miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46679_miR1439:micropc
          Length = 97

 Score =  123 bits (62), Expect = 3e-29
 Identities = 86/94 (91%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagt 65
          |||||||||||| |||||||||||||||  |||||||||||| ||| |||||||||||||
Sbjct: 97 tactccctccgttccaaaataagtgtctcaagcttagtacaattttatactagagctagt 38

                                            
Query: 66 ataaagttgagacatttattttgggacggaggga 99
          | |||||||||||| |||||||| ||||||||||
Sbjct: 37 acaaagttgagacagttattttgagacggaggga 4



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 6  tactccctccgtcccaaaataagtgtct 33
          ||||||||||||| |||||||| |||||
Sbjct: 1  tactccctccgtctcaaaataactgtct 28




>45970_miR1439:micropc
          Length = 99

 Score =  123 bits (62), Expect = 3e-29
 Identities = 86/94 (91%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagt 65
          |||||||||||||||||||||||| |||| ||||||||| |||||||||||||  |||||
Sbjct: 2  tactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctagt 61

                                            
Query: 66 ataaagttgagacatttattttgggacggaggga 99
          | |||||||| ||| |||||||||||||||||||
Sbjct: 62 acaaagttgatacagttattttgggacggaggga 95



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                       
Query: 45 caactttgtactagagctagtataaagtt 73
          |||||||||||||||||||||| ||||||
Sbjct: 70 caactttgtactagagctagtacaaagtt 42



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 5  atactccctccgtcccaaaataa 27
          |||||||||||||||||||||||
Sbjct: 99 atactccctccgtcccaaaataa 77




>45205_miR1439:micropc
          Length = 99

 Score =  123 bits (62), Expect = 3e-29
 Identities = 86/94 (91%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagt 65
          |||||||||||||||||||||||| |||| ||||||||| |||||||||||||  |||||
Sbjct: 2  tactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctagt 61

                                            
Query: 66 ataaagttgagacatttattttgggacggaggga 99
          | |||||||| ||| |||||||||||||||||||
Sbjct: 62 acaaagttgatacagttattttgggacggaggga 95



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                       
Query: 45 caactttgtactagagctagtataaagtt 73
          |||||||||||||||||||||| ||||||
Sbjct: 70 caactttgtactagagctagtacaaagtt 42



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 5  atactccctccgtcccaaaataa 27
          |||||||||||||||||||||||
Sbjct: 99 atactccctccgtcccaaaataa 77




>46048_miR1439:micropc
          Length = 58

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                    
Query: 5  atactccctccgtcccaaaataagtg 30
          ||||||||||||||||||||||||||
Sbjct: 57 atactccctccgtcccaaaataagtg 32




>45320_miR1439:micropc
          Length = 74

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 5  atactccctccgtcccaaaataagt 29
          |||||||||||||||||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49




>45276_miR1439:micropc
          Length = 74

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 5  atactccctccgtcccaaaataagt 29
          |||||||||||||||||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49




>45016_miR1439:micropc
          Length = 74

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 5  atactccctccgtcccaaaataagt 29
          |||||||||||||||||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49




>45189_miR1439:micropc
          Length = 78

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 69 aagttgagacatttattttgggacggaggga 99
          ||||||||||| ||||||||| |||||||||
Sbjct: 43 aagttgagacagttattttggaacggaggga 73



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                       
Query: 5  atactccctccgtcccaaaataagtgtct 33
          ||||||||||||| ||||||||| |||||
Sbjct: 77 atactccctccgttccaaaataactgtct 49