miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 165 bits (83), Expect = 3e-40
Identities = 110/119 (92%)
Strand = Plus / Minus
Query: 24 tctactccctccgttcctaaatataagtctttttagagatttcactaggagactacatac 83
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 166 tctactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatac 107
Query: 84 ggagcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagtct 142
|||||||||||| |||||||| | |||||||||||| ||||||||| || |||||||||
Sbjct: 106 ggagcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtct 48
Score = 97.6 bits (49), Expect = 6e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
|||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttcactagtagactacattcgg 60
Query: 86 a 86
|
Sbjct: 61 a 61
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 174 tatttaggaacggagggagtag 195
||||||||||||||||||||||
Sbjct: 144 tatttaggaacggagggagtag 165
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 151 bits (76), Expect = 5e-36
Identities = 106/116 (91%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
||||||||||||||||||||||||||||||| || ||||||||||| | ||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgg 60
Query: 86 agcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagtc 141
|||||||||| ||||| ||||||||||| ||||| ||||||||| |||||||||||
Sbjct: 61 agcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagtc 116
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 25 ctactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacg 84
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 165 ctactccctccgttcctaaatataagtctttgtagagatttcactaatggactacatacg 106
Query: 85 ga 86
||
Sbjct: 105 ga 104
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 149 bits (75), Expect = 2e-35
Identities = 105/115 (91%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
||||||||||||||| ||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 163 tactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatacgg 104
Query: 86 agcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagt 140
|||||||||| |||||||| |||||||||||||| ||| ||||| ||||||||||
Sbjct: 103 agcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagt 49
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatataagtctttttagagatt 64
||||||||||||||||||||||||| | |||||||||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagatt 39
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 135 bits (68), Expect = 3e-31
Identities = 105/116 (90%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
||||||||| ||||||||||||||||||||||||||||| | || | ||||||||||||
Sbjct: 5 tactccctctgttcctaaatataagtctttttagagattctaatatg-gactacatacgg 63
Query: 86 agcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagtc 141
|||||||||| |||||||||||||||||||| || ||||| ||| |||||||||||
Sbjct: 64 agcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtc 119
Score = 81.8 bits (41), Expect = 4e-15
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
|||||||||||||||||||||||||||||||||||||||| | || | ||||||||||||
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagatttgaatatg-gactacatacgg 108
Query: 86 a 86
|
Sbjct: 107 a 107
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 133 bits (67), Expect = 1e-30
Identities = 103/115 (89%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
||||||||||||||| ||||||||| | |||||| |||||||||| |||||||||||||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 107
Query: 86 agcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagt 140
|||||||||| ||||||| |||||||||||||| ||| ||||| ||||||||||
Sbjct: 106 agcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagt 52
Score = 63.9 bits (32), Expect = 9e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 25 ctactccctccgttcctaaatataagtctttttagagatt 64
|||||||||||||||||||||||||| | |||||||||||
Sbjct: 3 ctactccctccgttcctaaatataagaccttttagagatt 42
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 123 bits (62), Expect = 1e-27
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
|||||||||||||||||||||||||||| | |||||||||||||| | |||||||||||
Sbjct: 161 tactccctccgttcctaaatataagtctctgtagagatttcactatg-gactacatacga 103
Query: 86 agcaaaatgaatgaatctacactctaaaat 115
|||||||||| |||||||||||||||||||
Sbjct: 102 agcaaaatgagtgaatctacactctaaaat 73
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcacta 70
|||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 5 tactccctccgttcctaaatataagtctttgtagagattccacta 49
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 119 bits (60), Expect = 2e-26
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
|||||||||||||||||||| |||||||||||||||||||| ||| | | ||||||| ||
