||||||||||||| ||||||
Sbjct: 2 ccctggtggtctagtggttaagactc 27
>RF00005;tRNA;AAWR02029755.1/42110-42039 :
Length = 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 144 cctggtggtctagtggttgaga 165
||||||||||||||||||||||
Sbjct: 3 cctggtggtctagtggttgaga 24
>RF00005;tRNA;AAWR02006613.1/101805-101875 :
Length = 71
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 143 ccctggtggtctagtggttgagactc 168
||||||||||||||||||| ||||||
Sbjct: 2 ccctggtggtctagtggttaagactc 27
>RF00005;tRNA;AAFC03021751.1/830-901 :
Length = 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 144 cctggtggtctagtggttgagactcc 169
|||||||||||||||||| |||||||
Sbjct: 3 cctggtggtctagtggttaagactcc 28
>RF00005;tRNA;AAFC03114754.1/21435-21364 :
Length = 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 143 ccctggtggtctagtggttgagactc 168
||||||||||||||||||| ||||||
Sbjct: 2 ccctggtggtctagtggttaagactc 27
