miRNEST 2.0, an integrative microRNA resource :: BLAST
>41578_vvi-MIR162:mirbase
Length = 103
Score = 77.8 bits (39), Expect = 2e-15
Identities = 90/105 (85%), Gaps = 4/105 (3%)
Strand = Plus / Plus
Query: 26 tgaagtcactggaggcaacggttcatcgatctcttcctgaatttggctgtggaatcatac 85
||||||||||||| ||| ||||||||||||||||||||||| ||| |||| || |
Sbjct: 1 tgaagtcactggatgcagcggttcatcgatctcttcctgaaattgt-tgtgaaaaaag-- 57
Query: 86 acaaagcaagaatcggtcgataaacctctgcatccagcgctcact 130
|| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 58 -cagatcaagaatcggtcgataaacctctgcatccagcgttcact 101
>40663_mtr-MIR162:mirbase
Length = 124
Score = 75.8 bits (38), Expect = 9e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 95 gaatcggtcgataaacctctgcatccagcgctcacttt 132
||||||||||||||||||||||||||||||||||||||
Sbjct: 80 gaatcggtcgataaacctctgcatccagcgctcacttt 117
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 73.8 bits (37), Expect = 4e-14
Identities = 86/99 (86%), Gaps = 5/99 (5%)
Strand = Plus / Plus
Query: 28 aagtcactggaggcaacggttcatcgatctcttcct--gaatttggctgtggaatcatac 85
||||||||||||||| |||||||||||||||||||| |||||||| |||| || | |
Sbjct: 7 aagtcactggaggcagcggttcatcgatctcttcctgggaatttgg-tgtgaaa--aatc 63
Query: 86 acaaagcaagaatcggtcgataaacctctgcatccagcg 124
||| | || |||||| |||||||||||||||||||||||
Sbjct: 64 acagaacatgaatcgatcgataaacctctgcatccagcg 102
>40437_gma-MIR162:mirbase
Length = 102
Score = 69.9 bits (35), Expect = 6e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 25 gtgaagtcactggaggcaacggttcatcgatctcttcctgaat 67
|||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 1 gtgaagtcactggatgcagcggttcatcgatctcttcctgaat 43
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 95 gaatcggtcgataaacctctgcatccagcgctcact 130
|||||| |||||||||||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatccagcgctcact 101
>40025_ath-MIR162b:mirbase
Length = 111
Score = 69.9 bits (35), Expect = 6e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 88 aaagcaagaatcggtcgataaacctctgcatccagcgct 126
||||||||||||| |||||||||||||||||||||||||
Sbjct: 65 aaagcaagaatcgatcgataaacctctgcatccagcgct 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 25 gtgaagtcactggaggcaacggttcatcgatc 56
|||||||| ||||||||| |||||||||||||
Sbjct: 3 gtgaagtcgctggaggcagcggttcatcgatc 34
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 67.9 bits (34), Expect = 2e-12
Identities = 84/97 (86%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 32 cactggaggcaacggttcatcgatctcttcct--gaatttggctgtg-gaatcatacaca 88
||||||||||| |||||||||||||||||||| |||||| | |||| |||| | ||| |
Sbjct: 22 cactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacaca-a 80
Query: 89 aagcaagaatcggtcgataaacctctgcatccagcgc 125
| || |||||| ||||||||||||||||||||||||
Sbjct: 81 atacatgaatcgatcgataaacctctgcatccagcgc 117
>41220_csi-MIR162:mirbase
Length = 201
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 95 gaatcggtcgataaacctctgcatccagcgctcact 130
|||||| |||||||||||||||||||||||||||||
Sbjct: 154 gaatcgatcgataaacctctgcatccagcgctcact 189
>39813_aly-MIR162b:mirbase
Length = 184
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 88 aaagcaagaatcggtcgataaacctctgcatccagcgct 126
|||||| |||||| |||||||||||||||||||||||||
Sbjct: 99 aaagcatgaatcgatcgataaacctctgcatccagcgct 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 25 gtgaagtcactggaggcaacggttcatcgatc 56
|||||||| ||||||||| |||||||||||||
Sbjct: 41 gtgaagtcgctggaggcagcggttcatcgatc 72
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 27 gaagtcactggaggcaacggttcatcgatctcttcctg 64
|||| ||||||||||| |||||||||||||||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatctcttcctg 41
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 102 tcgataaacctctgcatccagcgct 126
|||||||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccagcgct 102
>40342_rco-MIR162:mirbase
Length = 101
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 31 tcactggaggcaacggttcatcgatctcttcctg 64
|||||||||||| |||||||||||||||||||||
Sbjct: 1 tcactggaggcagcggttcatcgatctcttcctg 34
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 95 gaatcggtcgataaacctctgcatccagcgct 126
|||||| |||||||||||||||||||||||||
Sbjct: 69 gaatcgatcgataaacctctgcatccagcgct 100
>41090_tcc-MIR162:mirbase
Length = 131
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 32 cactggaggcaacggttcatcgatctcttcctg 64
||||||||||| |||||||||||||||||||||
Sbjct: 19 cactggaggcagcggttcatcgatctcttcctg 51
>42708_zma-MIR162:mirbase
Length = 130
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 95 gaatcggtcgataaacctctgcatccag 122
||||||||||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 95 gaatcggtcgataaacctctgcatccag 122
||||||||||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 27 gaagtcactggaggcaacggttcatcgatctcttcctgaa 66
|||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tcgataaacctctgcatccag 122
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 27 gaagtcactggaggcaacggttcatcgatctcttcctgaa 66
|||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tcgataaacctctgcatccag 122
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>40024_ath-MIR162a:mirbase
Length = 140
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 29 agtcactggaggcaacggttcatcgatctcttcctg 64
|||| ||||||||| |||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 88 aaagcaagaatcggtcgataaacctctgcatccagcg 124
|||||| |||| | |||||||||||||||||||||||
Sbjct: 75 aaagcatgaatagatcgataaacctctgcatccagcg 111
>39812_aly-MIR162a:mirbase
Length = 228
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 29 agtcactggaggcaacggttcatcgatctcttcctg 64
|||| ||||||||| |||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatctcttcctg 98
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 88 aaagcaagaatcggtcgataaacctctgcatccagcg 124
|||||| |||| | |||||||||||||||||||||||
Sbjct: 122 aaagcatgaatagatcgataaacctctgcatccagcg 158
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 95 gaatcggtcgataaacctctgcatccag 122
|||||| |||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 95 gaatcggtcgataaacctctgcatccag 122
|||||| |||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41930_osa-MIR162b:mirbase
Length = 134
Score = 46.1 bits (23), Expect = 8e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 86 acaaagcaagaatcggtcgataaacctctgcatccagcgctcacttt 132
|||| ||| |||||| ||||||| ||||||||||||| ||||||||
Sbjct: 88 acaacgcaggaatcgatcgataagcctctgcatccagatctcacttt 134
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 95 gaatcggtcgataaacctctgcatcc 120
|||||| |||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
