miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01960;SSU_rRNA_eukarya;AAYZ01438197.1/1-1685 9978:Ochotona
princeps (American pika)
Length = 1685
Score = 161 bits (81), Expect = 3e-39
Identities = 119/131 (90%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 1 ggcgtacggaagacccactccccggcgccgctcgtnnnnnnncccaagtccttctgatcg 60
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 298 ggcgtacggaagccccactccccggcgccgctcgtgggggg-cccaagtccttctgatcg 240
Query: 61 aggcccagcccgtggacggtgtgaggccggtaacaggaccccggcgcgccgggtccgggt 120
|||||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||
Sbjct: 239 aggcccagcccgtggacggtgtgaggccggtagc-ggcccccggcgcgccgggcccgggt 181
Query: 121 cttcccggagt 131
|||||||||||
Sbjct: 180 cttcccggagt 170
