miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P37825|YCX5_CHLRE Uncharacterized 11.4 kDa protein in trnR-chlB
intergenic region OS=Chlamydomonas reinhardtii PE=4 SV=1
Length = 101
Score = 40.8 bits (94), Expect(2) = 8e-05
Identities = 20/32 (62%), Positives = 23/32 (71%), Gaps = 4/32 (12%)
Frame = -3
Query: 146 INFSGQIYLLLPANCRYLY----TRQWRYHCH 63
IN SGQIYLLLP + Y+ TRQW+YHCH
Sbjct: 24 INISGQIYLLLPPS-EYINIGFNTRQWQYHCH 54
Score = 24.6 bits (52), Expect(2) = 8e-05
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2
Query: 84 AVAVPLPLIFIFP*G 40
AVAVPLPL FI P G
Sbjct: 67 AVAVPLPLKFICPKG 81
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q6AYI2|KLDC3_RAT Kelch domain-containing protein 3 OS=Rattus
norvegicus GN=Klhdc3 PE=2 SV=1
Length = 382
Score = 53.9 bits (128), Expect = 3e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 2 VNHASVVVGEFIYSFGGYCTGEDYHSNSAIDVHV 103
VNHA+V VG +YSFGGYC+GEDY + IDVH+
Sbjct: 15 VNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHI 48
>sp|Q8VEM9|KLDC3_MOUSE Kelch domain-containing protein 3 OS=Mus
musculus GN=Klhdc3 PE=2 SV=1
Length = 382
Score = 53.9 bits (128), Expect = 3e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 2 VNHASVVVGEFIYSFGGYCTGEDYHSNSAIDVHV 103
VNHA+V VG +YSFGGYC+GEDY + IDVH+
Sbjct: 15 VNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHI 48
>sp|Q9BQ90|KLDC3_HUMAN Kelch domain-containing protein 3 OS=Homo
sapiens GN=KLHDC3 PE=1 SV=1
Length = 382
Score = 53.9 bits (128), Expect = 3e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 2 VNHASVVVGEFIYSFGGYCTGEDYHSNSAIDVHV 103
VNHA+V VG +YSFGGYC+GEDY + IDVH+
Sbjct: 15 VNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHI 48
>sp|Q58CV6|KLDC3_BOVIN Kelch domain-containing protein 3 OS=Bos
taurus GN=KLHDC3 PE=2 SV=2
Length = 382
Score = 53.9 bits (128), Expect = 3e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 2 VNHASVVVGEFIYSFGGYCTGEDYHSNSAIDVHV 103
VNHA+V VG +YSFGGYC+GEDY + IDVH+
Sbjct: 15 VNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHI 48
