miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46371_miR398:micropc
          Length = 77

 Score =  129 bits (65), Expect = 4e-31
 Identities = 74/77 (96%)
 Strand = Plus / Plus

                                                                      
Query: 6  cagggtcgacatgagaccacatgaagctatcatatttgtctatgttatccaactcatgtg 65
          |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 1  cagggtcgacatgagagcacatgaagctatcatggttgtctatgttatccaactcatgtg 60

                           
Query: 66 ttctcaggtcgcccctg 82
          |||||||||||||||||
Sbjct: 61 ttctcaggtcgcccctg 77




>46690_miR398:micropc
          Length = 75

 Score =  125 bits (63), Expect = 5e-30
 Identities = 72/75 (96%)
 Strand = Plus / Plus

                                                                      
Query: 7  agggtcgacatgagaccacatgaagctatcatatttgtctatgttatccaactcatgtgt 66
          ||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 1  agggtcgacatgagagcacatgaagctatcatggttgtctatgttatccaactcatgtgt 60

                         
Query: 67 tctcaggtcgcccct 81
          |||||||||||||||
Sbjct: 61 tctcaggtcgcccct 75




>46034_miR398:micropc
          Length = 77

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 59 tcatgtgttctcaggtcgcccctg 82
          ||||||||||||||||||||||||
Sbjct: 54 tcatgtgttctcaggtcgcccctg 77




>45294_miR398:micropc
          Length = 98

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 59 tcatgtgttctcaggtcgcccctg 82
          ||||||||||||||||||||||||
Sbjct: 75 tcatgtgttctcaggtcgcccctg 98




>46686_miR398:micropc
          Length = 96

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 tcatgtgttctcaggtcgcccct 81
          |||||||||||||||||||||||
Sbjct: 74 tcatgtgttctcaggtcgcccct 96




>46116_miR398:micropc
          Length = 77

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 catgtgttctcaggtcgcccctg 82
          |||||||||||||||||||||||
Sbjct: 55 catgtgttctcaggtcgcccctg 77




>46074_miR398:micropc
          Length = 75

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 tcatgtgttctcaggtcgcccct 81
          |||||||||||||||||||||||
Sbjct: 53 tcatgtgttctcaggtcgcccct 75




>45519_miR398:micropc
          Length = 61

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 catgtgttctcaggtcgcccctg 82
          |||||||||||||||||||||||
Sbjct: 39 catgtgttctcaggtcgcccctg 61




>45422_miR398:micropc
          Length = 78

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 catgtgttctcaggtcgcccctg 82
          |||||||||||||||||||||||
Sbjct: 56 catgtgttctcaggtcgcccctg 78




>46725_miR398:micropc
          Length = 67

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 61 atgtgttctcaggtcgcccctg 82
          ||||||||||||||||||||||
Sbjct: 46 atgtgttctcaggtcgcccctg 67




>46604_miR398:micropc
          Length = 67

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 61 atgtgttctcaggtcgcccctg 82
          ||||||||||||||||||||||
Sbjct: 46 atgtgttctcaggtcgcccctg 67




>46304_miR398:micropc
          Length = 59

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 catgtgttctcaggtcgcccct 81
          ||||||||||||||||||||||
Sbjct: 38 catgtgttctcaggtcgcccct 59




>46303_miR398:micropc
          Length = 75

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 catgtgttctcaggtcgcccct 81
          ||||||||||||||||||||||
Sbjct: 54 catgtgttctcaggtcgcccct 75




>46111_miR398:micropc
          Length = 76

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 catgtgttctcaggtcgcccct 81
          ||||||||||||||||||||||
Sbjct: 55 catgtgttctcaggtcgcccct 76




>44891_miR398:micropc
          Length = 89

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 61 atgtgttctcaggtcgcccctg 82
          ||||||||||||||||||||||
Sbjct: 68 atgtgttctcaggtcgcccctg 89




