miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46679_miR1439:micropc
          Length = 97

 Score =  115 bits (58), Expect = 8e-27
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                       
Query: 40  tgtctcaactttgtattagctgtagtataaaattgtattaagcttgagatacttattttg 99
           ||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||
Sbjct: 24  tgtctcaactttgtactagctctagtataaaattgtactaagcttgagacacttattttg 83

                         
Query: 100 gaacggagggagta 113
           ||||||||||||||
Sbjct: 84  gaacggagggagta 97



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                         
Query: 7  tactccctccgtcccaaaataagtgtctcaa 37
          |||||||||||| ||||||||||||||||||
Sbjct: 97 tactccctccgttccaaaataagtgtctcaa 67




>45970_miR1439:micropc
          Length = 99

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                       
Query: 44  tcaactttgtattagctgtagtataaaattgtattaagcttgagatacttattttggaac 103
           ||||||||||| |||   ||||| ||| || || ||||||| ||| ||||||||||| ||
Sbjct: 71  tcaactttgtactagagctagtacaaagttatactaagcttaagagacttattttgggac 12

                      
Query: 104 ggagggagtac 114
           |||||||||||
Sbjct: 11  ggagggagtac 1



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 7  tactccctccgtcccaaaataagt 30
          ||||||||||||||||||||||||
Sbjct: 2  tactccctccgtcccaaaataagt 25



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 7  tactccctccgtcccaaaataagtgtctcaa 37
          |||||||||||||||||||||| ||| ||||
Sbjct: 98 tactccctccgtcccaaaataactgtatcaa 68




>45205_miR1439:micropc
          Length = 99

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                       
Query: 44  tcaactttgtattagctgtagtataaaattgtattaagcttgagatacttattttggaac 103
           ||||||||||| |||   ||||| ||| || || ||||||| ||| ||||||||||| ||
Sbjct: 71  tcaactttgtactagagctagtacaaagttatactaagcttaagagacttattttgggac 12

                      
Query: 104 ggagggagtac 114
           |||||||||||
Sbjct: 11  ggagggagtac 1



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 7  tactccctccgtcccaaaataagt 30
          ||||||||||||||||||||||||
Sbjct: 2  tactccctccgtcccaaaataagt 25



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 7  tactccctccgtcccaaaataagtgtctcaa 37
          |||||||||||||||||||||| ||| ||||
Sbjct: 98 tactccctccgtcccaaaataactgtatcaa 68




>46048_miR1439:micropc
          Length = 58

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                        
Query: 7  tactccctccgtcccaaaataagtgtctca 36
          ||||||||||||||||||||||||| ||||
Sbjct: 56 tactccctccgtcccaaaataagtgactca 27



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 90  acttattttggaacggagggagta 113
           ||||||||||| ||||||||||||
Sbjct: 33  acttattttgggacggagggagta 56




>45320_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 7  tactccctccgtcccaaaataagt 30
          ||||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 88  atacttattttggaacggagggagta 113
           ||||||||||||| ||||||||||||
Sbjct: 47  atacttattttgggacggagggagta 72




>45276_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 7  tactccctccgtcccaaaataagt 30
          ||||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 88  atacttattttggaacggagggagta 113
           ||||||||||||| ||||||||||||
Sbjct: 47  atacttattttgggacggagggagta 72




>45016_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 7  tactccctccgtcccaaaataagt 30
          ||||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 88  atacttattttggaacggagggagta 113
           ||||||||||||| ||||||||||||
Sbjct: 47  atacttattttgggacggagggagta 72




>45189_miR1439:micropc
          Length = 78

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 7  tactccctccgtcccaaaataagtgtctcaa 37
          |||||||||||| ||||||||| ||||||||
Sbjct: 76 tactccctccgttccaaaataactgtctcaa 46



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 83  ttgagatacttattttggaacggagggagta 113
           |||||| | ||||||||||||||||||||||
Sbjct: 46  ttgagacagttattttggaacggagggagta 76