miRNEST 2.0, an integrative microRNA resource :: BLAST
>46679_miR1439:micropc
Length = 97
Score = 115 bits (58), Expect = 7e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 39 tgtctcaactttgtattagctgtagtataaaattgtattaagcttgagatacttattttg 98
||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||
Sbjct: 24 tgtctcaactttgtactagctctagtataaaattgtactaagcttgagacacttattttg 83
Query: 99 gaacggagggagta 112
||||||||||||||
Sbjct: 84 gaacggagggagta 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtctcaa 36
|||||||||||| ||||||||||||||||||
Sbjct: 97 tactccctccgttccaaaataagtgtctcaa 67
>45970_miR1439:micropc
Length = 99
Score = 54.0 bits (27), Expect = 2e-08
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 43 tcaactttgtattagctgtagtataaaattgtattaagcttgagatacttattttggaac 102
||||||||||| ||| ||||| ||| || || ||||||| ||| ||||||||||| ||
Sbjct: 71 tcaactttgtactagagctagtacaaagttatactaagcttaagagacttattttgggac 12
Query: 103 ggagggagtac 113
|||||||||||
Sbjct: 11 ggagggagtac 1
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagt 29
||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagt 25
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtctcaa 36
|||||||||||||||||||||| ||| ||||
Sbjct: 98 tactccctccgtcccaaaataactgtatcaa 68
>45205_miR1439:micropc
Length = 99
Score = 54.0 bits (27), Expect = 2e-08
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 43 tcaactttgtattagctgtagtataaaattgtattaagcttgagatacttattttggaac 102
||||||||||| ||| ||||| ||| || || ||||||| ||| ||||||||||| ||
Sbjct: 71 tcaactttgtactagagctagtacaaagttatactaagcttaagagacttattttgggac 12
Query: 103 ggagggagtac 113
|||||||||||
Sbjct: 11 ggagggagtac 1
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagt 29
||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagt 25
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtctcaa 36
|||||||||||||||||||||| ||| ||||
Sbjct: 98 tactccctccgtcccaaaataactgtatcaa 68
>46048_miR1439:micropc
Length = 58
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtctca 35
||||||||||||||||||||||||| ||||
Sbjct: 56 tactccctccgtcccaaaataagtgactca 27
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 89 acttattttggaacggagggagta 112
||||||||||| ||||||||||||
Sbjct: 33 acttattttgggacggagggagta 56
>45320_miR1439:micropc
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagt 29
||||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 atacttattttggaacggagggagta 112
||||||||||||| ||||||||||||
Sbjct: 47 atacttattttgggacggagggagta 72
>45276_miR1439:micropc
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagt 29
||||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 atacttattttggaacggagggagta 112
||||||||||||| ||||||||||||
Sbjct: 47 atacttattttgggacggagggagta 72
>45016_miR1439:micropc
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagt 29
||||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 atacttattttggaacggagggagta 112
||||||||||||| ||||||||||||
Sbjct: 47 atacttattttgggacggagggagta 72
>45189_miR1439:micropc
Length = 78
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtctcaa 36
|||||||||||| ||||||||| ||||||||
Sbjct: 76 tactccctccgttccaaaataactgtctcaa 46
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 82 ttgagatacttattttggaacggagggagta 112
|||||| | ||||||||||||||||||||||
Sbjct: 46 ttgagacagttattttggaacggagggagta 76
