miRNEST 2.0, an integrative microRNA resource :: BLAST
>51593_ptc-miR156c:pmrd
Length = 100
Score = 69.9 bits (35), Expect = 3e-13
Identities = 75/87 (86%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 6 agaaattgacagaagagagtgagcacaaagaggcaca-tgatataactctatatcactgc 64
||||| ||||||||||||||||||||| ||||||| | | ||||| |||||| || |||
Sbjct: 5 agaaactgacagaagagagtgagcacacagaggcatatttgtataaatctataccattgc 64
Query: 65 ttttgtgtgctcactactctttctgtc 91
||||| ||||||||| ||| |||||||
Sbjct: 65 ttttgcgtgctcacttctcattctgtc 91
>51595_ptc-miR156e:pmrd
Length = 100
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 6 agaaattgacagaagagagtgagcacaaagaggca 40
||||||||||||||||||||||||||| |||||||
Sbjct: 5 agaaattgacagaagagagtgagcacacagaggca 39
>54767_vvi-miR156b:pmrd
Length = 102
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacaaagaggca 40
||||||||||||||||||||| |||||||
Sbjct: 11 tgacagaagagagtgagcacacagaggca 39
>46912_ath-miR156c:pmrd
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 6 agaaattgacagaagagagtgagcacaaagaggcac 41
||||| ||||||||||||||||||||| | ||||||
Sbjct: 6 agaaactgacagaagagagtgagcacacaaaggcac 41
>54914_zma-miR156d:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 attgacagaagagagtgagcaca 32
|||||||||||||||||||||||
Sbjct: 14 attgacagaagagagtgagcaca 36
>48804_osa-miR156d:pmrd
Length = 129
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 attgacagaagagagtgagcaca 32
|||||||||||||||||||||||
Sbjct: 18 attgacagaagagagtgagcaca 40
>46913_ath-miR156d:pmrd
Length = 118
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 agaaattgacagaagagagtgagcaca 32
|||| ||||||||||||||||||||||
Sbjct: 12 agaagttgacagaagagagtgagcaca 38
>46910_ath-miR156a:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 agaaattgacagaagagagtgagcaca 32
||||| |||||||||||||||||||||
Sbjct: 15 agaaactgacagaagagagtgagcaca 41
>54912_zma-miR156b:pmrd
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttgacagaagagagtgagcaca 32
||||||||||||||||||||||
Sbjct: 20 ttgacagaagagagtgagcaca 41
>54758_tre-miR156:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttgacagaagagagtgagcaca 32
||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagtgagcaca 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 68 tgtgtgctcactactctttctgtc 91
|||||||||||| |||||||||||
Sbjct: 60 tgtgtgctcactcctctttctgtc 83
>54402_sbi-miR157:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttgacagaagagagtgagcaca 32
||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagtgagcaca 22
>52469_ptc-miRf10647-akr:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ttgacagaagagagtgagcaca 32
||||||||||||||||||||||
Sbjct: 94 ttgacagaagagagtgagcaca 73
>51594_ptc-miR156d:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttgacagaagagagtgagcaca 32
||||||||||||||||||||||
Sbjct: 10 ttgacagaagagagtgagcaca 31
>48810_osa-miR156j:pmrd
Length = 165
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttgacagaagagagtgagcaca 32
||||||||||||||||||||||
Sbjct: 41 ttgacagaagagagtgagcaca 62
>48808_osa-miR156h:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttgacagaagagagtgagcaca 32
||||||||||||||||||||||
Sbjct: 8 ttgacagaagagagtgagcaca 29
>48806_osa-miR156f:pmrd
Length = 186
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttgacagaagagagtgagcaca 32
||||||||||||||||||||||
Sbjct: 3 ttgacagaagagagtgagcaca 24
>48491_ghr-miR156d:pmrd
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttgacagaagagagtgagcaca 32
||||||||||||||||||||||
Sbjct: 8 ttgacagaagagagtgagcaca 29
>47667_ath-miRf10567-akr:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttgacagaagagagtgagcaca 32
||||||||||||||||||||||
Sbjct: 5 ttgacagaagagagtgagcaca 26
>54924_zma-miR156o:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>54923_zma-miR156n:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>54922_zma-miR156m:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>54919_zma-miR156i:pmrd
Length = 117
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 13 tgacagaagagagtgagcaca 33
>54918_zma-miR156h:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcaca 40
>54915_zma-miR156e:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcaca 40
>54913_zma-miR156c:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcaca 41
>54911_zma-miR156a:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 18 tgacagaagagagtgagcaca 38
>54769_vvi-miR156d:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcaca 31
>54768_vvi-miR156c:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcaca 31
>54656_stu-miR156a:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>54401_sbi-miR156i:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcaca 23
>54400_sbi-miR156h:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcaca 22
>54399_sbi-miR156g:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcaca 22
>54395_sbi-miR156c:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>54394_sbi-miR156b:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>54393_sbi-miR156a:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>53789_ptc-miRf11967-akr:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcaca 23
>51926_ptc-miRf10104-akr:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 8 tgacagaagagagtgagcaca 28
>51596_ptc-miR156f:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcaca 31
>51592_ptc-miR156b:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcaca 31
>51591_ptc-miR156a:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcaca 31
>51357_ppt-miR156c:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 10 tgacagaagagagtgagcaca 30
>51355_ppt-miR156a:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcaca 41
>51354_ppr-miR156:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcaca 22
>49442_osa-miRf10227-akr:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 89 tgacagaagagagtgagcaca 69
>49326_osa-miRf10111-akr:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 7 tgacagaagagagtgagcaca 27
>48815_osa-miR156o:pmrd
Length = 179
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 attgacagaagagagtgagca 30
|||||||||||||||||||||
Sbjct: 158 attgacagaagagagtgagca 178
>48813_osa-miR156m:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>48809_osa-miR156i:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcaca 23
>48807_osa-miR156g:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 4 tgacagaagagagtgagcaca 24
>48805_osa-miR156e:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 10 tgacagaagagagtgagcaca 30
>48803_osa-miR156c:pmrd
Length = 149
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 29 tgacagaagagagtgagcaca 49
>48802_osa-miR156b:pmrd
Length = 176
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 43 tgacagaagagagtgagcaca 63
>48801_osa-miR156a:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 7 tgacagaagagagtgagcaca 27
>48795_oru-miR156:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcaca 22
>48652_hvv-miR156a:pmrd
Length = 394
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>48528_gma-miR156a:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcaca 41
>48489_ghr-miR156b:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcaca 23
>48488_ghr-miR156a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 9 tgacagaagagagtgagcaca 29
>48425_cpt-miR156a:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcaca 31
>48336_bna-miR156a:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>48248_ath-miRf11148-akr:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 96 tgacagaagagagtgagcaca 76
>48243_ath-miRf11143-akr:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 90 tgacagaagagagtgagcaca 70
>47357_ath-miRf10257-akr:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcaca 23
>47356_ath-miRf10256-akr:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcaca 23
>46915_ath-miR156f:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcaca 41
>46914_ath-miR156e:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 7 tgacagaagagagtgagcaca 27
>46911_ath-miR156b:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 47 tgacagaagagagtgagcaca 67
