miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46679_miR1439:micropc
          Length = 97

 Score =  129 bits (65), Expect = 6e-31
 Identities = 89/97 (91%)
 Strand = Plus / Plus

                                                                       
Query: 25  tactccctccgtcccaaaataactatctcaactttatactagatctagtataaatttgta 84
           ||||||||||||| |||||||||| |||||||||| |||||| ||||||||||| |||||
Sbjct: 1   tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 60

                                                
Query: 85  ctaagcttaagacagttattttgggacggagggagta 121
           |||||||| ||||| ||||||||| ||||||||||||
Sbjct: 61  ctaagcttgagacacttattttggaacggagggagta 97



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 94  agacagttattttgggacggagggagta 121
           |||||||||||||| |||||||||||||
Sbjct: 28  agacagttattttgagacggagggagta 1




>45970_miR1439:micropc
          Length = 99

 Score =  123 bits (62), Expect = 4e-29
 Identities = 89/98 (90%)
 Strand = Plus / Minus

                                                                       
Query: 25  tactccctccgtcccaaaataactatctcaactttatactagatctagtataaatttgta 84
           |||||||||||||||||||||||| | |||||||| ||||||| |||||| ||| || ||
Sbjct: 98  tactccctccgtcccaaaataactgtatcaactttgtactagagctagtacaaagttata 39

                                                 
Query: 85  ctaagcttaagacagttattttgggacggagggagtac 122
           |||||||||||| | |||||||||||||||||||||||
Sbjct: 38  ctaagcttaagagacttattttgggacggagggagtac 1



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 96  acagttattttgggacggagggagta 121
           ||||||||||||||||||||||||||
Sbjct: 73  acagttattttgggacggagggagta 98



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 24 gtactccctccgtcccaaaataa 46
          |||||||||||||||||||||||
Sbjct: 1  gtactccctccgtcccaaaataa 23




>45205_miR1439:micropc
          Length = 99

 Score =  123 bits (62), Expect = 4e-29
 Identities = 89/98 (90%)
 Strand = Plus / Minus

                                                                       
Query: 25  tactccctccgtcccaaaataactatctcaactttatactagatctagtataaatttgta 84
           |||||||||||||||||||||||| | |||||||| ||||||| |||||| ||| || ||
Sbjct: 98  tactccctccgtcccaaaataactgtatcaactttgtactagagctagtacaaagttata 39

                                                 
Query: 85  ctaagcttaagacagttattttgggacggagggagtac 122
           |||||||||||| | |||||||||||||||||||||||
Sbjct: 38  ctaagcttaagagacttattttgggacggagggagtac 1



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 96  acagttattttgggacggagggagta 121
           ||||||||||||||||||||||||||
Sbjct: 73  acagttattttgggacggagggagta 98



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 24 gtactccctccgtcccaaaataa 46
          |||||||||||||||||||||||
Sbjct: 1  gtactccctccgtcccaaaataa 23




>45189_miR1439:micropc
          Length = 78

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 40/43 (93%), Gaps = 1/43 (2%)
 Strand = Plus / Plus

                                                      
Query: 79  tttgtactaagcttaagacagttattttgggacggagggagta 121
           ||||||||||| || ||||||||||||||| ||||||||||||
Sbjct: 35  tttgtactaag-ttgagacagttattttggaacggagggagta 76



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                            
Query: 25 tactccctccgtcccaaaataactatctcaactt 58
          |||||||||||| ||||||||||| |||||||||
Sbjct: 76 tactccctccgttccaaaataactgtctcaactt 43




>46048_miR1439:micropc
          Length = 58

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 25 tactccctccgtcccaaaataa 46
          ||||||||||||||||||||||
Sbjct: 56 tactccctccgtcccaaaataa 35



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 100 ttattttgggacggagggagta 121
           ||||||||||||||||||||||
Sbjct: 35  ttattttgggacggagggagta 56




>45320_miR1439:micropc
          Length = 74

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 25 tactccctccgtcccaaaataa 46
          ||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataa 51



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 100 ttattttgggacggagggagta 121
           ||||||||||||||||||||||
Sbjct: 51  ttattttgggacggagggagta 72




>45276_miR1439:micropc
          Length = 74

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 25 tactccctccgtcccaaaataa 46
          ||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataa 51



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 100 ttattttgggacggagggagta 121
           ||||||||||||||||||||||
Sbjct: 51  ttattttgggacggagggagta 72




>45016_miR1439:micropc
          Length = 74

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 25 tactccctccgtcccaaaataa 46
          ||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataa 51



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 100 ttattttgggacggagggagta 121
           ||||||||||||||||||||||
Sbjct: 51  ttattttgggacggagggagta 72