miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46679_miR1439:micropc
          Length = 97

 Score = 73.8 bits (37), Expect = 3e-14
 Identities = 83/97 (85%), Gaps = 1/97 (1%)
 Strand = Plus / Plus

                                                                       
Query: 12  tactccctccgtcccaaaataagtgtcttaa-tttatactagctttaatacaaatttgta 70
           ||||||||||||| |||||||| ||||| || ||| |||||||| || || ||| |||||
Sbjct: 1   tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 60

                                                
Query: 71  ttaagcttgagacagttattttgggacagaggaagta 107
            ||||||||||||| ||||||||| || |||| ||||
Sbjct: 61  ctaagcttgagacacttattttggaacggagggagta 97



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                      
Query: 12 tactccctccgtcccaaaataagtgtct 39
          |||||||||||| |||||||||||||||
Sbjct: 97 tactccctccgttccaaaataagtgtct 70




>45970_miR1439:micropc
          Length = 99

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 82/99 (82%), Gaps = 1/99 (1%)
 Strand = Plus / Minus

                                                                       
Query: 11  atactccctccgtcccaaaataagtgtcttaa-tttatactagctttaatacaaatttgt 69
           ||||||||||||||||||||||| ||| | || ||| ||||||   || |||||| || |
Sbjct: 99  atactccctccgtcccaaaataactgtatcaactttgtactagagctagtacaaagttat 40

                                                  
Query: 70  attaagcttgagacagttattttgggacagaggaagtac 108
           | ||||||| ||| | |||||||||||| |||| |||||
Sbjct: 39  actaagcttaagagacttattttgggacggagggagtac 1



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 12 tactccctccgtcccaaaataagtgtcttaa 42
          |||||||||||||||||||||||| ||||||
Sbjct: 2  tactccctccgtcccaaaataagtctcttaa 32




>45205_miR1439:micropc
          Length = 99

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 82/99 (82%), Gaps = 1/99 (1%)
 Strand = Plus / Minus

                                                                       
Query: 11  atactccctccgtcccaaaataagtgtcttaa-tttatactagctttaatacaaatttgt 69
           ||||||||||||||||||||||| ||| | || ||| ||||||   || |||||| || |
Sbjct: 99  atactccctccgtcccaaaataactgtatcaactttgtactagagctagtacaaagttat 40

                                                  
Query: 70  attaagcttgagacagttattttgggacagaggaagtac 108
           | ||||||| ||| | |||||||||||| |||| |||||
Sbjct: 39  actaagcttaagagacttattttgggacggagggagtac 1



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 12 tactccctccgtcccaaaataagtgtcttaa 42
          |||||||||||||||||||||||| ||||||
Sbjct: 2  tactccctccgtcccaaaataagtctcttaa 32




>46048_miR1439:micropc
          Length = 58

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                    
Query: 11 atactccctccgtcccaaaataagtg 36
          ||||||||||||||||||||||||||
Sbjct: 57 atactccctccgtcccaaaataagtg 32




>45320_miR1439:micropc
          Length = 74

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 11 atactccctccgtcccaaaataagt 35
          |||||||||||||||||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49




>45276_miR1439:micropc
          Length = 74

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 11 atactccctccgtcccaaaataagt 35
          |||||||||||||||||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49




>45016_miR1439:micropc
          Length = 74

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 11 atactccctccgtcccaaaataagt 35
          |||||||||||||||||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49




>46836_miR1439:micropc
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 86 atactccctccgtcccaaaata 65