miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45957_miR169:micropc
Length = 110
Score = 218 bits (110), Expect = 6e-58
Identities = 110/110 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctcc 60
Query: 61 gtgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 110
>46573_miR169:micropc
Length = 109
Score = 216 bits (109), Expect = 3e-57
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctccg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctccg 60
Query: 62 tgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 110
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 109
>46292_miR169:micropc
Length = 109
Score = 216 bits (109), Expect = 3e-57
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctccg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctccg 60
Query: 62 tgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 110
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 109
>45092_miR169:micropc
Length = 109
Score = 216 bits (109), Expect = 3e-57
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctccg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctccg 60
Query: 62 tgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 110
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 109
>46378_miR169:micropc
Length = 127
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccgact 23
|||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccgact 23
>45596_miR169:micropc
Length = 127
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccgact 23
|||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccgact 23
>46837_miR169:micropc
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgact 23
||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccgact 22
>46631_miR169:micropc
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgact 23
||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccgact 22
>46208_miR169:micropc
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccgac 22
||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccgac 22
>45539_miR169:micropc
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgact 23
||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccgact 22
>44868_miR169:micropc
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccgac 22
||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccgac 22
>45932_miR169:micropc
Length = 94
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccga 21
|||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccga 21
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ttggcaagttgttcttggct 110
||||||||||||||||||||
Sbjct: 75 ttggcaagttgttcttggct 94
>45625_miR169:micropc
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgac 22
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccgac 21
>45442_miR169:micropc
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgac 22
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccgac 21
>46714_miR169:micropc
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>46708_miR169:micropc
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccga 21
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ttggcaagttgttcttggct 110
||||||||||||||||||||
Sbjct: 74 ttggcaagttgttcttggct 93
>46695_miR169:micropc
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccga 21
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ttggcaagttgttcttggct 110
||||||||||||||||||||
Sbjct: 74 ttggcaagttgttcttggct 93
>46644_miR169:micropc
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgactct 25
|||||||||||||||||| |||||
Sbjct: 2 agccaaggatgacttgcctactct 25
>46532_miR169:micropc
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccga 21
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ttggcaagttgttcttggct 110
||||||||||||||||||||
Sbjct: 74 ttggcaagttgttcttggct 93
>46455_miR169:micropc
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccga 21
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ttggcaagttgttcttggct 110
||||||||||||||||||||
Sbjct: 74 ttggcaagttgttcttggct 93
>46330_miR169:micropc
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>46294_miR169:micropc
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>46223_miR169:micropc
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>46177_miR169:micropc
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccga 21
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ttggcaagttgttcttggct 110
||||||||||||||||||||
Sbjct: 74 ttggcaagttgttcttggct 93
>46022_miR169:micropc
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>45996_miR169:micropc
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgactct 25
|||||||||||||||||| |||||
Sbjct: 1 agccaaggatgacttgcctactct 24
>45963_miR169:micropc
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>45912_miR169:micropc
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccga 21
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ttggcaagttgttcttggct 110
||||||||||||||||||||
Sbjct: 74 ttggcaagttgttcttggct 93
>45791_miR169:micropc
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccga 21
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ttggcaagttgttcttggct 110
||||||||||||||||||||
Sbjct: 74 ttggcaagttgttcttggct 93
>45747_miR169:micropc
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>45589_miR169:micropc
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgactct 25
|||||||||||||||||| |||||
Sbjct: 1 agccaaggatgacttgcctactct 24
>45529_miR169:micropc
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgactct 25
|||||||||||||||||| |||||
Sbjct: 2 agccaaggatgacttgcctactct 25
>45359_miR169:micropc
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>45348_miR169:micropc
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>45343_miR169:micropc
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>45254_miR169:micropc
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccga 21
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ttggcaagttgttcttggct 110
||||||||||||||||||||
Sbjct: 74 ttggcaagttgttcttggct 93
>45191_miR169:micropc
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 92 cagccaaggatgacttgccg 73
>45170_miR169:micropc
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>45101_miR169:micropc
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccga 21
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ttggcaagttgttcttggct 110
||||||||||||||||||||
Sbjct: 74 ttggcaagttgttcttggct 93
>45027_miR169:micropc
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>44882_miR169:micropc
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>44852_miR169:micropc
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>44839_miR169:micropc
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgactct 25
|||||||||||||||||| |||||
Sbjct: 2 agccaaggatgacttgcctactct 25
