miRNEST 2.0, an integrative microRNA resource :: BLAST
>44859_miR171:micropc
Length = 84
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 75 tctcttagttatctgattgagccgcgccaatatct 109
|||||||| ||||||||||||||||| ||||||||
Sbjct: 50 tctcttagatatctgattgagccgcgtcaatatct 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 22 gatattggcctggttcactcagatattcc 50
||||||||||||||||| |||||| ||||
Sbjct: 1 gatattggcctggttcattcagatcttcc 29
>46257_miR171:micropc
Length = 83
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 75 tctcttagttatctgattgagccgcgccaatatc 108
|||||||| ||||||||||||||||| |||||||
Sbjct: 50 tctcttagatatctgattgagccgcgtcaatatc 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 22 gatattggcctggttcactcagatattcc 50
||||||||||||||||| |||||| ||||
Sbjct: 1 gatattggcctggttcattcagatcttcc 29
>45171_miR171:micropc
Length = 83
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 75 tctcttagttatctgattgagccgcgccaatatc 108
|||||||| ||||||||||||||||| |||||||
Sbjct: 50 tctcttagatatctgattgagccgcgtcaatatc 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 22 gatattggcctggttcactcagatattcc 50
||||||||||||||||| |||||| ||||
Sbjct: 1 gatattggcctggttcattcagatcttcc 29
>46581_miR171:micropc
Length = 81
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 75 tctcttagttatctgattgagccgcgccaatat 107
|||||||| ||||||||||||||||| ||||||
Sbjct: 49 tctcttagatatctgattgagccgcgtcaatat 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 23 atattggcctggttcactcagatattcc 50
|||||||||||||||| |||||| ||||
Sbjct: 1 atattggcctggttcattcagatcttcc 28
>46772_miR171:micropc
Length = 122
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 gatattggcctggttcactcaga 44
|||||||||||||||||||||||
Sbjct: 1 gatattggcctggttcactcaga 23
>46672_miR171:micropc
Length = 123
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 gatattggcctggttcactcaga 44
|||||||||||||||||||||||
Sbjct: 1 gatattggcctggttcactcaga 23
>45683_miR171:micropc
Length = 122
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 gatattggcctggttcactcaga 44
|||||||||||||||||||||||
Sbjct: 1 gatattggcctggttcactcaga 23
>45685_miR171:micropc
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 atattggcctggttcactcaga 44
||||||||||||||||||||||
Sbjct: 1 atattggcctggttcactcaga 22
>46823_miR171:micropc
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 gattgagccgcgccaatatc 108
||||||||||||||||||||
Sbjct: 69 gattgagccgcgccaatatc 88
>46713_miR171:micropc
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 atctgattgagccgcgccaatatc 108
|||||||||||||| |||||||||
Sbjct: 81 atctgattgagccgtgccaatatc 104
>46653_miR171:micropc
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 86 tctgattgagccgcgccaatatct 109
||||||||||||| ||||||||||
Sbjct: 77 tctgattgagccgtgccaatatct 100
>46417_miR171:micropc
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 86 tctgattgagccgcgccaatatct 109
||||||||||||| ||||||||||
Sbjct: 77 tctgattgagccgtgccaatatct 100
>46414_miR171:micropc
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 gattgagccgcgccaatatc 108
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
>46256_miR171:micropc
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 gattgagccgcgccaatatc 108
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
>46236_miR171:micropc
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 gattgagccgcgccaatatc 108
||||||||||||||||||||
Sbjct: 66 gattgagccgcgccaatatc 85
>46191_miR171:micropc
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 gattgagccgcgccaatatc 108
||||||||||||||||||||
Sbjct: 63 gattgagccgcgccaatatc 82
>45865_miR171:micropc
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 gattgagccgcgccaatatc 108
||||||||||||||||||||
Sbjct: 66 gattgagccgcgccaatatc 85
>45723_miR171:micropc
Length = 82
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 gattgagccgcgccaatatc 108
||||||||||||||||||||
Sbjct: 63 gattgagccgcgccaatatc 82
>45597_miR171:micropc
Length = 82
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 gattgagccgcgccaatatc 108
||||||||||||||||||||
Sbjct: 63 gattgagccgcgccaatatc 82
>45507_miR171:micropc
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 gattgagccgcgccaatatc 108
||||||||||||||||||||
Sbjct: 66 gattgagccgcgccaatatc 85
>45439_miR171:micropc
Length = 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 gattgagccgcgccaatatc 108
||||||||||||||||||||
Sbjct: 65 gattgagccgcgccaatatc 84
>45204_miR171:micropc
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 86 tctgattgagccgcgccaatatct 109
||||||||||||| ||||||||||
Sbjct: 77 tctgattgagccgtgccaatatct 100
>45180_miR171:micropc
Length = 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 gattgagccgcgccaatatc 108
||||||||||||||||||||
Sbjct: 65 gattgagccgcgccaatatc 84
>45121_miR171:micropc
Length = 82
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 gattgagccgcgccaatatc 108
||||||||||||||||||||
Sbjct: 63 gattgagccgcgccaatatc 82
>45007_miR171:micropc
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 gattgagccgcgccaatatc 108
||||||||||||||||||||
Sbjct: 66 gattgagccgcgccaatatc 85
>44930_miR171:micropc
Length = 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 gattgagccgcgccaatatc 108
||||||||||||||||||||
Sbjct: 66 gattgagccgcgccaatatc 85
>44926_miR171:micropc
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 atctgattgagccgcgccaatatc 108
|||||||||||||| |||||||||
Sbjct: 81 atctgattgagccgtgccaatatc 104
