miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>46275_miR535:micropc
          Length = 97

 Score =  192 bits (97), Expect = 3e-50
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgacgacgagagagagcacgcttgtagacaataatatgattttggacggttattacaacg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgacgacgagagagagcacgcttgtagacaataatatgattttggacggttattacaacg 60

                                               
Query: 61 tatttctgtgtacatgcgtgttctcgtcccgttgtca 97
          |||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatttctgtgtacatgcgtgttctcgtcccgttgtca 97




>45695_miR535:micropc
          Length = 79

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  tgacgacgagagagagcacgcttgt 25
          ||||||||||||||||||| |||||
Sbjct: 1  tgacgacgagagagagcacacttgt 25




>45565_miR535:micropc
          Length = 79

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  tgacgacgagagagagcacgcttgt 25
          |||| ||||||||||||||||||||
Sbjct: 1  tgacaacgagagagagcacgcttgt 25




>45543_miR535:micropc
          Length = 79

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  tgacgacgagagagagcacgcttgt 25
          |||| ||||||||||||||||||||
Sbjct: 1  tgacaacgagagagagcacgcttgt 25