Sbjct: 3 tactccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacatatgg 62
Query: 86 agcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagtc 141
|||||||||| ||||||| ||||| || ||||| ||||||||| |||||||||||
Sbjct: 63 agcaaaatgagtgaatctgtactct-aagtatgtctatatacatccgtatgtagtc 117
Score = 97.6 bits (49), Expect = 6e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttcactaggggactacatacgg 106
Query: 86 a 86
|
Sbjct: 105 a 105
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 115 bits (58), Expect = 3e-25
Identities = 74/78 (94%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttttagagattacactatg-gactacatacgg 63
Query: 86 agcaaaatgaatgaatct 103
|||||||||| |||||||
Sbjct: 64 agcaaaatgagtgaatct 81
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 30 ccctccgttcctaaatataagtctttttagagatt 64
||||||||||||||||||||||| |||||||||||
Sbjct: 111 ccctccgttcctaaatataagtccttttagagatt 77
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 107 bits (54), Expect = 6e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
||||||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||
Sbjct: 151 tactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacgg 92
Query: 86 agcaaaatga 95
||||||||||
Sbjct: 91 agcaaaatga 82
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatataagtcttt 55
||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 103 bits (52), Expect = 1e-21
Identities = 101/116 (87%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 25 ctactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacg 84
|||||||||||||||||||||||||| | ||||| | ||||||||| ||||||||||||
Sbjct: 164 ctactccctccgttcctaaatataagaccttttacaaatttcactat-agactacatacg 106
Query: 85 gagcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagt 140
||||||||||| ||||| |||| | |||||||| || |||||| ||||||||||
Sbjct: 105 gagcaaaatgagtgaatttacatcccaaaatatgactacatacatccgtatgtagt 50
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 25 ctactccctccgttcctaaatataagtctttttagagatttcacta 70
|||||||||||||||||||||||||| | |||||||||| ||||||
Sbjct: 1 ctactccctccgttcctaaatataagaccttttagagatctcacta 46
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 174 tatttaggaacggagggagtagt 196
|||||||||||||||||||||||
Sbjct: 143 tatttaggaacggagggagtagt 165
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 101 bits (51), Expect = 4e-21
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 25 ctactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacg 84
||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||
Sbjct: 4 ctactccctccgttcctaaatataagtctttggagagatttcacta-tagaccacatacg 62
Query: 85 gagcaaaatgaatgaatctacac 107
||| ||||||| |||||||||||
Sbjct: 63 gagaaaaatgagtgaatctacac 85
Score = 63.9 bits (32), Expect = 9e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcact 69
||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 165 tactccctccgttcctaaatataagtcttcgtagatatttcact 122
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 174 tatttaggaacggagggagtagt 196
|||||||||||||||||||||||
Sbjct: 25 tatttaggaacggagggagtagt 3
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 95.6 bits (48), Expect = 2e-19
Identities = 100/116 (86%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 25 ctactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacg 84
|||||||||||||||||||||||||| | ||||||| ||| |||| | |||||||||||
Sbjct: 4 ctactccctccgttcctaaatataagaccttttagaaattctactatg-gactacatacg 62
Query: 85 gagcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagt 140
|| ||||| ||| || ||| || ||||||||||| ||||||||| ||||||||||
Sbjct: 63 gaacaaaacaaataaacctataccctaaaatatgtctatatacatccgtatgtagt 118
Score = 58.0 bits (29), Expect = 5e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
||||||||||||||||||||||||| | |||||| ||| ||||| || |||||||||||
Sbjct: 166 tactccctccgttcctaaatataagaccttttaggtattacactatga-actacatacgg 108
Query: 86 a 86
|
Sbjct: 107 a 107
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 174 tatttaggaacggagggagtagtt 197
||||||||||||||||||||||||
Sbjct: 25 tatttaggaacggagggagtagtt 2
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
|||||||||||| | |||||||||||||||| ||| ||||||||||| | ||||||||||
Sbjct: 5 tactccctccgtacttaaatataagtcttttaagatatttcactaggtgtctacatacgg 64
Query: 86 agcaaaat 93
||||||||
Sbjct: 65 agcaaaat 72
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataagtcttt 55
||||||||||||||||||||||||||||||
Sbjct: 138 tactccctccgttcctaaatataagtcttt 109
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 83.8 bits (42), Expect = 9e-16
Identities = 79/90 (87%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
|||||||||||||||||||||||||||||| | |||||||| || | ||| ||||||||
