miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46679_miR1439:micropc
          Length = 97

 Score =  145 bits (73), Expect = 8e-36
 Identities = 91/97 (93%)
 Strand = Plus / Plus

                                                                       
Query: 7   tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 66
           ||||||||||||| |||||||| |||| |||||||||||||||||||||| ||| |||||
Sbjct: 1   tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 60

                                                
Query: 67  ctaagcttgagtcacttattttggaacggagggagta 103
           ||||||||||| |||||||||||||||||||||||||
Sbjct: 61  ctaagcttgagacacttattttggaacggagggagta 97



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 7  tactccctccgtcccaaaataagtgtc 33
          |||||||||||| ||||||||||||||
Sbjct: 97 tactccctccgttccaaaataagtgtc 71




>45970_miR1439:micropc
          Length = 99

 Score =  113 bits (57), Expect = 3e-26
 Identities = 87/97 (89%)
 Strand = Plus / Minus

                                                                       
Query: 7   tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 66
           |||||||||||||||||||||| |||  ||||||||||||||  ||||||||||||| ||
Sbjct: 98  tactccctccgtcccaaaataactgtatcaactttgtactagagctagtacaaagttata 39

                                                
Query: 67  ctaagcttgagtcacttattttggaacggagggagta 103
           |||||||| ||  ||||||||||| ||||||||||||
Sbjct: 38  ctaagcttaagagacttattttgggacggagggagta 2



 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 36 aactttgtactagctctagtacaaagttg 64
          |||||||||||||||||||||||||||||
Sbjct: 42 aactttgtactagctctagtacaaagttg 70



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 6  gtactccctccgtcccaaaataagt 30
          |||||||||||||||||||||||||
Sbjct: 1  gtactccctccgtcccaaaataagt 25




>45205_miR1439:micropc
          Length = 99

 Score =  113 bits (57), Expect = 3e-26
 Identities = 87/97 (89%)
 Strand = Plus / Minus

                                                                       
Query: 7   tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 66
           |||||||||||||||||||||| |||  ||||||||||||||  ||||||||||||| ||
Sbjct: 98  tactccctccgtcccaaaataactgtatcaactttgtactagagctagtacaaagttata 39

                                                
Query: 67  ctaagcttgagtcacttattttggaacggagggagta 103
           |||||||| ||  ||||||||||| ||||||||||||
Sbjct: 38  ctaagcttaagagacttattttgggacggagggagta 2



 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 36 aactttgtactagctctagtacaaagttg 64
          |||||||||||||||||||||||||||||
Sbjct: 42 aactttgtactagctctagtacaaagttg 70



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 6  gtactccctccgtcccaaaataagt 30
          |||||||||||||||||||||||||
Sbjct: 1  gtactccctccgtcccaaaataagt 25




>46157_miR1439:micropc
          Length = 88

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 73  ttgagtcacttattttggaacggagggagtat 104
           ||||||||| ||||||||||||||||||||||
Sbjct: 57  ttgagtcacctattttggaacggagggagtat 88



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                
Query: 7  tactccctccgtcccaaaataagtgtcacaactttgta 44
          |||||||||||| |||||||| ||| | ||||||||||
Sbjct: 87 tactccctccgttccaaaataggtgactcaactttgta 50




>44862_miR1439:micropc
          Length = 88

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 73  ttgagtcacttattttggaacggagggagtat 104
           ||||||||| ||||||||||||||||||||||
Sbjct: 57  ttgagtcacctattttggaacggagggagtat 88



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                
Query: 7  tactccctccgtcccaaaataagtgtcacaactttgta 44
          |||||||||||| |||||||| ||| | ||||||||||
Sbjct: 87 tactccctccgttccaaaataggtgactcaactttgta 50




>46048_miR1439:micropc
          Length = 58

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 74  tgagtcacttattttggaacggagggagtat 104
           ||||||||||||||||| |||||||||||||
Sbjct: 27  tgagtcacttattttgggacggagggagtat 57



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 7  tactccctccgtcccaaaataagtg 31
          |||||||||||||||||||||||||
Sbjct: 56 tactccctccgtcccaaaataagtg 32




>45189_miR1439:micropc
          Length = 78

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 40/43 (93%), Gaps = 1/43 (2%)
 Strand = Plus / Plus

                                                      
Query: 62  ttgtactaagcttgagtcacttattttggaacggagggagtat 104
           |||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 36  ttgtactaag-ttgagacagttattttggaacggagggagtat 77



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                 
Query: 7  tactccctccgtcccaaaataagtgtcacaactttgtac 45
          |||||||||||| ||||||||| |||| |||||| ||||
Sbjct: 76 tactccctccgttccaaaataactgtctcaacttagtac 38




>45320_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 7  tactccctccgtcccaaaataagt 30
          ||||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 80  acttattttggaacggagggagtat 104
           ||||||||||| |||||||||||||
Sbjct: 49  acttattttgggacggagggagtat 73




>45276_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 7  tactccctccgtcccaaaataagt 30
          ||||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 80  acttattttggaacggagggagtat 104
           ||||||||||| |||||||||||||
Sbjct: 49  acttattttgggacggagggagtat 73




>45016_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 7  tactccctccgtcccaaaataagt 30
          ||||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 80  acttattttggaacggagggagtat 104
           ||||||||||| |||||||||||||
Sbjct: 49  acttattttgggacggagggagtat 73