miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45991_miR162:micropc
Length = 108
Score = 210 bits (106), Expect = 2e-55
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttccataatcctaatgattaaatgttcatacgacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tggattcagcggttcatcgatctgttccataatcctaatgattaaatgttcatacgacga 61
Query: 61 ttgagagaggtgggaaatggaatcgatcgataaacctctgcatcca 106
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttgagagaggtgggaaatggaatcgatcgataaacctctgcatcca 107
>46457_miR162:micropc
Length = 109
Score = 137 bits (69), Expect = 2e-33
Identities = 101/110 (91%), Gaps = 5/110 (4%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttccataatcctaatgattaaatgttcatacgacga 60
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 1 tggattcagcggttcatcgatctgttccataatcctaatgattgaat-ttcatacgacga 59
Query: 61 ttgagagaggt----gggaaatggaatcgatcgataaacctctgcatcca 106
||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 60 ttgagagagagatacgggaaaaggaatcgatcgataaacctctgcatcca 109
>45901_miR162:micropc
Length = 111
Score = 137 bits (69), Expect = 2e-33
Identities = 101/110 (91%), Gaps = 5/110 (4%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttccataatcctaatgattaaatgttcatacgacga 60
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 2 tggattcagcggttcatcgatctgttccataatcctaatgattgaat-ttcatacgacga 60
Query: 61 ttgagagaggt----gggaaatggaatcgatcgataaacctctgcatcca 106
||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 61 ttgagagagagatacgggaaaaggaatcgatcgataaacctctgcatcca 110
>46090_miR162:micropc
Length = 97
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 79 ggaatcgatcgataaacctctgcatcca 106
||||||||||||||||||||||||||||
Sbjct: 70 ggaatcgatcgataaacctctgcatcca 97
>45749_miR162:micropc
Length = 99
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 79 ggaatcgatcgataaacctctgcatcca 106
||||||||||||||||||||||||||||
Sbjct: 71 ggaatcgatcgataaacctctgcatcca 98
>46817_miR162:micropc
Length = 93
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||||||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatcca 92
>46676_miR162:micropc
Length = 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||||||||||||||||||||||||
Sbjct: 70 gaatcgatcgataaacctctgcatcca 96
>46597_miR162:micropc
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||||||||||||||||||||||||
Sbjct: 65 gaatcgatcgataaacctctgcatcca 91
>46549_miR162:micropc
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||||||||||||||||||||||||
Sbjct: 65 gaatcgatcgataaacctctgcatcca 91
>46511_miR162:micropc
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||||||||||||||||||||||||
Sbjct: 63 gaatcgatcgataaacctctgcatcca 89
>46504_miR162:micropc
Length = 90
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||||||||||||||||||||||||
Sbjct: 64 gaatcgatcgataaacctctgcatcca 90
>46394_miR162:micropc
Length = 95
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||||||||||||||||||||||||
Sbjct: 69 gaatcgatcgataaacctctgcatcca 95
>46364_miR162:micropc
Length = 95
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||||||||||||||||||||||||
Sbjct: 69 gaatcgatcgataaacctctgcatcca 95
>46039_miR162:micropc
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||||||||||||||||||||||||
Sbjct: 65 gaatcgatcgataaacctctgcatcca 91
>45903_miR162:micropc
Length = 90
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||||||||||||||||||||||||
Sbjct: 64 gaatcgatcgataaacctctgcatcca 90
>45545_miR162:micropc
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||||||||||||||||||||||||
Sbjct: 64 gaatcgatcgataaacctctgcatcca 90
>44934_miR162:micropc
Length = 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||||||||||||||||||||||||
Sbjct: 70 gaatcgatcgataaacctctgcatcca 96
>44890_miR162:micropc
Length = 141
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttccataatcctaatgat 42
||||| |||||||||||||||||||||| ||| ||| |||||
Sbjct: 2 tggatgcagcggttcatcgatctgttccctaagcctgatgat 43
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ggaatcgatcgataaacctctgcatcca 106
||||||| ||||||||||||||||||||
Sbjct: 113 ggaatcggtcgataaacctctgcatcca 140
>44807_miR162:micropc
Length = 141
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttccataatcctaatgat 42
||||| |||||||||||||||||||||| ||| ||| |||||
Sbjct: 2 tggatgcagcggttcatcgatctgttccctaagcctgatgat 43
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ggaatcgatcgataaacctctgcatcca 106
||||||| ||||||||||||||||||||
Sbjct: 113 ggaatcggtcgataaacctctgcatcca 140
>46628_miR162:micropc
Length = 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttccataatcctaatga 41
||||| |||||||||||||||||||||| ||| ||| ||||
Sbjct: 2 tggatgcagcggttcatcgatctgttccctaagcctgatga 42
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ggaatcgatcgataaacctctgcatcca 106
||||||| ||||||||||||||||||||
Sbjct: 108 ggaatcggtcgataaacctctgcatcca 135
>46470_miR162:micropc
Length = 135
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttccataatcctaatga 41
||||| |||||||||||||||||||||| ||| ||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttccctaagcctgatga 41
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ggaatcgatcgataaacctctgcatcca 106
