miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46679_miR1439:micropc
          Length = 97

 Score =  145 bits (73), Expect = 8e-36
 Identities = 91/97 (93%)
 Strand = Plus / Minus

                                                                       
Query: 11  tactccctccgttccaaaataagtgactcaagcttagtacaactttgtactagagctagt 70
           ||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||
Sbjct: 97  tactccctccgttccaaaataagtgtctcaagcttagtacaattttatactagagctagt 38

                                                
Query: 71  acaaagttgtgacacttattttgggacggagggagta 107
           ||||||||| |||| |||||||| |||||||||||||
Sbjct: 37  acaaagttgagacagttattttgagacggagggagta 1



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 81  gacacttattttgggacggagggagta 107
           |||||||||||||| ||||||||||||
Sbjct: 71  gacacttattttggaacggagggagta 97




>45970_miR1439:micropc
          Length = 99

 Score =  113 bits (57), Expect = 3e-26
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                       
Query: 11  tactccctccgttccaaaataagtgactcaagcttagtacaactttgtactagagctagt 70
           |||||||||||| |||||||||||  || |||||||||| |||||||||||||  |||||
Sbjct: 2   tactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctagt 61

                                                
Query: 71  acaaagttgtgacacttattttgggacggagggagta 107
           |||||||||  ||| ||||||||||||||||||||||
Sbjct: 62  acaaagttgatacagttattttgggacggagggagta 98



 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                       
Query: 50 caactttgtactagagctagtacaaagtt 78
          |||||||||||||||||||||||||||||
Sbjct: 70 caactttgtactagagctagtacaaagtt 42



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 84  acttattttgggacggagggagtac 108
           |||||||||||||||||||||||||
Sbjct: 25  acttattttgggacggagggagtac 1




>45205_miR1439:micropc
          Length = 99

 Score =  113 bits (57), Expect = 3e-26
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                       
Query: 11  tactccctccgttccaaaataagtgactcaagcttagtacaactttgtactagagctagt 70
           |||||||||||| |||||||||||  || |||||||||| |||||||||||||  |||||
Sbjct: 2   tactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctagt 61

                                                
Query: 71  acaaagttgtgacacttattttgggacggagggagta 107
           |||||||||  ||| ||||||||||||||||||||||
Sbjct: 62  acaaagttgatacagttattttgggacggagggagta 98



 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                       
Query: 50 caactttgtactagagctagtacaaagtt 78
          |||||||||||||||||||||||||||||
Sbjct: 70 caactttgtactagagctagtacaaagtt 42



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 84  acttattttgggacggagggagtac 108
           |||||||||||||||||||||||||
Sbjct: 25  acttattttgggacggagggagtac 1




>46157_miR1439:micropc
          Length = 88

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                          
Query: 10 atactccctccgttccaaaataagtgactcaa 41
          |||||||||||||||||||||| |||||||||
Sbjct: 88 atactccctccgttccaaaataggtgactcaa 57



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 70  tacaaagttgtgacacttattttgggacggagggagta 107
           |||||||||| | ||| |||||||| ||||||||||||
Sbjct: 50  tacaaagttgagtcacctattttggaacggagggagta 87




>44862_miR1439:micropc
          Length = 88

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                          
Query: 10 atactccctccgttccaaaataagtgactcaa 41
          |||||||||||||||||||||| |||||||||
Sbjct: 88 atactccctccgttccaaaataggtgactcaa 57



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 70  tacaaagttgtgacacttattttgggacggagggagta 107
           |||||||||| | ||| |||||||| ||||||||||||
Sbjct: 50  tacaaagttgagtcacctattttggaacggagggagta 87




>46048_miR1439:micropc
          Length = 58

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                         
Query: 10 atactccctccgttccaaaataagtgactca 40
          ||||||||||||| |||||||||||||||||
Sbjct: 57 atactccctccgtcccaaaataagtgactca 27



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 83  cacttattttgggacggagggagta 107
           |||||||||||||||||||||||||
Sbjct: 32  cacttattttgggacggagggagta 56




>45189_miR1439:micropc
          Length = 78

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 40/43 (93%), Gaps = 1/43 (2%)
 Strand = Plus / Minus

                                                     
Query: 10 atactccctccgttccaaaataagtgactcaagcttagtacaa 52
          ||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 77 atactccctccgttccaaaataactgtctcaa-cttagtacaa 36



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 69  gtacaaagttgtgacacttattttgggacggagggagta 107
           |||| |||||| |||| ||||||||| ||||||||||||
Sbjct: 38  gtactaagttgagacagttattttggaacggagggagta 76




>45320_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 84  acttattttgggacggagggagta 107
           ||||||||||||||||||||||||
Sbjct: 49  acttattttgggacggagggagta 72



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 10 atactccctccgttccaaaataagt 34
          ||||||||||||| |||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49




>45276_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 84  acttattttgggacggagggagta 107
           ||||||||||||||||||||||||
Sbjct: 49  acttattttgggacggagggagta 72



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 10 atactccctccgttccaaaataagt 34
          ||||||||||||| |||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49




>45016_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 84  acttattttgggacggagggagta 107
           ||||||||||||||||||||||||
Sbjct: 49  acttattttgggacggagggagta 72



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 10 atactccctccgttccaaaataagt 34
          ||||||||||||| |||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49