miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46205_miR157:micropc
          Length = 84

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 73/83 (87%), Gaps = 1/83 (1%)
 Strand = Plus / Plus

                                                                      
Query: 13 tgacagaagagagagagtacaacccgccattagctaaagag-tctttgcttttgttggga 71
          |||||||||| |||||| ||||||||||||| || |||||| |||| ||   ||||||||
Sbjct: 2  tgacagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttggga 61

                                 
Query: 72 gtgtgctctctcttctcctgtca 94
          |||||||||||||||| ||||||
Sbjct: 62 gtgtgctctctcttcttctgtca 84




>45433_miR156:micropc
          Length = 83

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 73/83 (87%), Gaps = 1/83 (1%)
 Strand = Plus / Plus

                                                                      
Query: 13 tgacagaagagagagagtacaacccgccattagctaaagag-tctttgcttttgttggga 71
          |||||||||| |||||| ||||||||||||| || |||||| |||| ||   ||||||||
Sbjct: 1  tgacagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttggga 60

                                 
Query: 72 gtgtgctctctcttctcctgtca 94
          |||||||||||||||| ||||||
Sbjct: 61 gtgtgctctctcttcttctgtca 83




>46600_miR156:micropc
          Length = 81

 Score = 75.8 bits (38), Expect = 6e-15
 Identities = 66/74 (89%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                      
Query: 14 gacagaagagagagagtacaacccgccattagctaaag-agtctttgcttttgttgggag 72
          |||||||||||||||| ||||||||  | | ||||||| ||||||||| |||||||||||
Sbjct: 1  gacagaagagagagagcacaacccgggaatggctaaaggagtctttgcctttgttgggag 60

                        
Query: 73 tgtgctctctcttc 86
          ||||| ||||||||
Sbjct: 61 tgtgccctctcttc 74




>45755_miR156:micropc
          Length = 77

 Score = 71.9 bits (36), Expect = 9e-14
 Identities = 64/72 (88%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                      
Query: 16 cagaagagagagagtacaacccgccattagctaaag-agtctttgcttttgttgggagtg 74
          |||||||||||||| ||||||||  | | ||||||| ||||||||| |||||||||||||
Sbjct: 1  cagaagagagagagcacaacccgggaatggctaaaggagtctttgcctttgttgggagtg 60

                      
Query: 75 tgctctctcttc 86
          ||| ||||||||
Sbjct: 61 tgccctctcttc 72




>45453_miR156:micropc
          Length = 77

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 64/73 (87%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                      
Query: 16 cagaagagagagagtacaacccgccattagctaaagag-tctttgcttttgttgggagtg 74
          ||||||| |||||| ||||||||||||| || |||||| |||| ||   |||||||||||
Sbjct: 1  cagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttgggagtg 60

                       
Query: 75 tgctctctcttct 87
          |||||||||||||
Sbjct: 61 tgctctctcttct 73




>46380_miR157:micropc
          Length = 85

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 13 tgacagaagagagagagtacaacccg 38
          ||||||||||||||||| ||||||||
Sbjct: 2  tgacagaagagagagagcacaacccg 27



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 62 tttgttgggagtgtgctctct 82
          |||||||||||||||||||||
Sbjct: 53 tttgttgggagtgtgctctct 73




>45257_miR156:micropc
          Length = 84

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 13 tgacagaagagagagagtacaacccg 38
          ||||||||||||||||| ||||||||
Sbjct: 1  tgacagaagagagagagcacaacccg 26



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 62 tttgttgggagtgtgctctct 82
          |||||||||||||||||||||
Sbjct: 52 tttgttgggagtgtgctctct 72




>44952_miR156:micropc
          Length = 84

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 13 tgacagaagagagagagtacaacccg 38
          ||||||||||||||||| ||||||||
Sbjct: 1  tgacagaagagagagagcacaacccg 26



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 62 tttgttgggagtgtgctctct 82
          |||||||||||||||||||||
Sbjct: 52 tttgttgggagtgtgctctct 72




>46790_miR156:micropc
          Length = 82

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 14 gacagaagagagagagtacaacccg 38
          |||||||||||||||| ||||||||
Sbjct: 1  gacagaagagagagagcacaacccg 25



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 62 tttgttgggagtgtgctctct 82
          |||||||||||||||||||||
Sbjct: 51 tttgttgggagtgtgctctct 71




>45156_miR156:micropc
          Length = 78

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 62 tttgttgggagtgtgctctct 82
          |||||||||||||||||||||
Sbjct: 49 tttgttgggagtgtgctctct 69