miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00677;MIR168;ABXC01002411.1/32850-32747 4558:Sorghum bicolor
(sorghum)
Length = 104
Score = 109 bits (55), Expect = 6e-24
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 6 tcgggttcgcttggtgcaaatcgggacctgcggccctgctcggaccggacagatcccacc 65
||||| |||||||||||| |||||||||||| ||| ||||||||| ||||||||||| ||
Sbjct: 13 tcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatcccgcc 72
Query: 66 ttgcaccaagggaatccgagccg 88
|||||||||| ||||||||||||
Sbjct: 73 ttgcaccaagtgaatccgagccg 95
>RF00677;MIR168;BT069329.1/34-135 4577:Zea mays
Length = 102
Score = 56.0 bits (28), Expect = 8e-08
Identities = 70/83 (84%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 6 tcgggttcgcttggtgcaaatcgggacctgcggccctgctcggaccggacagatcccacc 65
||||| |||||||||||| ||||||||| || |||| || ||| |||| |||||| ||
Sbjct: 13 tcgggctcgcttggtgcagatcgggacccgccgcccggcc--gacgggacggatcccgcc 70
Query: 66 ttgcaccaagggaatccgagccg 88
|||||||||| ||||| ||||||
Sbjct: 71 ttgcaccaagtgaatcggagccg 93
