miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46679_miR1439:micropc
          Length = 97

 Score =  145 bits (73), Expect = 9e-36
 Identities = 92/97 (94%), Gaps = 1/97 (1%)
 Strand = Plus / Minus

                                                                       
Query: 14  tactccctccgtcccaaaataactgtctcaagcttagtacaattttatactagagctagt 73
           |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 97  tactccctccgttccaaaataagtgtctcaagcttagtacaattttatactagagctagt 38

                                                
Query: 74  acaaagttgagacactt-ttttgggacggagggagta 109
           |||||||||||||| || ||||| |||||||||||||
Sbjct: 37  acaaagttgagacagttattttgagacggagggagta 1



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 14 tactccctccgtcccaaaataactgtctcaa 44
          ||||||||||||| |||||||||||||||||
Sbjct: 1  tactccctccgtctcaaaataactgtctcaa 31




>45970_miR1439:micropc
          Length = 99

 Score = 99.6 bits (50), Expect = 5e-22
 Identities = 87/98 (88%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtactccctccgtcccaaaataactgtctcaagcttagtacaattttatactagagctag 72
           ||||||||||||||||||||||| | ||| |||||||||| || ||| ||||||  ||||
Sbjct: 1   gtactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctag 60

                                                 
Query: 73  tacaaagttgagacactt-ttttgggacggagggagta 109
           ||||||||||| ||| || |||||||||||||||||||
Sbjct: 61  tacaaagttgatacagttattttgggacggagggagta 98



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                         
Query: 14 tactccctccgtcccaaaataactgtctcaa 44
          |||||||||||||||||||||||||| ||||
Sbjct: 98 tactccctccgtcccaaaataactgtatcaa 68



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 61 tactagagctagtacaaagtt 81
          |||||||||||||||||||||
Sbjct: 62 tactagagctagtacaaagtt 42




>45205_miR1439:micropc
          Length = 99

 Score = 99.6 bits (50), Expect = 5e-22
 Identities = 87/98 (88%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtactccctccgtcccaaaataactgtctcaagcttagtacaattttatactagagctag 72
           ||||||||||||||||||||||| | ||| |||||||||| || ||| ||||||  ||||
Sbjct: 1   gtactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctag 60

                                                 
Query: 73  tacaaagttgagacactt-ttttgggacggagggagta 109
           ||||||||||| ||| || |||||||||||||||||||
Sbjct: 61  tacaaagttgatacagttattttgggacggagggagta 98



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                         
Query: 14 tactccctccgtcccaaaataactgtctcaa 44
          |||||||||||||||||||||||||| ||||
Sbjct: 98 tactccctccgtcccaaaataactgtatcaa 68



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 61 tactagagctagtacaaagtt 81
          |||||||||||||||||||||
Sbjct: 62 tactagagctagtacaaagtt 42




>45189_miR1439:micropc
          Length = 78

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 40/42 (95%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                    
Query: 14 tactccctccgtcccaaaataactgtctcaagcttagtacaa 55
          |||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 76 tactccctccgttccaaaataactgtctcaa-cttagtacaa 36




>46048_miR1439:micropc
          Length = 58

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 14 tactccctccgtcccaaaataa 35
          ||||||||||||||||||||||
Sbjct: 56 tactccctccgtcccaaaataa 35




>45320_miR1439:micropc
          Length = 74

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 14 tactccctccgtcccaaaataa 35
          ||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataa 51




>45276_miR1439:micropc
          Length = 74

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 14 tactccctccgtcccaaaataa 35
          ||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataa 51




>45016_miR1439:micropc
          Length = 74

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 14 tactccctccgtcccaaaataa 35
          ||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataa 51