Sbjct: 2 tactccctccgttcctaaatataagtctttggacagatttcattatg-gaccacatacgg 60
Query: 86 agcaaaatgaatgaatctacactctaaaat 115
|| ||||||| |||| ||| ||||||||||
Sbjct: 61 agtaaaatgagtgaacctatactctaaaat 90
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcacta 70
|||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 163 tactccctccattcctaaatataagtctttgtagagatttcacta 119
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 79.8 bits (40), Expect = 1e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
|||||||||| ||||||||||||||||||| || ||||||||||| | |||||||||||
Sbjct: 5 tactccctcctttcctaaatataagtctttctaaagatttcactacg-gactacatacga 63
Query: 86 agcaaaatgaatgaat 101
|| ||||||||||||
Sbjct: 64 agtgaaatgaatgaat 79
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 25 ctactccctccgttcctaaatataag 50
||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgttcctaaatataag 29
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 174 tatttaggaacggagggagtag 195
||||||||||||||||||||||
Sbjct: 25 tatttaggaacggagggagtag 4
>RF00906;MIR1122;EU730896.1/84586-84679 15368:Brachypodium
distachyon
Length = 94
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 171 aagtatttaggaacggagggagtag 195
|||||||||||||||||||||||||
Sbjct: 67 aagtatttaggaacggagggagtag 91
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 22 cttctactccctccgttcctaaata 46
|||||||||||||||||||||||||
Sbjct: 94 cttctactccctccgttcctaaata 70
>RF00906;MIR1122;AAAA02006463.1/56610-56765 39946:Oryza sativa
Indica Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 22 cttctactccctccgttcctaaatataag 50
|||||||||||||||| ||||||||||||
Sbjct: 1 cttctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatataag 50
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataag 50
|||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataag 52
>RF00906;MIR1122;DQ537335.1/79725-79622 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 171 aagtatttaggaacggagggagta 194
||||||||||||||||||||||||
Sbjct: 77 aagtatttaggaacggagggagta 100
>RF00906;MIR1122;EU730901.1/155966-155873 15368:Brachypodium
distachyon
Length = 94
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 171 aagtatttaggaacggagggagta 194
||||||||||||||||||||||||
Sbjct: 28 aagtatttaggaacggagggagta 5
>RF00906;MIR1122;EU730899.1/47735-47828 15368:Brachypodium
distachyon
Length = 94
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 171 aagtatttaggaacggagggagta 194
||||||||||||||||||||||||
Sbjct: 67 aagtatttaggaacggagggagta 90
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataa 49
||||||||||||||||||||||||
Sbjct: 115 tactccctccgttcctaaatataa 92
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 27 actccctccgttcctaaatataag 50
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 ctactccctccgttcctaaatataagt 51
|||||||||||||||| ||||||||||
Sbjct: 4 ctactccctccgttccaaaatataagt 30
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatata 48
|||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatata 67
>RF00906;MIR1122;AACV01007836.1/7963-7867 39947:Oryza sativa
Japonica Group
Length = 97
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 24 tctactccctccgttcctaaatataag 50
|||||||||||||| ||||||||||||
Sbjct: 95 tctactccctccgtccctaaatataag 69
>RF00906;MIR1122;AACV01005168.1/9233-9388 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 24 tctactccctccgttcctaaatataag 50
|||||||||||||| ||||||||||||
Sbjct: 3 tctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP004178.3/74526-74681 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 24 tctactccctccgttcctaaatataag 50
|||||||||||||| ||||||||||||
Sbjct: 3 tctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatata 48
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatata 27
>RF00906;MIR1122;AACV01017146.1/25916-25760 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 24 tctactccctccgttcctaaatataag 50
|||||||||||||| ||||||||||||
Sbjct: 155 tctactccctccgtccctaaatataag 129
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatat 47
||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatat 47
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatat 47
||||||||||||||||||||||
Sbjct: 238 tactccctccgttcctaaatat 217
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatat 47
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatat 47
||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 169 tgaagtatttaggaacggagggagta 194
|||| |||||||||||||||||||||
Sbjct: 27 tgaaatatttaggaacggagggagta 2
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatat 47
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatat 47
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatat 47
