miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46472_miR437:micropc
          Length = 180

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtcaaacttctttaactttgaccaagtttctagaaagttatattaacatcttcagtacca 60
           ||||||||||| ||||||| ||||||||| ||||||  |||| |||||||  || |||||
Sbjct: 178 gtcaaacttctctaactttaaccaagtttgtagaaaaatatactaacatcagcaatacca 119

                              
Query: 61  aataaatgtactatcaaga 79
           ||||| || ||||||||||
Sbjct: 118 aataattgcactatcaaga 100



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 130 atttttctataaactttgtcaaagttagagaagtttgactt 170
           ||||||||| |||||| || |||||||||||||||||||||
Sbjct: 140 atttttctacaaacttggttaaagttagagaagtttgactt 180



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 132 ttttctataaactttgtcaaagttagaga 160
           |||||||||||||| ||||||||| ||||
Sbjct: 39  ttttctataaacttggtcaaagttggaga 11




>46270_miR437:micropc
          Length = 175

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                          
Query: 124 tggtgcatttttctataaactttgtcaaagttagagaagtttgactt 170
           ||||||||||||||||||||||  ||||||||||||| |||||||||
Sbjct: 47  tggtgcatttttctataaacttgatcaaagttagagaggtttgactt 1



 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 131 tttttctataaactttgtcaaagttagagaagtttgactt 170
           |||||||| ||||||  |||||||||||||||||||||||
Sbjct: 136 tttttctaaaaacttgatcaaagttagagaagtttgactt 175



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 1   gtcaaacttctttaactttgaccaagtttctagaaa 36
           ||||||||||| ||||||||| ||||||| ||||||
Sbjct: 173 gtcaaacttctctaactttgatcaagtttttagaaa 138




>45607_miR437:micropc
          Length = 177

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 1   gtcaaacttctttaactttgaccaagtttctagaaagttatattaacatct 51
           |||| |||||| |||||||||||||  || ||||||  |||||||||||||
Sbjct: 175 gtcagacttctctaactttgaccaaagttttagaaaaatatattaacatct 125



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 39/42 (92%), Gaps = 2/42 (4%)
 Strand = Plus / Plus

                                                     
Query: 130 atttttctataaactttg-tcaaagttagagaagtttgactt 170
           ||||||||| |||||||| |||||||||||||||| ||||||
Sbjct: 137 atttttcta-aaactttggtcaaagttagagaagtctgactt 177




>45012_miR437:micropc
          Length = 149

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 1   gtcaaacttctttaactttgaccaagtttctagaaa 36
           ||||||||||| |||||| || |||||||| |||||
Sbjct: 147 gtcaaacttctctaacttagatcaagtttcgagaaa 112



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 151 aagttagagaagtttgactt 170
           ||||||||||||||||||||
Sbjct: 130 aagttagagaagtttgactt 149