miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48585_gma-miR482:pmrd
Length = 95
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 98 tttcttcccaattccgcccattcctattatttct 131
||||||||||||||||||||||||||| ||||||
Sbjct: 60 tttcttcccaattccgcccattcctatgatttct 93
>54383_pvu-miR482:pmrd
Length = 133
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 98 tttcttcccaattccgcccattcctat 124
|||||||||||||||||||||||||||
Sbjct: 81 tttcttcccaattccgcccattcctat 107
Score = 40.1 bits (20), Expect = 5e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 14 ggagattggagaatttagaagttgtgggaatgggttggttggga 57
||||||||||| | | |||| ||||||||||||| || ||||||
Sbjct: 8 ggagattggagcaatcagaatttgtgggaatgggctgattggga 51
>54382_pvu-miR482:pmrd
Length = 133
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 98 tttcttcccaattccgcccattcctat 124
|||||||||||||||||||||||||||
Sbjct: 81 tttcttcccaattccgcccattcctat 107
Score = 40.1 bits (20), Expect = 5e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 14 ggagattggagaatttagaagttgtgggaatgggttggttggga 57
||||||||||| | | |||| ||||||||||||| || ||||||
Sbjct: 8 ggagattggagcaatcagaatttgtgggaatgggctgattggga 51
>48692_mdo-miR482:pmrd
Length = 152
Score = 46.1 bits (23), Expect = 8e-06
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 98 tttcttcccaattccgcccattcctattatttctaatttctcctccctttccctt 152
||||||||||| |||||||||||||| ||||| | | |||||||||||||||
Sbjct: 93 tttcttcccaagcccgcccattcctatgatttccagctgttcctccctttccctt 147
>48691_mdo-miR482:pmrd
Length = 152
Score = 46.1 bits (23), Expect = 8e-06
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 98 tttcttcccaattccgcccattcctattatttctaatttctcctccctttccctt 152
||||||||||| |||||||||||||| ||||| | | |||||||||||||||
Sbjct: 93 tttcttcccaagcccgcccattcctatgatttccagctgttcctccctttccctt 147
