miRNEST 2.0, an integrative microRNA resource :: BLAST
>46679_miR1439:micropc
Length = 97
Score = 129 bits (65), Expect = 5e-31
Identities = 89/97 (91%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgtactagttctagtacaaagttgta 70
|||||||||||| |||||||| ||||||||||||||||||| ||||||| ||| |||||
Sbjct: 1 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 60
Query: 71 ctaagcttgagacagttattttgggacggagggagta 107
|||||||||||||| ||||||||| ||||||||||||
Sbjct: 61 ctaagcttgagacacttattttggaacggagggagta 97
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaataagtgtctcaa 41
|||||||||||||||||||||||||||||||
Sbjct: 97 tactccctccgttccaaaataagtgtctcaa 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 77 ttgagacagttattttgggacggagggagta 107
||||||||||||||||| |||||||||||||
Sbjct: 31 ttgagacagttattttgagacggagggagta 1
>45970_miR1439:micropc
Length = 99
Score = 121 bits (61), Expect = 1e-28
Identities = 88/97 (90%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgtactagttctagtacaaagttgta 70
|||||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||| ||
Sbjct: 98 tactccctccgtcccaaaataactgtatcaactttgtactagagctagtacaaagttata 39
Query: 71 ctaagcttgagacagttattttgggacggagggagta 107
|||||||| ||| | ||||||||||||||||||||||
Sbjct: 38 ctaagcttaagagacttattttgggacggagggagta 2
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 77 ttgagacagttattttgggacggagggagta 107
|||| ||||||||||||||||||||||||||
Sbjct: 68 ttgatacagttattttgggacggagggagta 98
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 40 aactttgtactagttctagtacaaagttg 68
||||||||||||| |||||||||||||||
Sbjct: 42 aactttgtactagctctagtacaaagttg 70
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 gtactccctccgttccaaaataagt 34
||||||||||||| |||||||||||
Sbjct: 1 gtactccctccgtcccaaaataagt 25
>45205_miR1439:micropc
Length = 99
Score = 121 bits (61), Expect = 1e-28
Identities = 88/97 (90%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgtactagttctagtacaaagttgta 70
|||||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||| ||
Sbjct: 98 tactccctccgtcccaaaataactgtatcaactttgtactagagctagtacaaagttata 39
Query: 71 ctaagcttgagacagttattttgggacggagggagta 107
|||||||| ||| | ||||||||||||||||||||||
Sbjct: 38 ctaagcttaagagacttattttgggacggagggagta 2
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 77 ttgagacagttattttgggacggagggagta 107
|||| ||||||||||||||||||||||||||
Sbjct: 68 ttgatacagttattttgggacggagggagta 98
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 40 aactttgtactagttctagtacaaagttg 68
||||||||||||| |||||||||||||||
Sbjct: 42 aactttgtactagctctagtacaaagttg 70
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 gtactccctccgttccaaaataagt 34
||||||||||||| |||||||||||
Sbjct: 1 gtactccctccgtcccaaaataagt 25
>45189_miR1439:micropc
Length = 78
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgtac 49
|||||||||||||||||||||| ||||||||||| ||||
Sbjct: 76 tactccctccgttccaaaataactgtctcaacttagtac 38
Score = 60.0 bits (30), Expect = 4e-10
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 66 ttgtactaagcttgagacagttattttgggacggagggagta 107
|||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 36 ttgtactaag-ttgagacagttattttggaacggagggagta 76
>46157_miR1439:micropc
Length = 88
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgta 48
||||||||||||||||||||| ||| ||||||||||||
Sbjct: 87 tactccctccgttccaaaataggtgactcaactttgta 50
>44862_miR1439:micropc
Length = 88
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgta 48
||||||||||||||||||||| ||| ||||||||||||
Sbjct: 87 tactccctccgttccaaaataggtgactcaactttgta 50
>46754_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgtactagttctagtacaaa 64
|||||||||||||||| |||| || ||||||||||||||| | |||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaat 30
||||||||||||||||||||
Sbjct: 86 tactccctccgttccaaaat 67
>46594_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgtactagttctagtacaaa 64
|||||||||||||||| |||| || ||||||||||||||| | |||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaat 30
||||||||||||||||||||
Sbjct: 86 tactccctccgttccaaaat 67
>46493_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgtactagttctagtacaaa 64
|||||||||||||||| |||| || ||||||||||||||| | |||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaat 30
||||||||||||||||||||
Sbjct: 86 tactccctccgttccaaaat 67
>46463_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgtactagttctagtacaaa 64
|||||||||||||||| |||| || ||||||||||||||| | |||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaat 30
||||||||||||||||||||
Sbjct: 86 tactccctccgttccaaaat 67
>46315_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgtactagttctagtacaaa 64
|||||||||||||||| |||| || ||||||||||||||| | |||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaat 30
||||||||||||||||||||
Sbjct: 86 tactccctccgttccaaaat 67
>46176_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgtactagttctagtacaaa 64
|||||||||||||||| |||| || ||||||||||||||| | |||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaat 30
||||||||||||||||||||
Sbjct: 86 tactccctccgttccaaaat 67
>45675_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgtactagttctagtacaaa 64
|||||||||||||||| |||| || ||||||||||||||| | |||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaat 30
||||||||||||||||||||
Sbjct: 86 tactccctccgttccaaaat 67
>45656_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgtactagttctagtacaaa 64
|||||||||||||||| |||| || ||||||||||||||| | |||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaat 30
||||||||||||||||||||
Sbjct: 86 tactccctccgttccaaaat 67
>45535_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgtactagttctagtacaaa 64
|||||||||||||||| |||| || ||||||||||||||| | |||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaat 30
||||||||||||||||||||
Sbjct: 86 tactccctccgttccaaaat 67
>44790_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaataagtgtctcaactttgtactagttctagtacaaa 64
|||||||||||||||| |||| || ||||||||||||||| | |||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaat 30
||||||||||||||||||||
Sbjct: 86 tactccctccgttccaaaat 67
