miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00223;IRES_Bip;AAKN02015734.1/27187-26943 10141:Cavia porcellus
(domestic guinea pig)
Length = 245
Score = 73.8 bits (37), Expect = 2e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 16 ggccagcctgggctacaaagtgagttcaaggccagcctgaa 56
|||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 ggccagcctgggctacaaagtgagttcaaggccaacctgaa 41
>RF00004;U2;AAKN02021208.1/23397-23602 10141:Cavia porcellus
(domestic guinea pig)
Length = 206
Score = 46.1 bits (23), Expect = 5e-05
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 18 ccagcctgggctacaaagtgagttcaaggccagcctgaactgcatag 64
||||||||||| ||||||| || |||||||| ||| ||||||||||
Sbjct: 166 ccagcctgggccacaaagtaagctcaaggcctgcccaaactgcatag 120
>RF00019;Y_RNA;AAKN02024899.1/60134-60231 10141:Cavia porcellus
(domestic guinea pig)
Length = 98
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 45 ggccagcctgaactgcatagt 65
|||||||||||||||||||||
Sbjct: 1 ggccagcctgaactgcatagt 21
