miRNEST 2.0, an integrative microRNA resource :: BLAST
>46209_miR168:micropc
Length = 133
Score = 198 bits (100), Expect = 1e-51
Identities = 122/133 (91%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcgggacctacctcgccggcaacaatggcggtagctgacggcgacg 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggacctacctcgccggcaacaatggcggtagctgacggcgacg 60
Query: 84 gcagcttaccggtaaaaacnnnnnnnnnnnacatgtctgtggcgtagtttgggtcccgcc 143
||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 gcagcttaccggtaaaaactttttttttttacatgtctgtggcgtagtttgggtcccgcc 120
Query: 144 ttgcatcaactga 156
|||||||||||||
Sbjct: 121 ttgcatcaactga 133
>45664_miR168:micropc
Length = 133
Score = 198 bits (100), Expect = 1e-51
Identities = 122/133 (91%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcgggacctacctcgccggcaacaatggcggtagctgacggcgacg 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggacctacctcgccggcaacaatggcggtagctgacggcgacg 60
Query: 84 gcagcttaccggtaaaaacnnnnnnnnnnnacatgtctgtggcgtagtttgggtcccgcc 143
||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 gcagcttaccggtaaaaactttttttttttacatgtctgtggcgtagtttgggtcccgcc 120
Query: 144 ttgcatcaactga 156
|||||||||||||
Sbjct: 121 ttgcatcaactga 133
>45247_miR168:micropc
Length = 134
Score = 153 bits (77), Expect = 5e-38
Identities = 118/134 (88%), Gaps = 1/134 (0%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcgggacctacctcgccggcaacaatggcggtagctgacggcgacg 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggacctacctcgccggcaacaatggcggtagctgacggcgacg 60
Query: 84 gcagcttaccggtaaaaacnnnnnnnnnnna-catgtctgtggcgtagtttgggtcccgc 142
|||| ||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 61 ccagcgtaccggtaaaaactaattttttacatgttgtctgtggcgtagtttgggtcccgc 120
Query: 143 cttgcatcaactga 156
||||||||||||||
Sbjct: 121 cttgcatcaactga 134
>44885_miR168:micropc
Length = 134
Score = 153 bits (77), Expect = 5e-38
Identities = 118/134 (88%), Gaps = 1/134 (0%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcgggacctacctcgccggcaacaatggcggtagctgacggcgacg 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggacctacctcgccggcaacaatggcggtagctgacggcgacg 60
Query: 84 gcagcttaccggtaaaaacnnnnnnnnnnna-catgtctgtggcgtagtttgggtcccgc 142
|||| ||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 61 ccagcgtaccggtaaaaactaattttttacatgttgtctgtggcgtagtttgggtcccgc 120
Query: 143 cttgcatcaactga 156
||||||||||||||
Sbjct: 121 cttgcatcaactga 134
>46666_miR168:micropc
Length = 125
Score = 73.8 bits (37), Expect = 4e-14
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcgggacctacctcgccggcaacaatggcggtagctgacggcgacg 83
||||||||||||||||||||||| |||||||||| |||||| || ||||||||| ||||
Sbjct: 1 tcgcttggtgcaggtcgggacctgcctcgccggcgacaatgacgtcagctgacggtgacg 60
Query: 84 g 84
|
Sbjct: 61 g 61
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 135 ggtcccgccttgcatcaactga 156
||||||||||||||||||||||
Sbjct: 104 ggtcccgccttgcatcaactga 125
>46016_miR168:micropc
Length = 125
Score = 73.8 bits (37), Expect = 4e-14
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcgggacctacctcgccggcaacaatggcggtagctgacggcgacg 83
||||||||||||||||||||||| |||||||||| |||||| || ||||||||| ||||
Sbjct: 1 tcgcttggtgcaggtcgggacctgcctcgccggcgacaatgacgtcagctgacggtgacg 60
Query: 84 g 84
|
Sbjct: 61 g 61
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 135 ggtcccgccttgcatcaactga 156
||||||||||||||||||||||
Sbjct: 104 ggtcccgccttgcatcaactga 125
>46411_miR168:micropc
Length = 145
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcgggacct 46
|||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggacct 23
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 131 tttgggtcccgccttgcatcaactga 156
||||||||| ||||||||||||||||
Sbjct: 120 tttgggtcctgccttgcatcaactga 145
>45240_miR168:micropc
Length = 145
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcgggacct 46
|||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggacct 23
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 131 tttgggtcccgccttgcatcaactga 156
||||||||| ||||||||||||||||
Sbjct: 120 tttgggtcctgccttgcatcaactga 145
>46663_miR168:micropc
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 64 ttggatcccgccttgcatcaactga 88
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>46636_miR168:micropc
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 117 ttggatcccgccttgcatcaactga 141
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>46512_miR168:micropc
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 64 ttggatcccgccttgcatcaactga 88