||||||| ||||||||||||||||||||
Sbjct: 108 ggaatcggtcgataaacctctgcatcca 135
>46169_miR162:micropc
Length = 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttccataatcctaatga 41
||||| |||||||||||||||||||||| ||| ||| ||||
Sbjct: 2 tggatgcagcggttcatcgatctgttccctaagcctgatga 42
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ggaatcgatcgataaacctctgcatcca 106
||||||| ||||||||||||||||||||
Sbjct: 108 ggaatcggtcgataaacctctgcatcca 135
>45868_miR162:micropc
Length = 135
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttccataatcctaatga 41
||||| |||||||||||||||||||||| ||| ||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttccctaagcctgatga 41
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ggaatcgatcgataaacctctgcatcca 106
||||||| ||||||||||||||||||||
Sbjct: 108 ggaatcggtcgataaacctctgcatcca 135
>45605_miR162:micropc
Length = 135
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttccataatcctaatga 41
||||| |||||||||||||||||||||| ||| ||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttccctaagcctgatga 41
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ggaatcgatcgataaacctctgcatcca 106
||||||| ||||||||||||||||||||
Sbjct: 108 ggaatcggtcgataaacctctgcatcca 135
>45084_miR162:micropc
Length = 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttccataatcctaatga 41
||||| |||||||||||||||||||||| ||| ||| ||||
Sbjct: 2 tggatgcagcggttcatcgatctgttccctaagcctgatga 42
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ggaatcgatcgataaacctctgcatcca 106
||||||| ||||||||||||||||||||
Sbjct: 108 ggaatcggtcgataaacctctgcatcca 135
>46557_miR162:micropc
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttcc 28
||||| ||||||||||||||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||| ||||||||||||||||||||
Sbjct: 59 gaatcggtcgataaacctctgcatcca 85
>46026_miR162:micropc
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttcc 28
||||| ||||||||||||||||||||||
Sbjct: 2 tggatgcagcggttcatcgatctgttcc 29
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||| ||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatcca 86
>45416_miR162:micropc
Length = 139
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttcc 28
||||| ||||||||||||||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ggaatcgatcgataaacctctgcatcca 106
||||||| ||||||||||||||||||||
Sbjct: 112 ggaatcggtcgataaacctctgcatcca 139
>45338_miR162:micropc
Length = 112
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ggaatcgatcgataaacctctgcatcca 106
||||||||||||||| ||||||||||||
Sbjct: 85 ggaatcgatcgataagcctctgcatcca 112
>45279_miR162:micropc
Length = 114
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ggaatcgatcgataaacctctgcatcca 106
||||||||||||||| ||||||||||||
Sbjct: 86 ggaatcgatcgataagcctctgcatcca 113
>45197_miR162:micropc
Length = 139
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttcc 28
||||| ||||||||||||||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ggaatcgatcgataaacctctgcatcca 106
||||||| ||||||||||||||||||||
Sbjct: 112 ggaatcggtcgataaacctctgcatcca 139
>46792_miR162:micropc
Length = 83
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||| ||||||||||||||||||||
Sbjct: 57 gaatcggtcgataaacctctgcatcca 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttcc 28
||||| ||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctcttcc 28
>46456_miR162:micropc
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 cgatcgataaacctctgcatcca 106
|||||||||||||||||||||||
Sbjct: 66 cgatcgataaacctctgcatcca 88
>46096_miR162:micropc
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||| ||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatcca 86
>45757_miR162:micropc
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||| ||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatcca 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 cagcggttcatcgatctgtt 26
||||||||||||||||||||
Sbjct: 7 cagcggttcatcgatctgtt 26
>45617_miR162:micropc
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||| ||||||||||||||||||||
Sbjct: 61 gaatcggtcgataaacctctgcatcca 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 cagcggttcatcgatctgtt 26
||||||||||||||||||||
Sbjct: 8 cagcggttcatcgatctgtt 27
>45283_miR162:micropc
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 cgatcgataaacctctgcatcca 106
|||||||||||||||||||||||
Sbjct: 65 cgatcgataaacctctgcatcca 87
>44984_miR162:micropc
Length = 85
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||| ||||||||||||||||||||
Sbjct: 58 gaatcggtcgataaacctctgcatcca 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggattcagcggttcatcgatctgttcc 28
||||| ||||||||||||||||| ||||
Sbjct: 2 tggatgcagcggttcatcgatctcttcc 29
>44920_miR162:micropc
Length = 85
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcca 106
|||||| ||||||||||||||||||||
Sbjct: 59 gaatcggtcgataaacctctgcatcca 85
>45921_miR162:micropc
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 gatcgataaacctctgcatcca 106
||||||||||||||||||||||
Sbjct: 88 gatcgataaacctctgcatcca 109
>45508_miR162:micropc
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 gatcgataaacctctgcatcca 106
||||||||||||||||||||||
Sbjct: 87 gatcgataaacctctgcatcca 108