>46795_miR398:micropc
          Length = 101

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 62  tgtgttctcaggtcgcccctg 82
           |||||||||||||||||||||
Sbjct: 81  tgtgttctcaggtcgcccctg 101




>46392_miR398:micropc
          Length = 68

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 62 tgtgttctcaggtcgcccctg 82
          |||||||||||||||||||||
Sbjct: 48 tgtgttctcaggtcgcccctg 68




>46114_miR398:micropc
          Length = 65

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 61 atgtgttctcaggtcgcccct 81
          |||||||||||||||||||||
Sbjct: 45 atgtgttctcaggtcgcccct 65




>45920_miR398:micropc
          Length = 104

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 60  catgtgttctcaggtcgcccc 80
           |||||||||||||||||||||
Sbjct: 84  catgtgttctcaggtcgcccc 104




>45284_miR398:micropc
          Length = 104

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 60  catgtgttctcaggtcgcccc 80
           |||||||||||||||||||||
Sbjct: 84  catgtgttctcaggtcgcccc 104




>45192_miR398:micropc
          Length = 65

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 61 atgtgttctcaggtcgcccct 81
          |||||||||||||||||||||
Sbjct: 45 atgtgttctcaggtcgcccct 65




>45095_miR398:micropc
          Length = 87

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 61 atgtgttctcaggtcgcccct 81
          |||||||||||||||||||||
Sbjct: 67 atgtgttctcaggtcgcccct 87




>46367_miR398:micropc
          Length = 73

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 gtgttctcaggtcgcccctg 82
          ||||||||||||||||||||
Sbjct: 54 gtgttctcaggtcgcccctg 73




>46124_miR398:micropc
          Length = 97

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 59 tcatgtgttctcaggtcgcccctg 82
          ||||||||||||||||| ||||||
Sbjct: 74 tcatgtgttctcaggtcacccctg 97




>45930_miR398:micropc
          Length = 63

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 gtgttctcaggtcgcccctg 82
          ||||||||||||||||||||
Sbjct: 44 gtgttctcaggtcgcccctg 63




>45898_miR398:micropc
          Length = 66

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 62 tgtgttctcaggtcgcccct 81
          ||||||||||||||||||||
Sbjct: 47 tgtgttctcaggtcgcccct 66




>45694_miR398:micropc
          Length = 99

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 62 tgtgttctcaggtcgcccct 81
          ||||||||||||||||||||
Sbjct: 80 tgtgttctcaggtcgcccct 99




>45087_miR398:micropc
          Length = 84

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 gtgttctcaggtcgcccctg 82
          ||||||||||||||||||||
Sbjct: 65 gtgttctcaggtcgcccctg 84




>46550_miR398:micropc
          Length = 61

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 64 tgttctcaggtcgcccctg 82
          |||||||||||||||||||
Sbjct: 43 tgttctcaggtcgcccctg 61




>45384_miR398:micropc
          Length = 83

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 63 gtgttctcaggtcgcccct 81
          |||||||||||||||||||
Sbjct: 65 gtgttctcaggtcgcccct 83




>45380_miR398:micropc
          Length = 108

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 60  catgtgttctcaggtcgcccctg 82
           |||||||||||||||| ||||||
Sbjct: 86  catgtgttctcaggtcacccctg 108




>45370_miR398:micropc
          Length = 95

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 59 tcatgtgttctcaggtcgcccct 81
          ||||||||||||||||| |||||
Sbjct: 73 tcatgtgttctcaggtcacccct 95




>45163_miR398:micropc
          Length = 71

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 63 gtgttctcaggtcgcccct 81
          |||||||||||||||||||
Sbjct: 53 gtgttctcaggtcgcccct 71




>44941_miR398:micropc
          Length = 61

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 63 gtgttctcaggtcgcccct 81
          |||||||||||||||||||
Sbjct: 43 gtgttctcaggtcgcccct 61