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;EU282260.1/1308-1219 97361:Hordeum murinum
Length = 90
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 171 aagtatttaggaacggagggagtagt 196
|||||||||||||| |||||||||||
Sbjct: 28 aagtatttaggaacagagggagtagt 3
>RF00906;MIR1122;AC135958.2/60124-60233 39947:Oryza sativa Japonica
Group
Length = 110
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 25 ctactccctccgttcctaaatataag 50
||||||||||||| ||||||||||||
Sbjct: 107 ctactccctccgtccctaaatataag 82
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 25 ctactccctccgttcctaaatataag 50
||||||||||||| ||||||||||||
Sbjct: 153 ctactccctccgtccctaaatataag 128
>RF00906;MIR1122;AAAA02028211.1/1243-1359 39946:Oryza sativa
Indica Group
Length = 117
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 25 ctactccctccgttcctaaatataag 50
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 25 ctactccctccgttcctaaatataag 50
||||||||||||| ||||||||||||
Sbjct: 112 ctactccctccgtccctaaatataag 87
>RF00906;MIR1122;AC136448.2/118247-118097 39947:Oryza sativa
Japonica Group
Length = 151
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 25 ctactccctccgttcctaaatataag 50
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AC210491.1/95749-95858 4538:Oryza glaberrima
(African rice)
Length = 110
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataagtctttttag 59
|||||||||||| || |||||||||| |||||||
Sbjct: 106 tactccctccgtcccaaaatataagtatttttag 73
>RF00906;MIR1122;AACV01023423.1/18495-18379 39947:Oryza sativa
Japonica Group
Length = 117
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 25 ctactccctccgttcctaaatataag 50
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP004994.2/69469-69314 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 25 ctactccctccgttcctaaatataag 50
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01023551.1/12075-12186 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatataagtctttttag 59
|||||||||||| || |||||||||| |||||||
Sbjct: 5 tactccctccgtcccaaaatataagtatttttag 38
>RF00906;MIR1122;AAAA02026408.1/56455-56566 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatataagtctttttag 59
|||||||||||||| |||||||||| |||||||
Sbjct: 5 tactccctccgttctaaaatataagtatttttag 38
>RF00906;MIR1122;AC120985.3/48011-47950 39947:Oryza sativa
Japonica Group
Length = 62
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 25 ctactccctccgttcctaaatataag 50
||||||||||||| ||||||||||||
Sbjct: 59 ctactccctccgtccctaaatataag 34
>RF00906;MIR1122;AP003258.3/44726-44846 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 25 ctactccctccgttcctaaatataag 50
||||| ||||||||||||||||||||
Sbjct: 4 ctacttcctccgttcctaaatataag 29
>RF00906;MIR1122;AAAA02028032.1/2328-2217 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 22 cttctactccctccgttcctaaatataagtctttttag 59
|||||||||||||||| || ||||||||| |||||||
Sbjct: 112 cttctactccctccgtcccaaaatataagcatttttag 75
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataagt 51
|||||||||||| |||||||||||||
Sbjct: 130 tactccctccgtccctaaatataagt 105
>RF00906;MIR1122;AAAA02018670.1/1486-1331 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 25 ctactccctccgttcctaaatataag 50
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02019543.1/35421-35577 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 25 ctactccctccgttcctaaatataag 50
||||||||||||| ||||||||||||
Sbjct: 154 ctactccctccgtccctaaatataag 129
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataagt 51
||||| ||||||||||||||||||||
Sbjct: 146 tactcactccgttcctaaatataagt 121
>RF00906;MIR1122;AACV01003040.1/15315-15426 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataagtctttttag 59
|||||||||||| || |||||||||| |||||||
Sbjct: 108 tactccctccgtcccaaaatataagtatttttag 75
>RF00906;MIR1122;AACV01012007.1/47065-46909 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 25 ctactccctccgttcctaaatataag 50
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP008208.1/1673372-1673471 39947:Oryza sativa
Japonica Group
Length = 100
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 26 tactccctccgttcctaaatataagtctttttag 59
|||||||||||| || |||||||||| |||||||
Sbjct: 96 tactccctccgtcccaaaatataagtatttttag 63
>RF00906;MIR1122;AAAA02018654.1/14883-14772 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 26 tactccctccgttcctaaatataagtctttttag 59
|||||||||||| || |||||||||| |||||||
Sbjct: 5 tactccctccgtcccaaaatataagtatttttag 38
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa Japonica
Group
Length = 132
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 25 ctactccctccgttcctaaatataag 50
||||||||||||| ||||||||||||
Sbjct: 129 ctactccctccgtccctaaatataag 104