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>46427_miR168:micropc
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 64 ttggatcccgccttgcatcaactga 88
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>46343_miR168:micropc
Length = 144
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 120 ttggatcccgccttgcatcaactga 144
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>46333_miR168:micropc
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 94 ttggatcccgccttgcatcaactga 118
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>46278_miR168:micropc
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 114 ttggatcccgccttgcatcaactga 138
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>46189_miR168:micropc
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 64 ttggatcccgccttgcatcaactga 88
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>46038_miR168:micropc
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 80 ttggatcccgccttgcatcaactga 104
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>45956_miR168:micropc
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcgggac 44
|||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggac 21
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 76 ttggatcccgccttgcatcaactga 100
>45952_miR168:micropc
Length = 155
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 131 ttggatcccgccttgcatcaactga 155
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>45700_miR168:micropc
Length = 155
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 131 ttggatcccgccttgcatcaactga 155
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>45425_miR168:micropc
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 117 ttggatcccgccttgcatcaactga 141
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>45406_miR168:micropc
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 94 ttggatcccgccttgcatcaactga 118
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>45301_miR168:micropc
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 80 ttggatcccgccttgcatcaactga 104
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>45228_miR168:micropc
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 117 ttggatcccgccttgcatcaactga 141
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>45119_miR168:micropc
Length = 144
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 120 ttggatcccgccttgcatcaactga 144
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>45088_miR168:micropc
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 94 ttggatcccgccttgcatcaactga 118
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>44989_miR168:micropc
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 114 ttggatcccgccttgcatcaactga 138
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>44967_miR168:micropc
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 117 ttggatcccgccttgcatcaactga 141
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>44951_miR168:micropc
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 94 ttggatcccgccttgcatcaactga 118
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>44865_miR168:micropc
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcgggac 44
|||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggac 21
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 ttgggtcccgccttgcatcaactga 156
|||| ||||||||||||||||||||
Sbjct: 76 ttggatcccgccttgcatcaactga 100
>46717_miR168:micropc
Length = 96
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 137 tcccgccttgcatcaactga 156
||||||||||||||||||||
Sbjct: 77 tcccgccttgcatcaactga 96
>46522_miR168:micropc
Length = 110
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 137 tcccgccttgcatcaactga 156
||||||||||||||||||||
Sbjct: 91 tcccgccttgcatcaactga 110
>46406_miR168:micropc
Length = 110
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 137 tcccgccttgcatcaactga 156
||||||||||||||||||||
Sbjct: 91 tcccgccttgcatcaactga 110
>46366_miR168:micropc
Length = 96
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 137 tcccgccttgcatcaactga 156
||||||||||||||||||||
Sbjct: 77 tcccgccttgcatcaactga 96
>46098_miR168:micropc
Length = 101
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 137 tcccgccttgcatcaactga 156
||||||||||||||||||||
Sbjct: 82 tcccgccttgcatcaactga 101
>45758_miR168:micropc
Length = 101
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 137 tcccgccttgcatcaactga 156
||||||||||||||||||||
Sbjct: 82 tcccgccttgcatcaactga 101
