miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46048_miR1439:micropc
          Length = 58

 Score =  115 bits (58), Expect = 4e-27
 Identities = 58/58 (100%)
 Strand = Plus / Plus

                                                                    
Query: 10 atactccctcccgtgcccaaaataagtgagtcacttattttgggacggagggagtatt 67
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atactccctcccgtgcccaaaataagtgagtcacttattttgggacggagggagtatt 58



 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                       
Query: 25 cccaaaataagtgagtcacttattttggg 53
          |||||||||||||| ||||||||||||||
Sbjct: 44 cccaaaataagtgactcacttattttggg 16




>45320_miR1439:micropc
          Length = 74

 Score = 52.0 bits (26), Expect = 5e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 42 acttattttgggacggagggagtatt 67
          ||||||||||||||||||||||||||
Sbjct: 49 acttattttgggacggagggagtatt 74




>45276_miR1439:micropc
          Length = 74

 Score = 52.0 bits (26), Expect = 5e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 42 acttattttgggacggagggagtatt 67
          ||||||||||||||||||||||||||
Sbjct: 49 acttattttgggacggagggagtatt 74




>45016_miR1439:micropc
          Length = 74

 Score = 52.0 bits (26), Expect = 5e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 42 acttattttgggacggagggagtatt 67
          ||||||||||||||||||||||||||
Sbjct: 49 acttattttgggacggagggagtatt 74




>45970_miR1439:micropc
          Length = 99

 Score = 48.1 bits (24), Expect = 8e-07
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 42 acttattttgggacggagggagta 65
          ||||||||||||||||||||||||
Sbjct: 25 acttattttgggacggagggagta 2



 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 44 ttattttgggacggagggagtat 66
          |||||||||||||||||||||||
Sbjct: 77 ttattttgggacggagggagtat 99




>45205_miR1439:micropc
          Length = 99

 Score = 48.1 bits (24), Expect = 8e-07
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 42 acttattttgggacggagggagta 65
          ||||||||||||||||||||||||
Sbjct: 25 acttattttgggacggagggagta 2



 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 44 ttattttgggacggagggagtat 66
          |||||||||||||||||||||||
Sbjct: 77 ttattttgggacggagggagtat 99




>46157_miR1439:micropc
          Length = 88

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 36 tgagtcacttattttgggacggagggagtat 66
          |||||||| |||||||| |||||||||||||
Sbjct: 58 tgagtcacctattttggaacggagggagtat 88




>44862_miR1439:micropc
          Length = 88

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 36 tgagtcacttattttgggacggagggagtat 66
          |||||||| |||||||| |||||||||||||
Sbjct: 58 tgagtcacctattttggaacggagggagtat 88




>46836_miR1439:micropc
          Length = 86

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 45 tattttgggacggagggagtat 66
          ||||||||||||||||||||||
Sbjct: 65 tattttgggacggagggagtat 86




>46679_miR1439:micropc
          Length = 97

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 36 tgagtcacttattttgggacggagggagta 65
          |||| |||||||||||| ||||||||||||
Sbjct: 68 tgagacacttattttggaacggagggagta 97