miRNEST 2.0, an integrative microRNA resource :: BLAST
>48560_gma-miR168:pmrd
Length = 125
Score = 172 bits (87), Expect = 6e-44
Identities = 114/123 (92%)
Strand = Plus / Plus
Query: 36 cactgtgcggtctctaattcgcttggtgcaggtcgggaaccggtttctgcgcgaaatggt 95
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 1 cactgtgcggtctctaattcgcttggtgcaggtcgggaaccggttttcgcgcggaatgga 60
Query: 96 gaagtggtagccggcggcgaattggatcccgccttgcatcaactgaatcggaggccgcag 155
| || ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 61 ggagcggtcgccggcgccgaattggatcccgccttgcatcaactgaatcggaggccgcgg 120
Query: 156 tga 158
|||
Sbjct: 121 tga 123
>51650_ptc-miR168a:pmrd
Length = 160
Score = 75.8 bits (38), Expect = 1e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 112 gcgaattggatcccgccttgcatcaactgaatcggagg 149
||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gcgaattggatcccgccttgcatcaactgaatcggagg 160
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 ggtctctaattcgcttggtgcaggtcgggaac 75
||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaac 32
>51651_ptc-miR168b:pmrd
Length = 136
Score = 69.9 bits (35), Expect = 7e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 114 gaattggatcccgccttgcatcaactgaatcggag 148
|||||||||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactgaatcggag 135
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 44 ggtctctaattcgcttggtgcaggtcgggaac 75
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
>54802_vvi-miR168:pmrd
Length = 132
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 44 ggtctctaattcgcttggtgcaggtcgggaaccg 77
||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaaccg 34
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 120 gatcccgccttgcatcaactgaatcggag 148
|||||||||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggag 127
>54388_rco-miR168:pmrd
Length = 156
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 42 gcggtctctaattcgcttggtgcaggtcgggaac 75
||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 114 gaattggatcccgccttgcatcaactgaatcg 145
||||||||||||||||||||||||||||||||
Sbjct: 110 gaattggatcccgccttgcatcaactgaatcg 141
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 116 attggatcccgccttgcatcaactgaatcgga 147
||||||||||||||||||||||||||||||||
Sbjct: 91 attggatcccgccttgcatcaactgaatcgga 122
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 attcgcttggtgcaggtcgggaacc 76
|||||||||||||||||||||||||
Sbjct: 11 attcgcttggtgcaggtcgggaacc 35
>46957_ath-miR168a:pmrd
Length = 138
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 116 attggatcccgccttgcatcaactgaatcgga 147
||||||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatcgga 127
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 attcgcttggtgcaggtcgggaacc 76
|||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaacc 40
>54375_pts-miR168b:pmrd
Length = 140
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 112 gcgaattggatcccgccttgcatcaactga 141
||||||||||||||||||||||||||||||
Sbjct: 111 gcgaattggatcccgccttgcatcaactga 140
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 tcgcttggtgcaggtcgggaac 75
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>54374_pts-miR168a:pmrd
Length = 118
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 114 gaattggatcccgccttgcatcaactga 141
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 tcgcttggtgcaggtcgggaac 75
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>54366_ptr-miR168:pmrd
Length = 118
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 114 gaattggatcccgccttgcatcaactga 141
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 tcgcttggtgcaggtcgggaac 75
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>55000_zma-miR168b:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 119 ggatcccgccttgcatcaactgaatcggag 148
||||||||||||||||||| ||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggag 92
>46959_ath-miR168m:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 116 attggatcccgccttgcatcaactga 141
||||||||||||||||||||||||||
Sbjct: 79 attggatcccgccttgcatcaactga 104
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tcgcttggtgcaggtcgggaacc 76
|||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaacc 23
>46958_ath-miR168b:pmrd
Length = 124
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 42 gcggtctctaattcgcttggtgcaggtcgggaac 75
|||||||| ||||||||||||||||||||||||
Sbjct: 7 gcggtctcggattcgcttggtgcaggtcgggaac 40
>54999_zma-miR168a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 119 ggatcccgccttgcatcaactgaatcggag 148
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>54637_sof-miR168b:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 119 ggatcccgccttgcatcaactgaatcggag 148
||||||||||||||| ||| ||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggag 91
>54636_sof-miR168a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 119 ggatcccgccttgcatcaactgaatcggag 148
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>48873_osa-miR168a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 119 ggatcccgccttgcatcaactgaatcggag 148
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>48872_osa-miR168a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 119 ggatcccgccttgcatcaactgaatcggag 148
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>48871_osa-miR168a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 119 ggatcccgccttgcatcaactgaatcggag 148
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>48649_hte-miR168:pmrd
Length = 140
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 tcgcttggtgcaggtcgggaac 75
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>48349_bna-miR168:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 tcgcttggtgcaggtcgggaac 75
||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39
>54665_stu-miR168:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 117 ttggatcccgccttgcatcaactga 141
|||| ||||||||||||||||||||
Sbjct: 109 ttgggtcccgccttgcatcaactga 133
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tcgcttggtgcaggtcggga 73
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>54546_sly-miR168:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tcgcttggtgcaggtcggga 73
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
