miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46679_miR1439:micropc
          Length = 97

 Score =  137 bits (69), Expect = 2e-33
 Identities = 91/97 (93%), Gaps = 1/97 (1%)
 Strand = Plus / Minus

                                                                       
Query: 11  tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaat 70
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 97  tactccctccgttccaaaataagtgtctcaagcttagtacaattttatactagagctagt 38

                                                
Query: 71  acaaagttg-gacacttattttgggacggagggagta 106
           ||||||||| |||| |||||||| |||||||||||||
Sbjct: 37  acaaagttgagacagttattttgagacggagggagta 1



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
          ||||||||||||| |||||||| ||||||||
Sbjct: 1  tactccctccgtctcaaaataactgtctcaa 31



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 80  gacacttattttgggacggagggagta 106
           |||||||||||||| ||||||||||||
Sbjct: 71  gacacttattttggaacggagggagta 97




>45970_miR1439:micropc
          Length = 99

 Score = 89.7 bits (45), Expect = 4e-19
 Identities = 85/97 (87%), Gaps = 1/97 (1%)
 Strand = Plus / Plus

                                                                       
Query: 11  tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaat 70
           |||||||||||||||||||||||| ||| ||||||| || || ||| ||||||  ||| |
Sbjct: 2   tactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctagt 61

                                                
Query: 71  acaaagttg-gacacttattttgggacggagggagta 106
           |||||||||  ||| ||||||||||||||||||||||
Sbjct: 62  acaaagttgatacagttattttgggacggagggagta 98



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 83  acttattttgggacggagggagta 106
           ||||||||||||||||||||||||
Sbjct: 25  acttattttgggacggagggagta 2



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                          
Query: 10 atactccctccgtcccaaaataagtgtctcaa 41
          ||||||||||||||||||||||| ||| ||||
Sbjct: 99 atactccctccgtcccaaaataactgtatcaa 68




>45205_miR1439:micropc
          Length = 99

 Score = 89.7 bits (45), Expect = 4e-19
 Identities = 85/97 (87%), Gaps = 1/97 (1%)
 Strand = Plus / Plus

                                                                       
Query: 11  tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaat 70
           |||||||||||||||||||||||| ||| ||||||| || || ||| ||||||  ||| |
Sbjct: 2   tactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctagt 61

                                                
Query: 71  acaaagttg-gacacttattttgggacggagggagta 106
           |||||||||  ||| ||||||||||||||||||||||
Sbjct: 62  acaaagttgatacagttattttgggacggagggagta 98



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 83  acttattttgggacggagggagta 106
           ||||||||||||||||||||||||
Sbjct: 25  acttattttgggacggagggagta 2



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                          
Query: 10 atactccctccgtcccaaaataagtgtctcaa 41
          ||||||||||||||||||||||| ||| ||||
Sbjct: 99 atactccctccgtcccaaaataactgtatcaa 68




>46048_miR1439:micropc
          Length = 58

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                         
Query: 10 atactccctccgtcccaaaataagtgtctca 40
          |||||||||||||||||||||||||| ||||
Sbjct: 57 atactccctccgtcccaaaataagtgactca 27



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 82  cacttattttgggacggagggagta 106
           |||||||||||||||||||||||||
Sbjct: 32  cacttattttgggacggagggagta 56




>45320_miR1439:micropc
          Length = 74

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 10 atactccctccgtcccaaaataagt 34
          |||||||||||||||||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 83  acttattttgggacggagggagta 106
           ||||||||||||||||||||||||
Sbjct: 49  acttattttgggacggagggagta 72




>45276_miR1439:micropc
          Length = 74

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 10 atactccctccgtcccaaaataagt 34
          |||||||||||||||||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 83  acttattttgggacggagggagta 106
           ||||||||||||||||||||||||
Sbjct: 49  acttattttgggacggagggagta 72




>45016_miR1439:micropc
          Length = 74

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 10 atactccctccgtcccaaaataagt 34
          |||||||||||||||||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 83  acttattttgggacggagggagta 106
           ||||||||||||||||||||||||
Sbjct: 49  acttattttgggacggagggagta 72




>45189_miR1439:micropc
          Length = 78

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                          
Query: 10 atactccctccgtcccaaaataagtgtctcaa 41
          ||||||||||||| ||||||||| ||||||||
Sbjct: 77 atactccctccgttccaaaataactgtctcaa 46